Pungitius pungitius (ninespine stickleback): 119197563
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Entry
119197563 CDS
T07626
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119197563
Membrane trafficking [BR:
ppug04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119197563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
SPA
PPR
DUF2464
Motif
Other DBs
NCBI-GeneID:
119197563
NCBI-ProteinID:
XP_037309877
LinkDB
All DBs
Position
11:18864234..18881740
Genome browser
AA seq
1513 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLDPAGAWSPLDEDAKTPTSSCSTSSSCSTSTSSSRAVESVTDL
AVIARGLGEEVPEGFTCIERTLGGHSAELSAGLISNPHMYLCYRRGRDKPPILDLGVLYE
GKEQLKQSWDVIDTTPYSRSANLSSGGGPTAHRVFLTFRRALDSQGLHMLGVTDIGLLMP
SKGEVAPHTFCRVDKNLNTGMWGPALYVCFKRAVAKANALLYKASLISRYPEEDLEAFPL
PESVPVFCLPMGVTVESWPLSTKYQLPVFSTFVLTSASGDKVYGAAIQFYESFSQELLSE
RQSVRLGLLSVVDRRPITSRSLQVKKSICVLSHWPFFTVFQKFLTFVYRYSVSGPHVLPL
EKHVSSFMHNVPFPSPQRPRILVQLSPYDNLVLCQPVSSPLPLSGASFLKLLQNLGPENS
CTLLLAVLTEHKLLLHSLRADVLTSVSEALVSMSFPLRWLCPYIPLCPLQMADVLLAPMP
FIVGVHSSYFDLYDPPTDVVCVDLDTNTIFQSDDKKPLSWRSLPRKHGKTLFNTLTGLHK
TLEKICTPGQEEATLEFLLTDYDQIYRSQKQLELEIQEAFLRFMSCLLKGYRSFLLPITQ
APSDTTTDCSSLFNLQGFLKSRDRTQQKIYSQLTRTQMFTQFIEECSFVSDRHACLEFFD
ECVQKVDVEKPEEVRLIDLDETHSGEHTVFIMPPEEPQEPDGSECPALYSYETFPTLKPE
LFERPQDQLRVPKKGSAPNSPAPHRTKQEIKLAQKRAQKYSAVPDMWSKCLLGHCYGLWF
IYLPTFVRAEGAKVRALHAAYDVLKHMENRKVVLPDEVCYRILMQLCGQYGQPVLAVRVL
LEMKKAGITPNTITYGYYNKAVLESKWPSTNQGGRLRWAKLRNVLLAVAQFRQPIKRQHH
SGSVGSQEEVTTDPDQRLLPHSALIRQSSWSGLSESSSHESLTGSFVKSSSLSSMSIPSE
KVKLCRKTFLRHTGTNGCSDSASCKPPMGLSHTSTPPTAPPGDLLVRRSQVCLSTFYREC
AESAESEPDCSCQPAKRDGRPAGTRDSAGRNKAVDENYNNVSPSRGGLAGKLQQLLTPTR
HRTSGRRAASVDDRRPGGRGGAIGRRVSEQRQSRKAQVAETLLKAKERLVSATSESSLSL
GSDLDLTDTPSPAFPFQKSWDTNQQGTGLEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDS
NLNSSCPFCCASFVPFLNAEVCDLGPVVSAEPTNWNVEDKVGSAVRPPSDQELKNQCNGL
SEDSSSETSSYSENSRTTMASSLGGSPQVTVAYLSPLVLRKELESLLENEGEAVLAQPQF
LENHSIIFWNLVWYFQRLGLPSNLLQLVQASPLISQFTQTENSAVRVRLLWDTLTPDTDQ
WPPLYILWRIHSGVPMRSYSWRRHNHPFTLSFLEEVLRWIGMNEVHKAVALYLDTLEKMQ
GAWTQRSLYREFLFLTLAAMGKDHVAAFDKKYKAAYSRLIGSVGREELRKKRAQPPGPKA
VDCRRSFYPPLEC
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgtccccagctggtggactacttcgtagtagcaggtctcgaccct
gcgggggcctggagccccctggacgaggatgccaagacccccacctcctcctgctccacc
tcctcctcctgctccacctccacctcctcctcccgagcggtggagtcggtgacagacctg
gcggtgatagcccgggggctcggggaggaggtgccggagggcttcacctgcatcgagagg
acgctgggcggacactcggccgagctgagcgccggcctcatcagcaaccctcacatgtac
ctgtgctaccggaggggccgggacaagccgcccatcctggacctgggagttctgtatgaa
ggaaaggaacagttgaagcagagctgggacgtcatcgacacgacgccctacagccgatcg
gccaacctgagctccggcggcggcccgacagctcaccgggttttcctgacgttccggcgc
gctctggactcgcagggcctccacatgctgggcgtcacagacatcggtctgctgatgccc
agcaaaggagaagtcgccccgcacaccttctgtcgagtggacaagaatctcaacactggc
atgtggggtccagctttgtacgtgtgcttcaagagagctgtggccaaagccaacgccctg
ctctacaaagctagtctgatcagccgctacccggaggaggacctggaggcctttcctctg
ccggagtcggtgcccgttttctgtctcccaatgggcgtcaccgtggagagctggcctctg
agcaccaagtaccagctgcccgtcttctccaccttcgtcctcacctctgcttccggggat
aaggtctacggagcagccatccagttctacgagtctttctcccaggagctgctgtcggag
cggcagagcgtgaggctgggcctgctcagcgttgtggaccggaggcccatcaccagccgc
agcctgcaggtgaagaagagcatctgcgtgctctcccactggcccttcttcaccgtcttc
cagaagttcctgaccttcgtctaccgatactccgtctccggaccccacgtcctgccgctg
gagaaacatgtctccagcttcatgcacaacgtcccgtttccctccccccagcgaccccgc
atcctcgttcagctctctccatatgacaacctggttctctgccagcctgtttcctctccg
ctgcctctcagcggggccagcttcctgaagctcctccagaacctcggcccagagaactcg
