Pungitius pungitius (ninespine stickleback): 119197591
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Entry
119197591 CDS
T07626
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119197591
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119197591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
119197591
NCBI-ProteinID:
XP_062421550
LinkDB
All DBs
Position
11:complement(20049703..20059849)
Genome browser
AA seq
1146 aa
AA seq
DB search
MNQAEDAEDSVPPSEAPLCGGHDRQTKAQRIQHRPGPGLVAGPDSEPGLRCGPEPSCVSM
KSNQSMNHPIKFKDVRPSADASSHQQSGKSPEPSCVSMKSDWCTDVLNYFNNRRQPYDPQ
EDKESSEVPNCQFAQQHQTHLDSIFMLLEEDILTFVKNELKKIQKVVISGYPECLEMEDE
DVLDEEQRTSREAFVKISVHFLRKMKQEELADRLQSSLPSADCQRELKSNLKKKFQSVFE
GIAKAGNPTLLNEIYTVKLYTELYITEGGAAEVNQEHEVRQIERASRRPARPETTIRQED
LFKASAGGEEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKHNQDIQLTFPFTFRELNVLR
EKKYSLVGLVHHFFSEIRAAGICRFEEFQVVFIFDGLDECRLPLDFHNNEILTDGTELAS
VDVLLTNLIRGKLLPSARLWITTRPAAANQIPPQCVDMVTEVRGFTDPQKEEYFRKRFKD
KKQSSRIISHIRTSRSLHIMCHIPVFCWITATVVEDMLKTTELPKTLTEMYIHFLVVQSK
VKKVKYDGGAETDPHWSPESRKMIESLGKLAFDELQKGNLIFYESDLTECGINITAASVY
SGVFTQIFREERGLYQDKVFCFIHLSVQEFLAALHVHLTFFSSGVNLLSEEQTTSLLSKV
FGDKPEPMRLYQRAVDQALQSPNGHLDLLLRFLLGLCQETNQTLLQGLLTQTGSCSPTNE
ELVHYIKEKISEDVSPEKSINLFHCLNELNDVSLVEEIQQSLRSGRLSSDELSPAQWSAL
VFILLSSQEDLEVFDLKKYRASEEALLRLLPVVKASNKAQLSDCNLSERSCEALSSVLSS
QSSSLRELDLSYNGLQDSGVKLLCEGLKSPRCDLETLRLSGCLITEEGFASLASALSSNP
SHLRELDLSYNHPGDSGVKVLSAGLEDPHWTPETLRVEPAGVQWFRPGLRKYSCELTIDT
NTVNRKLKLSDNNKKVTCVDEYQSYPDHPDRFDHWPQLLCRTGLTGRCYWEVEWSGNVYL
SVSYRGIKRKGSSRHCWFGHNDQSWSLRCSEEGYSVRHNKTRVSITSSSSSSSSSSSGRV
AVYVDCPAGFLSFYRVSSDTLIHIYTFSTTFTELLYPGFFLWPDTSVSLCSLQEGESPPG
GEPSSL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggctgaggacgcagaggacagtgtccctccctctgaagcccctctgtgtggg
ggacatgacagacagaccaaagctcagaggatccaacatagacctggacctggacttgta
gctggacctgattctgaacctggtctgcgatgtggacctgaacccagctgtgtgtccatg
aagagtaaccagtctatgaatcatcctataaaattcaaagatgtccgtccctcggctgat
gcaagttcacatcagcagagcggaaagtctcctgaacccagctgtgtgtccatgaagagt
gattggtgtacagatgttctaaattacttcaataatcgacgccaaccttatgaccctcaa
gaagacaaggagagctcagaggttcccaattgtcagtttgcccagcagcatcaaacacac
ctggactccatcttcatgctgctggaggaggacatccttacttttgtgaagaacgagcta
aagaagatccagaaggttgtaatttcaggttacccagaatgcttggagatggaggatgaa
gacgtgctggatgaagagcagaggacgagcagagaggcatttgtgaagatctcagtgcac
ttcctgaggaaaatgaagcaggaggagctggccgaccgtctgcagagcagtcttccttct
gcagattgtcaacgtgaactcaaatccaacttgaagaagaagttccagtctgtgtttgag
ggcatcgctaaagcaggaaacccaacccttctgaatgagatctacactgttaaattgtac
acagagctctacatcacagagggaggggctgcagaggtcaatcaagaacatgaggtcaga
cagattgaaagagcatccaggagaccagccagaccagaaaccaccatcagacaagaagac
ctcttcaaagcctcagctggaggagaagaaccaataagaacagtgatgactaagggagtg
gctggcattgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaa
cacaaccaggacatacagctcacatttccatttaccttcagagagctgaatgtgctgaga
gagaagaagtacagcttggtgggacttgtacatcacttcttcagtgaaatcagagcagca
ggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctggatgagtgt
cgacttcctctggacttccacaacaatgagatcctgactgatggcacagagttggcctca
gtggatgtgctcctcacaaacctcatcagggggaagctgcttccctctgctcgcctctgg
ataaccacacgacctgcagcagccaatcagatccctcctcagtgtgttgacatggtgacg
gaggtcagagggttcactgatccccagaaggaggagtacttcaggaagaggttcaaagat
aagaagcagtccagcaggatcatctctcacatcaggacctcacgaagcctccacatcatg
tgccacatcccagtcttctgctggatcactgctacagttgtggaggacatgttgaagacc
acagagctgcccaagaccctaactgagatgtacatccacttcctggtggtccagtccaaa
gtgaagaaggtcaagtacgatggaggagctgagacggatccacactggagtccagagagc
aggaagatgatcgagtctctgggaaaactggcctttgatgagctgcagaaaggcaacctg
atcttctatgaatctgacctgacagagtgtggcatcaatatcacagcagcctcagtgtac
tcaggagtgttcactcagatcttcagagaggaaagaggactgtaccaggacaaggtgttc
tgcttcatccatctgagtgttcaggagtttctggctgctcttcatgtccacctgaccttt
ttcagctctggtgtcaatctgctgtcagaagaacaaacaacctccctgttgtctaaagtc
tttggtgacaaacctgaaccaatgcgtctctaccagagagctgtggaccaggccttacag
agtcctaatggacacctggacttgctcctccgcttccttctgggtctttgccaggagacc
aatcagactctcctacaaggtcttctgacacagacaggaagttgctcaccgaccaatgag
gagttagtccactacatcaaggagaagatcagtgaggatgtgtctccagagaaaagcatc
aatctgttccactgtctgaatgaactgaatgatgtttctctagtggaggagatccaacag
tcccttagatcaggacgtctctcctcagatgagctgtctcctgctcagtggtcagctctg
gtcttcatcttactgtcatcacaggaagatctggaggtgtttgacctgaagaaatatcgt
gcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctcaa
ctgagtgactgcaacctctcagagagaagctgtgaagctctgtcctcagtcctcagctcc
cagtcctctagtctgagagaactggatctgagctacaacggcctgcaggattcaggagtg
aagctgctttgtgaaggactgaagagtccacgctgtgacctggagactctcaggctctca
ggctgtctgatcacagaggaaggctttgcttctctggcctcagctctgagctccaacccc
tcccacctgagagagctggacctgagctacaaccatccaggagactcaggagtgaaagtg
ctgtctgctggactagaggatccacactggacaccggagactctcagggtggagcctgct
ggagtccaatggttcagaccaggtctgaggaagtattcctgtgaactcacaatcgacaca
aacacagtaaacagaaaactcaaactgtctgacaacaacaagaaggtgacatgtgtggat
gagtatcagtcataccctgatcatccagacagatttgaccactggcctcagctgctgtgt
agaactggtctgactggtcgctgttactgggaggtcgagtggagcggaaatgtttattta
tcagtgagttacagaggaatcaagaggaaaggaagcagtagacattgttggtttggacac
aatgatcagtcctggagtctgagatgctctgaagaaggttattctgtccgtcacaataag
acaagagtgtctatcacctcctcctcctcctcctcctcctcctcctcctctggtagagta
gcagtgtatgtggactgtcctgctggctttctgtccttctacagagtctcctctgacaca
ctgatccacatctacaccttcagcaccacattcactgaacttctttatcctgggttcttt
ctctggcctgatacctcagtgtctctgtgttctctgcaggagggagagtctcctcctggt
ggagaaccttcctctctgtag
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integrated database retrieval system
