Pungitius pungitius (ninespine stickleback): 119197589
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Entry
119197589 CDS
T07626
Name
(RefSeq) protein NLRC3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119197589
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119197589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
FISNA
NLRC4_HD2
NACHT
LRR_1
NOD2_WH
PRY
LRR_4
SPRY
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
119197589
NCBI-ProteinID:
XP_062421582
LinkDB
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Position
11:complement(19489790..19502720)
Genome browser
AA seq
1082 aa
AA seq
DB search
MNQAEDPEDSVPPSEAPLCGGHDRQTKAQRTHQRPGPAPGPSCVSMKSNQSMEPPMKFKD
VRPSADARSHQQRRKSPEPSCVSMKSHQSEGRWIDFKDDQSNGHLVNFKDGDCSYDPEED
QESSEVPTGQSDLRRREQEELAERLQSSLLPVDCQRELKSNLKKRFQSVFEGITKAGNPT
LLNEIYTELFITEGGTAEVNQEHEVRQIETASRRPARPETTIRLEDLLKASAGGEKPIRT
VMTKGVAGIGKTVLTQKFTLDWAEHKDHQDIQFTFPFTFRELNVLREKKFSLVGLVHHFF
SETRAAGICRFEEFQVVFIFDGLDECRLPLDFHNNEILTDVTETSSVDVLLTNLIRGKLL
PSARLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRIRDEEQASSIISHIKTS
RSLHIMCHIQVFCWITATVLEVLKTREGGELPKTLTEMYIHFLVVQSKVKKVKYDGGAET
DPHWSPESRKMIESLGKLAFDQLQKGHLIFYESDLTECGIDIKAASVCSGVFTQIFREER
GLYQDMVFCFVHLSVQEFLAALHVHLTFFSSGVNLLSGEQTPSRWSKRLKPNPEPIHLYQ
SAVDKALKSPNGHLDLFLRFLLGLSLETNQGLLQGLLTQTGSRSQTHETSVQYIKKKISK
NVSPEKSINLFHCLNELNDVSLVEEIQQSLRSGRLSSDELSPAQWSALVFILLSSQEDLE
VFDLKKYRASDEALLRLLPVVKASNKAQLSDCNLSQRSCEALSSVLSSQSSSLRELDLSN
NGLQDSGVKLLCDGLKSPHCDLETLRLSDCNLSERSCEALSSVLSSQSSSLRELDLSYNG
LQDSGVTLLCEGLKSPHCDLETLRLSGCLITEDGCASLVSALSSNPSHLRELDLSYNHPG
DSGVKMLSAGVKDPHWRLETLRVEPAGVQWFRPGLRKYSCELTIDTNTVNRNLQLSDNNK
KVTRVWEEDQSHPDHPDRFDFWPQLLCRTGLTGRCYWEVEWTGPLVPQCLCVLFRTESLL
LVENLPLCSPHSSVCTADGGSGAGGAGEGYLSWSGLWGSTALWVSDGRVKELSLMLLCSL
NQ
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggctgaggacccagaggacagtgtccctccctctgaagcccctctgtgtggg
ggacatgacagacagaccaaagctcagaggacccatcagagaccaggacctgcacctgga
cccagctgtgtgtccatgaagagtaaccagtctatggagcctcctatgaaattcaaagat
gtccgtccctctgctgatgcaaggtcacatcagcagagaagaaagtctcctgaacccagc
tgtgtgtccatgaagagtcatcagtctgaaggtcgatggatcgacttcaaagatgatcag
tctaatggtcatctagtgaacttcaaagatggagactgttcttatgaccctgaagaagac
caggagagctcagaggttcccacaggtcagtctgacctgaggagaagggagcaggaggag
ctggctgaacgtctgcagagcagtcttcttcctgtagattgtcagcgtgaactcaaatcc
aacctgaagaagaggttccagtctgtgtttgagggcatcactaaagcaggaaacccaacc
cttctgaatgagatctacacagagctcttcatcacagagggagggactgcagaggtcaat
caagaacatgaggtcagacagattgaaacagcatccaggagaccagccagaccagaaaca
accatcagactagaagacctcctcaaagcctcagctggaggagaaaaaccaatcagaaca
gtgatgactaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctg
