Pungitius pungitius (ninespine stickleback): 119197312
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Entry
119197312 CDS
T07626
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119197312
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119197312
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
PRY
LRR_6
SPRY
NPHP3_N
LRR_4
Motif
Other DBs
NCBI-GeneID:
119197312
NCBI-ProteinID:
XP_062421549
LinkDB
All DBs
Position
11:complement(20037566..20046154)
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AA seq
1124 aa
AA seq
DB search
MNQAEDPEDSVPPTEAPLCGGHDRQTKAQRTNQRPEPVAGPDSEPGLRSGPEPSCVSMKS
NQSKEWPIVFKDGRPSADASSYQQRGKSPEPSCESMTSDWCKDVLNYFNGRRQPYDPEED
QKSLEVPTGQSAQQQQTHLDSIFMLLEGDILTFVKNELKKIQKVVCSGYPECLEMEDEEV
LDEELMRSREAFVKISVHFLRRMRQEELADRLQSRLLPADCQRELKSNLKKKFQSVFEGI
AKAGNKTLLNEIYTELYITEGGAAEVNQEHEVRQIETASWKRARPETTIRREDLFKASAG
GEEPIRTVMTKGVAGIGKTVLTQKFTLDWADDKDHQEIQFTFPFTFRELNVLREKKFSLV
GLVHHFFSEIRAAGICSFEEFQVVFIFDGLDECRLPLDFHNNEILTDVTESTSVDVLLTN
LIRGKLLPSARLWITTRPAAANQIPPKCIDMVTEVRGFTDTQKEEYFRKRFRDMKQSRRI
ISHIKSSQSLHIMCHIPVFCWITSTVLEEVLNTTELPKTLTEMYIHFLVVQSKRKKVKYD
EGAETDPLWSPENRKMIEALGKLAFDELQKGHLIFYESDLRECGINIRAASVYSGVFTQI
FREERGLYQDTVFCFVHLSVQEFLAALHVHLTFFNSGVNLLSEEQTTSLLSKAFGDKPEP
MRLYQSAVDKALQSPNGHLDLLLRFLLGFSQETNQTLLQGLLTGGCSLTNQETIHYIKER
ISEDVSPEKSINLFHCLNELNDGSLVEEIQQSLRSGRLSSDKLSPAQWSALVFILMSSQE
DLEVFDLKKYHASDEALLRLLPVVKASNKAQLSDCNLSERSCEVLSSVLSSQSSSLRELD
LSYNGLQDSGVKLLCDGLKSPHCDLETLSLSGCLITEEGFASLASALSSNPSHLRELDLS
YNHPGDSGVKLLSAGLEDPHWTLDTLRVEPAGVQWFRPGLMKYSCELTIDTNTVNRNLKL
SDNNRKVTHVEEEEEKEEENQSYPDHPDRFDFWPQLLCGTGLTGRCYWEVEWSGTVSISV
SYRGIKRKGSTRDCWFGYDDQSWCLRCSDEGYSVRHNKILTPITSSSSSSSGRVAVYVDC
PAGFLSFYRVSSDTLIHLHTFSTTFTEPLYPGFFVFVESSMSLC
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggctgaggacccagaggacagtgtccctcccactgaagcccctctgtgtggg
ggacatgacagacagaccaaagctcagaggaccaatcagagaccagagcctgtagctgga
cctgattctgaacctggtctgcgatcgggacctgaaccaagctgtgtgtccatgaagagt
aaccagtctaaggaatggcctatagtcttcaaagatggccgtccctctgctgatgcaagt
tcatatcagcagagaggaaagtctcctgaacccagctgtgagtccatgacgagtgattgg
tgtaaagatgttctaaattacttcaatggtcgacgccaaccttatgaccctgaagaagac
cagaagagcttggaggttcccacaggtcagtctgcccaacagcaacaaacacacctggac
tccatcttcatgttgctggagggggacatcctgacttttgtgaagaatgagctgaagaag
atccagaaggttgtgtgttctggttacccagaatgcttggagatggaggatgaagaggtg
ctggatgaagagctgatgaggagcagagaggcatttgtgaagatctcagtgcacttcctg
aggagaatgaggcaagaggagctggctgaccgtctgcagagcagacttcttcctgcagat
tgtcaacgtgaactcaaatccaacctgaagaagaagttccagtctgtgtttgagggcatc
gctaaagcaggaaacaaaacccttctgaatgagatctacacagagctctacatcacagag
ggaggggctgcagaggtcaatcaagaacatgaggtcaggcagattgaaacagcatcctgg
