Pungitius pungitius (ninespine stickleback): 119197563
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Entry
119197563 CDS
T07626
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119197563
Membrane trafficking [BR:
ppug04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119197563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
SPA
PPR
DUF2464
Motif
Other DBs
NCBI-GeneID:
119197563
NCBI-ProteinID:
XP_037309877
LinkDB
All DBs
Position
Unknown
AA seq
1511 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLDPAGAWSPLDEDAKTTTSSCSTSSSCSTSSSRAVESVTDLAV
IARGLGEEVPEGFTCIERTLGGHSAELSAGLISNPHMYLCYRRGRDKPPILDLGVLYEGK
EQLKQSWDVIDTTPYSRSANLSSGGGPTAHRVFLTFRRALDSQGLHMLGVTDIGLLMPSK
GEVAPHTFCRVDKNLNTGMWGPALYVCFKRAVAKANALLYKASLISRYPEEDLEAFPLPE
SVPVFCLPMGVTVESWPLSTKYQLPVFSTFVLTSASGDKVYGAAIQFYESFSQELLSERQ
SVRLGLLSVVDRRPITSRSLQVKKSICVLSHWPFFTVFQKFLTFVYRYSVSGPHVLPLEK
HVSSFMHNVPFPSPQRPRILVQLSPYDNLVLCQPVSSPLPLSGASFLKLLQNLGPENSCT
LLLAVLTEHKLLLHSLRADVLTSVSEALVSMSFPLRWLCPYIPLCPLQMADVLLAPMPFI
VGVHSSYFDLYDPPTDVVCVDLDTNTIFQSDDKKPLSWRSLPRKHGKTLFNTLTGLHKTL
EKICTPGQEEATLEFLLTDYDQIYRSQKQLELEIQEAFLRFMSCLLKGYRSFLLPITQAP
SDTTTDCSSLFNLQGFLKSRDRTQQKIYSQLTRTQMFTQFIEECSFVSDRHACLEFFDEC
VQKVDVEKPEEVRLIDLDETHSGEHTVFIMPPEEPQEPDGSECPALYSYETFPTLKPELF
ERPQDQLRVPKKGSAPNSPAPRRTKQEIKLAQKRAQKYSAVPDMWSKCLLGHCYGLWFIY
LPTFVRAEGAKVRALHAAYDVLKHMENRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLE
MKKAGITPNTITYGYYNKAVLESKWPSTNQGGRLRWAKLRNVLLAVAQFRQPIKRQHHSG
SVGSQEEVTTDPDQRPLPHSALIRQSSWSGLSESSSHESLTGSFVKSSSLSSMSIPSEKV
KLCRKTFLRHTGTNGCSDSASCKPPMGLSHTSTPPTAPPGDLLVRRSQVCLSTFYRECAE
SAESEPDCSCQPAKRDGRPAGTRDSAGRNKAVDENYNNVSPSRGGLAGKLQQLLTPTRHR
TSGRRAASVDDRRPGGRGGAIGRRVSEQRQSRKAQVAETLLKAKERLVSATSESSLSLGS
DLDLTDTPSPAFPFQKSWDTNQQGTGLEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNL
NSSCPFCCASFVPFLNAEVCDLGPVVSAEPTNWNVEDKVESAVRPPSDQELKNQCNGLSE
DSSSETSSYSENSRTTMASSLGGSPQVTVAYLSPLVLRKELESLLENEGEAVLAQPQFLE
NHSIIFWNLVWYFQRLGLPSNLLQLVQASPLISQFTQTENSAVRVRLLWDTLTPDTDQWP
PLYILWRIHSGVPMRSYSWRRHNHPFTLSFLEEVLRWIGMNEVHKAVALYLDTLEKMQGA
WTQRSLYREFLFLTLAAMGKDHVAAFDKKYKAAYSRLIGSVGREELRKKRAQPPGPKAVD
CRRSFYPPLEC
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgtccccagctggtggactacttcgtagtagcaggtctcgaccct
gcgggggcctggagccccctggacgaggatgccaagaccaccacctcctcctgctccacc
tcctcctcctgctccacctcctcctcccgagcggtggagtctgtgacagacctggcggtg
atagcccgggggcttggggaggaggtgccggagggcttcacctgcatcgagaggacgctg
ggcggacactcggccgagctgagcgccggcctcatcagcaaccctcacatgtacctgtgc
taccggaggggccgggacaagccgcccatcctggacctgggagttctgtatgaaggaaag
gaacagttgaagcagagctgggacgtcatcgacacgacgccctacagccgatcggccaac
ctgagctccggcggcggcccgacagctcaccgggttttcctgacgttccggcgcgctctg
gactcgcagggcctccacatgctgggcgtcacagacatcggtctgctgatgcccagcaaa
ggagaagtcgccccgcacaccttctgtcgagtggacaagaatctcaacactggcatgtgg
ggtccagctttgtacgtgtgcttcaagagagctgtggccaaagccaacgccctgctctac
aaagctagtctgatcagccgctacccggaggaggacctggaggcctttcctctgccggag
tcggtgcccgttttctgtctcccaatgggcgtcaccgtggagagctggcctctgagcacc
aagtaccagctgcccgtcttctccaccttcgtcctcacctctgcttccggggataaggtc
tacggagcagccatccagttctacgagtctttctcccaggagctgctgtcggagcggcag
agcgtgaggctgggcctgctcagcgttgtggaccggaggcccatcaccagccgcagcctg
caggtgaagaagagcatctgcgtgctctcccactggcccttcttcaccgtcttccagaag
ttcctgaccttcgtctaccgatactccgtctccggaccccacgtcctgccgctggagaaa
catgtctccagcttcatgcacaacgtcccgtttccctccccccagcgaccccgcatcctc
gttcagctctctccatatgacaacctggttctctgccagcctgtttcctctccgctgcct
ctcagcggggccagcttcctgaagctcctccagaacctcggcccagagaactcgtgcacg