gactgggctgaacacaaagaccaccaggacatacagttcacatttccattcaccttcaga
gagctgaatgtgctgagagagaagaagttcagcttggtgggacttgttcatcacttcttc
agtgaaaccagagcagcaggaatctgcaggtttgaggagttccaggttgtgttcatcttt
gacggtctggatgagtgtcgacttcctctggacttccacaacaatgagatcctgactgat
gtcacagagacctcctcggtggatgtgctcctcacaaacctcatcagggggaagctgctt
ccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgag
tgtgttgacatggtgacagaggtcagagggttcaccgacccccagaaggaggagtacttc
aggaagaggatcagagatgaggagcaggccagcagcatcatctcccacatcaagacctca
cgaagcctccacatcatgtgccacatccaagtcttctgctggatcactgctacagttctg
gaggtgttgaagaccagagaaggaggagagctgcccaagaccctgactgagatgtacatc
cacttcctggtggttcagtccaaagtgaagaaggtcaagtacgatggaggagctgagacg
gatccacactggagtccagagagcaggaagatgatcgagtctctgggaaaactggccttt
gatcagctgcagaaaggtcacctgatcttctatgaatccgacctgacagagtgtggcatc
gatatcaaagcagcctcagtgtgctcaggagtgttcactcagatcttcagagaggagaga
ggactgtaccaggacatggtgttctgcttcgtccatctgagtgttcaggagtttctggct
gctcttcatgtccatctgaccttcttcagctctggtgtcaatctgctgtcaggagaacaa
acaccctcccggtggtctaaacgcttaaaacccaatcctgaaccaatacatctctaccag
agtgctgtggacaaggccttaaagagtcctaatggacacctggacttgttcctccgcttc
ctcctgggtctttccctggagaccaatcagggtctcctacaaggtctgctgacacagaca
ggaagtcgctcacagacccatgagacatcagtccagtacatcaagaagaagattagtaag
aatgtgtctccagagaaaagcatcaatctgttccactgtctgaatgaactgaatgatgtt
tctctagtggaggagatccaacagtcccttagatcaggacgtctctcctcagatgaactg
tctcctgctcagtggtcagctctggtcttcatcttactgtcatcacaggaagatctggag
gtgtttgacctgaagaaatatcgtgcatcagatgaggctcttctgaggctgctgccagtg
gtcaaagcctccaacaaagctcaactgagtgactgtaacctctcacagagaagctgtgaa
gctctgtcctcagtcctcagctcccagtcctctagtctgagagaactggatctgagtaac
aacggcctgcaggattcaggagtgaagctgctgtgtgatggactgaagagtccacactgt
gacctggagactctcagactgagtgactgtaacctctcagagagaagctgtgaagctctg
tcctcagtcctcagctcccagtcctctagtctgagagaactggatctgagctacaacggc
ctgcaggattcaggagtgacgctgctgtgtgaaggactgaagagtccacactgtgacctg
gagactctcaggctgtcaggctgtctgatcacagaggacggctgtgcttctctggtctca
gctctgagctccaacccctcccacctgagagagctggacctgagctacaaccatccagga
gactctggggtgaagatgctgtctgctggagtgaaggatcctcactggagactggagact
ctcagggtggagcctgctggagtccaatggttcagaccaggtctgaggaagtattcctgt
gaactcacaatcgacacaaacacagtaaacagaaacctccaactgtctgacaacaacaag
aaggtgacacgtgtgtgggaggaggatcagtcacaccctgatcatccagacagatttgac
ttctggcctcagctgctttgtagaactggtctgactggtcgctgttactgggaggttgag
tggactggtcctttggttcctcagtgtctttgtgtcctcttcaggacggagagtctcctc
ctggtggagaaccttcctctctgctcaccacatagttcagtgtgtacagctgatggtggt
tcaggtgcaggtggagcaggtgaggggtacctgagctggtctggactctgggggtccaca
gctctctgggtctcagatggacgtgtgaaagagctcagcttgatgctgctgtgctccttg
aatcagtag
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