aaacgagccagaccagaaacaaccatcagacgagaagacctcttcaaagcctcagctgga
ggagaagaaccaatcagaacagtgatgactaagggagtggctggcattgggaaaacagtc
ttaacacagaagttcactctggactgggctgatgacaaagaccaccaggagatacagttt
acatttccattcaccttcagagagctgaatgttctgagagagaagaagttcagcttggtg
ggacttgttcatcacttcttcagtgaaatcagagcagcaggaatctgcagctttgaagag
ttccaggttgtgttcatctttgatggtctggatgagtgtcgacttcctctggacttccac
aacaatgagatcctgactgatgtcacagagtcgacctcagtggatgtgctcctcacaaac
ctcatcagggggaagctgcttccctctgctcgcctctggataaccacacgacctgcagca
gccaatcagatccctccgaagtgcattgacatggtgacggaggtcagagggttcaccgac
acccagaaggaggagtacttcaggaagaggttcagagatatgaagcagagccgcaggatc
atctctcacatcaagtcctcacaaagcctccacatcatgtgccacatcccagtcttctgc
tggatcacttctacggttcttgaggaagtgttgaacacaacagagctgcccaagaccctg
actgagatgtacatccacttcctggtggtccagtccaaaaggaagaaggtcaagtacgat
gaaggagccgagacggatccactctggagtccagagaacaggaagatgatcgaggctctg
ggaaaattggcctttgatgagctgcagaaaggccacctgatcttctatgaatctgacctg
agagagtgtggcatcaatatcagagcagcctcagtgtactcaggagtgttcactcagatc
ttcagagaggagagaggactgtaccaggacacggtgttctgcttcgtccatctgagtgtt
caggagtttctggctgctcttcatgttcatctgaccttcttcaactctggtgtcaatctg
ctgtcagaagaacaaacaacctccctgttgtctaaagcctttggggacaaacctgagcca
atgcgtctctaccagagtgctgtggacaaggccttacagagtcctaatggacacctggac
ttgctcctccgcttcctcctgggtttttcccaggagaccaatcagactctcctacaaggt
cttctgacaggaggttgctcactgaccaatcaggagacaatccactacatcaaggagagg
atcagtgaggatgtgtctccagagaaaagcatcaatctgttccactgtctgaatgaactg
aatgatggttctctagtggaggagatccaacagtcccttagatcaggacgtctctcctca
gataaactgtctcctgctcagtggtctgctctggtcttcatcttaatgtcatcacaggaa
gatctggaggtgtttgatctgaagaaatatcatgcgtcagatgaggctcttctgaggctg
ctgccagtggtcaaagcctccaacaaagctcaacttagtgactgtaacctctcagagaga
agctgtgaagttttgtcctcagtcctcagctcccagtcctctagtctgagagaactggat
ctgagctacaacggcctgcaggattcaggagtgaagctgctttgtgatggactgaagagt
ccacactgtgacctggagactctcagcctgtcaggctgtctgatcacagaggaaggcttt
gcttctctggcctcagctctgagctccaacccctcccacctgagagagctggacctgagc
tacaaccatccaggagactctggagtgaaacttctgtctgctggacttgaggatccacac
tggacactggacactctcagggtggagcctgctggagtccaatggttcagaccaggtctg
atgaagtattcctgtgaactcacaatcgacacaaacacagtaaacagaaacctcaaactg
tctgacaacaacaggaaggtgacacatgtggaggaggaggaagaaaaagaggaggagaat
cagtcatatcctgatcatccagacagatttgacttctggcctcagctgctgtgtggaact
ggtctgactggtcgctgttactgggaggtcgagtggagtggaacagtttctatatcagtg
agttacagaggaatcaagaggaaaggaagcactagagactgttggtttggatacgatgat
cagtcctggtgtctgagatgctctgatgaaggttactctgtccgtcacaataagatatta
acacctatcacctcctcctcctcctcctcctctggtagagtagcagtgtatgtggactgt
cctgctggctttctgtccttctacagagtctcctctgacacactgatccacctccacacc
ttcagcaccacattcactgaacctctttatcctgggttctttgtctttgttgagtcctct
atgtctctgtgttga
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