Pungitius pungitius (ninespine stickleback): 119197430
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Entry
119197430 CDS
T07626
Symbol
sema6e
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E isoform X1
KO
K06842
semaphorin 6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
119197430
NCBI-ProteinID:
XP_062421595
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Position
11:complement(17001127..17029520)
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AA seq
674 aa
AA seq
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MRRAPGSPGPVLPAVLALAVALLPGLCSGATPFPQDLEAISVVGRESSYLYPSFQGLLSD
NETVRLGLDFQRMLRINRMLYVAARDHVFAINLATSAEQIIPQQKLTWKTKDVEKCTVRG
KNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQEGEEVVGQARCPFESRQ
SNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYGN
YVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSF
FYFDVLQSLTNVLQINRRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFGGKFKEQRNSE
TAWTPVPEDQVPKPRPGCCAGEGSAAAHKSSTAFPDDTLTFIKSYPLMDESVPSVNDRPF
FTRTTSRFKLTQIAVDTSAGPSKNRTVVFLGSDNGRVLKILASTEGANASFSTQLLEDID
VYNPNKCNVQGEDRRVLGLELDRDHHALFVAFSGCVIRVPLSRCADYSGCRKSCLSSRDP
YCIWLKSGSCATIGPGFKGGFEQDVENGYHQHSETCHDVLATTRKQNPGLDSAYGKTTPT
SATTTYHAAAFPKEAGDPERGTGPDGPPAVGEQGSPDSEPISVEMEGKGGGMSVLSQPAG
GIALLGPECLVVRR
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgggcgcccggctcgcctggacccgtcctgccggccgtcctggccctcgccgtg
gccctcttgcctgggctgtgctcgggagccacgccgttcccccaggacctggaggccatc
agcgtcgtgggccgcgagtcctcctacctctaccccagcttccagggactcctgtcggac
aatgagaccgtgcgcctgggcctggacttccagaggatgctgaggatcaaccgcatgctc
tacgtcgccgcccgggaccacgtgtttgccatcaatcttgccacctcggcggagcagata
atcccacagcagaagctgacttggaagacgaaggatgtggagaagtgcaccgtgagaggg
aagaacagcgacgaatgttacaactacatcaaagtgctggtgccgcgcaacgacgagacg
ctcttcgcctgcggcaccaacgccttcaaccccacctgccggaactacaagatgtccaca
ctggagcaggagggcgaggaggtggtgggacaggcccgctgtcccttcgagtcccgccag
tccaacgtgggcctgttcgcaggtggcgatttctactcggccaccatgacggacttcttg
gcgagcgacgcggtgatctacagaagcctgggagagagcagccccgttctgcgcaccgtc
aagtacgactccaagtggctacgagagccccatttcctccacgccatcgagtacgggaac
tacgtgtacttcttcttcagcgagatcgcggtggagtacaccactctgggcaaggtggtc
ttctccagagtggcgcgcgtttgcaagaacgacaacggcggctcgccgagggttctggag
cgctactggacgtccttcctcaaagcccggctcaactgctcggtgccgggcgactccttc
ttctacttcgacgtgctgcagtcgctgaccaacgtgctgcagatcaaccgccggccggcc
gtgctcggcgtcttcaccacgcaggccaacagcatcacgggctcagcggtctgcgccttc
tacatggacgacatcgagaaggccttcgggggcaaattcaaagagcagaggaacagcgag
acggcgtggacacctgtcccggaggaccaggtcccgaagcccaggccgggatgctgcgcc
ggcgagggctcggcggcggcccacaagtcgtccaccgccttccccgacgacaccctgacc
ttcatcaagtcgtacccgctcatggacgagtccgtcccctccgtcaacgaccggcccttc
ttcacccgcaccaccagcagattcaagttgacccagatagcggtggacacgtcggcgggg
ccgtccaagaaccgcacggtggtgttcctgggctcggacaacgggcgcgtgctgaagatc
ctggccagcacggagggggccaacgcgtccttcagcacgcagctcctggaggacatcgac
gtctacaaccccaacaaatgcaacgtgcagggggaggacaggagggtgctgggtctggag
ctggatcgggaccaccacgcgctcttcgtggcgttctccggctgcgtgatccgcgtgccg
ctgagccgctgcgccgactacagcggctgcaggaaaagctgtctgtcttcacgggaccct
tactgcatctggcttaagtcaggcagctgtgcaacgatcggcccgggcttcaagggcggc
tttgaacaggatgtggagaacggttaccatcagcactctgaaacctgccacgatgtcctg
gcgaccactcgcaagcaaaacccggggctggattcggcgtacgggaagaccacacccaca
agcgccaccacaacctatcacgcggcggcgttccctaaggaggcaggtgaccctgaaaga
ggtacaggtcctgacggcccccccgccgtgggggagcaagggtcacctgactcggagcca
atcagtgtggagatggagggtaaggggggagggatgtccgtcctcagtcaacctgcaggg
gggattgcactgctgggccccgaatgcctcgtcgtacgccgctaa
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