Pungitius pungitius (ninespine stickleback): 119197515
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Entry
119197515 CDS
T07626
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119197515 (sntb1)
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GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119197515
NCBI-ProteinID:
XP_037309787
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Position
11:9493727..9521492
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AA seq
555 aa
AA seq
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MAVVITTGVSGVSGVQKSGFLDVLVREHWHKVLVNLNEEALTLSCEEGCDPDDADDSVTS
NGLTNGSYLGNNNANSNNGPQAARTAFTDLPERVPEAIANRKRCVKVTKQEIGGLGVSIK
GGKENKMPILISKIFKGLAADQTQALYVGDAILSVNSVNLRDATHDEAVQALKRAGKEVT
LEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGSPTIFSSSSSFCPSDSPSSPSMPSL
SLQGDRRCIPLKMCCVTRAMTTPDPENRQLELHSPDARHTVVLRCPDQPSALSWFSAMHS
VTSKLAKQALSEVIHSTTRTDVAGSKEIRHLGWLAGKTESEKQCWKPLLVVVTEKDLLLY
ESLPRGKEAWQSPAHQYPLLATRLVHSGPDRGSPHSGTELFFATRTGTRLGIETHLFRAE
TSKDLSLWTRQLVNGCHASAEMIKEVTTSCLYQSQECRLVIHYEQGFSVLADPKLGEGEN
REEGGAHTPTRPQVLLSYPYEQLKMSSDDGVRMLFLDFGGEEGEIQLDLHSCPKPIVFIL
HSFLSAKIYRLGLVA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtaataacgacgggagtttcaggtgtctccggagtacaaaaaagtggattt
cttgatgttttggtgcgggaacattggcacaaagttttggtcaacttaaacgaggaagcg
ctcacgttaagctgcgaggagggctgcgatccagacgacgcggacgacagcgtcacctcc
aacggtctcaccaacgggtcttaccttggcaacaataacgccaactccaacaacggcccc
caagccgcgcgcactgcgttcacggacctcccggagcgagtgccagaggccatcgccaac
cgaaagcgctgcgttaaggtgaccaagcaagagatcgggggactcggcgtcagcatcaaa
ggtgggaaggagaataaaatgcccatcctcatcagcaagatattcaagggactcgcggcg
gaccagacccaggctctgtacgtcggagacgccattctgtccgtgaacagtgtgaacctg
cgggacgcgacccacgacgaggctgtgcaggcgctgaaacgggccgggaaagaggtgaca
ctggaagtgaagtacatgcgtgaggccacgccatacgtcaaaaaaggctccccagtgtca
gagatcggctgggaaaccccacctccggagtctcctcgcctcggcagcccgaccatcttc
tcctcttcctcctccttctgcccatctgactctcccagctctccttccatgccctctctg
tccctccagggggacaggaggtgcataccactcaagatgtgttgtgtaactcgagccatg
accacaccagaccctgagaacagacaactggagctgcactccccagacgccaggcacacc
gtggtgctgaggtgcccggaccagccgtctgccctatcctggttctctgccatgcattct
gtcacatccaaactggcaaagcaggcactatcagaggtcatccacagcacaaccaggacg
gatgtagctggcagcaaagagatacggcacctgggatggctggcagggaagacagagagt
gagaagcaatgctggaagccgctgctggtggtggtgacagagaaagacctactgctgtat
gagagtctaccacgaggcaaggaagcatggcagagccctgcacaccagtatccactttta
gcaacccgtttggtccactcaggccctgaccgggggtcgccacactccggcacagagctt
ttctttgccactcggactggcacaagactcggcatcgagactcatctgttccgggcggag
acctccaaggatctgtccctgtggaccagacaactagtcaacggatgtcacgcgtcagct
gagatgatcaaagaagtcacgacaagttgtctataccagagccaggagtgccggctggtg
attcactacgagcagggattctccgtgctggctgaccccaaactgggagaaggtgaaaat
agggaggagggaggggctcacacacccaccaggcctcaggtgctcctgtcctacccctac
gaacaactaaagatgtcctcggatgatggcgttcgcatgctcttcctcgactttggaggc
gaggaaggggagattcaactggacctccactcttgtccaaagccgattgtcttcatcctc
cactccttcctctctgctaagatctaccgtctgggtctggtggcctga
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