ttgctgctcgccgtgctaacagaacacaaactgctgctccactcgctgcgagccgatgtc
ctgacctccgtcagcgaggccctcgtctccatgagcttccccctgcgctggctgtgtccc
tacatccctctgtgtccactgcagatggctgatgtccttctggctccaatgccgttcata
gtgggggtccactctagttactttgacctgtacgacccccctactgacgtggtgtgtgtg
gacctagacaccaacaccatcttccagtcggacgacaagaagccgctgtcatggcgatcg
ttacccaggaaacacggcaagactctgttcaataccctcactggcctccacaagaccctg
gagaagatctgcacccccggccaggaggaggccacgctggagttcctgctgactgactac
gatcagatctacaggagtcagaagcagctggagctggagatccaggaagccttccttcga
ttcatgagctgcctgctgaagggctaccggagcttcctgcttcccatcactcaggctcct
tccgacaccaccacagactgcagctccctcttcaacctgcagggcttcctgaagtctcgg
gaccgaacccagcaaaagatctacagccagctgactaggacccagatgttcactcagttc
atcgaggagtgctccttcgtcagtgaccgacacgcctgcctcgagttcttcgacgagtgt
gtccaaaaggtggacgtggagaagccagaggaagtaaggctgatcgatctggatgagact
cacagcggagaacacaccgtcttcattatgccccccgaagaaccacaggaacccgacggg
tccgaatgtccagccctttacagttatgaaacttttcccactctaaagccggagctcttc
gaacggccacaagatcaactccgggttccaaagaagggcagcgcccccaatagccccgcc
ccccgccgaaccaaacaggagatcaagctggcccagaagcgagctcagaagtactctgca
gtaccagacatgtggtccaagtgcctgctgggtcactgctacgggctgtggttcatctac
ctgcccaccttcgtgcgggcggagggcgctaaggtgcgtgcgctgcacgcggcatacgat
gtcctcaagcacatggagaacaggaaggtggtgctacctgacgaggtgtgttacaggatc
ctcatgcagctctgtggtcagtacggccagccggttctggctgtgagggttctactggag
atgaagaaagctggaatcacaccgaataccatcacctacggatactacaacaaggcggtg
ctggagagtaagtggccctcgaccaatcagggaggacgtctccgctgggccaagctgagg
aacgtcctattggctgtggctcagttcaggcagccaatcaaacgtcagcaccacagcggc
tcggtggggtcacaggaagaagtgacgacggaccccgatcagaggcctctcccacactcc
gctctgatccgtcagtccagctggagcggcctgtccgagagctccagtcacgagtctctg
acgggttcgtttgtgaagagcagcagcctgagcagcatgagcatcccaagcgagaaggtg
aagctttgtcggaagaccttcctccgtcacactgggaccaacggctgcagcgactctgcc
tcctgtaagcctccgatggggctctcccacacctccacccctcctaccgccccgcccggg
gacctcctggtgcggcggagtcaggtctgcctttccaccttctacagagaatgtgcagag
tcggctgaatctgagccggattgcagctgccagccggcaaagagagacggcagacccgcc
gggacgcgagactcagccggcagaaacaaagcggtagacgagaactacaacaacgtgtcc
cccagccgaggaggtctggccgggaagctccagcagctgctcactcccaccagacaccga
acgtctgggagacgagccgccagcgtggacgaccggaggccaggaggaagaggaggagcc
ataggacgaagggtgtccgagcagaggcagtccaggaaggctcaggtggccgagacgctg
ctgaaggccaaggagcggctggtcagcgccacctccgagagttctttgtctctaggaagt
gacctggacttgacagacactccaagtccagcgtttcctttccaaaagtcctgggacacc
aaccagcaggggacgggtctcgaggtgctgatgtccagctgctccctgtgtcgtagctgt
aactcgttggtctacgacgaggagatcatggctggctggacctccgacgactccaacctc
aattcctcctgccccttctgctgcgcctccttcgtccccttcctgaacgctgaggtctgt
gacctcggacctgtggtcagtgcggagcctaccaactggaacgtggaggacaaggtggag
agcgctgtgaggcctcccagcgatcaggagctgaagaaccagtgtaacggtctgagtgaa
gactccagctctgagaccagcagctactcggagaacagcagaaccaccatggcctcctca
ttgggcggctctccccaggtgacagtggcttacctgagccctctggtcctgaggaaggag
ctggaaagcctgctcgagaacgagggggaggcggtcctcgcccagcctcaattcctggag
aaccactccatcatcttctggaacctggtgtggtacttccagcgcctcggcctgcccagt
aatctgctgcagctggtccaggcctcgccactgatcagccagttcacccagacagagaat
tcagcagtcagagtgcggctcctctgggacaccttgacccccgacacagaccagtggccc
cccctctacatactctggagaatccacagtggcgtcccaatgaggagctacagctggcgg
aggcacaaccacccattcacgctctccttcttagaggaggtgctgcgctggatcggcatg
aacgaggtgcacaaagcggtcgccctctacctggacacgctggaaaaaatgcagggggcc
tggactcagaggagtttgtacagagagttcttgttcctcacattggcagctatgggcaaa
gaccacgttgcagcctttgataagaagtacaaggcggcgtactctcggctcatcggctcc
gtgggacgagaggagctccgtaagaagcgagcgcagcctccaggacccaaagccgtggac
tgcagacgcagcttctacccgcctctcgagtgctaa
DBGET
integrated database retrieval system