tgcacgttgctgctcgccgtgctaacagaacacaaactgctgctccactcgctgcgagcc
gacgtcctgacctccgtcagcgaggccctcgtctccatgagcttccccctgcgctggctg
tgtccctacatccctctgtgtccactgcagatggctgatgtccttctggctccaatgccg
ttcatagtgggggtccactctagttactttgacctgtacgacccccctactgacgtggtg
tgtgtggacctggacaccaacaccatcttccagtcggacgacaagaagccgctgtcatgg
cgatcgttacccaggaaacacggcaagactctgttcaataccctcactggcctccacaag
accctggagaagatctgcacccccggccaggaggaggccacgctggagttcctgctgact
gactacgatcagatctacaggagtcagaagcagctggagctggagatccaggaagccttc
cttcgattcatgagctgcctgctgaagggctaccggagcttcctgcttcccatcactcag
gctccttccgacaccaccacagactgcagctccctcttcaacctgcagggcttcctgaag
tctcgggaccgaacccagcaaaagatctacagccagctgactaggacccagatgttcact
cagttcatcgaggagtgctccttcgtcagtgaccgacacgcctgcctcgagttcttcgac
gagtgtgtccaaaaggtggacgtggagaagccagaggaagtaaggctgatcgatctggat
gagactcacagcggagaacacaccgtcttcattatgccccccgaagaaccacaggaaccc
gacgggtccgaatgtccagctctttacagttatgaaacttttcccactctaaagccggag
ctcttcgaacggccacaagatcaactccgggttccaaagaagggcagcgcccccaatagc
cccgccccccaccgaaccaaacaggagatcaagctggcccagaagcgagctcagaagtac
tctgcagtgccagacatgtggtccaagtgcctgctgggtcactgctacgggctgtggttc
atctacctgcccaccttcgtgcgggcggagggcgctaaggtgcgtgcgctgcacgcggca
tacgatgtcctcaagcacatggagaacaggaaggtggtgctacctgacgaggtgtgttac
aggatcctcatgcagctctgtggtcagtacggccagccggttctggctgtgagggttcta
ctggagatgaagaaagctggaatcacaccgaataccatcacctacggatactacaacaag
gcggtgctggagagtaagtggccctcgaccaatcagggaggacgtctccgctgggccaag
ctgaggaacgtcctattggctgtggctcagttcaggcagccaatcaaacgtcagcaccac
agcggctcggtggggtcacaggaagaagtgacgacggaccccgatcagaggcttctccca
cactccgctctgatccgtcagtccagctggagcggcctgtccgagagctccagtcacgag
tctctgacgggttcgtttgtgaagagcagcagcctgagcagcatgagcatcccaagcgag
aaggtgaagctttgtcggaagaccttcctccgtcacactgggaccaacggctgcagcgac
tctgcctcctgtaagcctccgatggggctctcccacacctccacccctcctaccgccccg
cccggggacctcctggtgcggcggagtcaggtctgcctttccaccttctacagagaatgt
gcagagtcggctgaatctgagccggattgcagctgccagccggcaaagagagacggcaga
cccgccgggacgcgagactcagccggcagaaacaaagcggtagacgagaactacaacaac
gtgtcccccagccgaggaggtctggccgggaagctccagcagctgctcactcccaccaga
caccgaacgtctgggagacgagccgccagcgtggacgaccggaggccaggaggaagagga
ggagccataggacgaagggtgtccgagcagaggcagtccaggaaggctcaggtggccgag
acgctgctgaaggccaaggagcggctggtcagcgccacctccgagagttctttgtctcta
ggaagtgacctggacttgacagacactccaagtccagcgtttcctttccaaaagtcctgg
gacaccaaccagcaggggacgggtctcgaggtgctgatgtccagctgctccctgtgtcgt
agctgtaactcgttggtctacgacgaggagatcatggctggctggacctccgacgactca
aacctcaattcctcctgccccttctgctgcgcctccttcgtccccttcctgaacgctgag
gtctgtgacctcggacctgtggtcagtgcggagcctaccaactggaacgtggaggacaag
gtggggagcgctgtgaggcctcccagcgatcaggagctgaagaaccagtgtaacggtctg
agtgaagactccagctctgagaccagcagctactcggagaacagcagaaccaccatggcc
tcctcattgggcggctctccccaggtgacagtggcttacctgagccctctggtcctgagg
aaggagctggaaagcctgctagagaacgagggggaggcggtcctcgcccagcctcaattc
ctggagaaccactccatcatcttctggaacctggtgtggtacttccagcgcctcggcctg
cccagtaatctgctgcagctggtccaggcctcgccactgatcagccagttcacccagaca
gagaattcagcagtcagagtgcggctcctctgggacaccttgacccccgacacagaccag
tggccccccctctacatactctggagaatccacagtggcgtcccaatgaggagctacagc
tggcggagacacaaccacccattcacgctctccttcttagaggaggtgctgcgctggatc
ggcatgaacgaggtgcacaaagcggtcgccctctacctggacacgctggaaaaaatgcag
ggggcctggactcagaggagtttgtacagagagttcttgttcctcacattggcagctatg
ggcaaagatcacgttgcagcctttgataaaaagtacaaggcggcgtactctcggctcatc
ggctccgtgggacgagaggagctccgtaagaagcgagcgcagcctccaggacccaaagcc
gtggactgcagacgcagcttctacccgcctctcgagtgctaa
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