Pungitius pungitius (ninespine stickleback): 119197620
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Entry
119197620 CDS
T07626
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119197620 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119197620 (dmxl2)
Membrane trafficking [BR:
ppug04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119197620 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
119197620 (dmxl2)
RAVE complex
119197620 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF12
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_ACSF4
NBCH_WD40
VPS11_N
Motif
Other DBs
NCBI-GeneID:
119197620
NCBI-ProteinID:
XP_037309994
LinkDB
All DBs
Position
4:complement(20423137..20454080)
Genome browser
AA seq
3063 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDVVILATDFDCVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPLSTNPNKRHKQLNYQWQKTGQFFLEAITYNLAWDP
QGNRILAATERLQLWAPPLAYALIEEEDAQLNEDKPYPVLNDWNCVWQCKTAASVHIAKW
SPDGEYFATVGKDDCLLKVWYPTTGWRSAVVVHDPSDKRPPPVHFSFVYLAHPRSVTGMS
WRRTSKYMPKGSVCNVMLTSCEDGVCRMWSETLLPEDSLLGGQISENIHSTSSSLPGLAV
NKDKIQHALESIHHLKHLRRGRRRSSALVAHSELLPSQLGTQDAHTHRHIAHHANALCHF
HISASINPNTDIPSALADSAVFNPDDGTGGGGFVVHWLNNKDLSFTTSMDLFMLQLRKFS
EQHVDQTTEDPLDPEGSTIKFDFDLDEMSDKASSEQGEEGEPGEQGSTKASSPGSNSSMP
LPSMLLERKMETLITEWNKSPDMLFTIHPNDGSFLVWHVKYLDEFNQGIFRQVQVSFSSR
IPVAFPTGDANSLSKNILMYACTLTEGASAEEQRRMVQRVSHSASASASLGSTALAASLN
PRPGISPAVMMVSKHVDGSLNQWAVTFAERSAFSNVMNVSHKFRYCGHRFHLNDQACHTV
LPLLLTSSHHNALLTPPSAPSSLEGEQPPTFSLAKGPFSSRKQLRNAATRTFHDPNAIYS
ELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSASACFV
ASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQC
GANTQLLHVFQEDFILGYKPQTEPEAFPPAFPCGEDYQPAPFSEKFFLVVIEKDLNRNSV
LQMWHLHLKSVQACVDEGSPDSSFQSELMVPNQAVNADSSPETSPIRPLPRSASTANLQS
ASKLILSSKLVYSKRLDLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRF
WRCAVEGDDGCSEDDRDNRCYRWEPWALMNEEEDNNSAVCVSGRPVAVSCSYIGRLAIAF
KKPRQGQLQGSGEDFSMHVSIYECESTGGSEWVLEQTLHLDDFTRPSSTLDPRVSVDSNL
FVYSRSDLYMSRDHSSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGVINEPIS
SKDGVAVITLPLGGSIKQGIRSRWILLRAVDVLSSVDGTPSLPVSLSWVRDGILVVGMDC
EMHVYAQWHQDKKPGEGEEGNLSTADIAGGQSAGSSSAFEGRARSKSVFEGGVAVDEALR
APAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVVR
DVEAGEGGARRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYSLMLADLDTS
YKGAEEGAKGAKVDSDGSQKSAEDQYSDLFQVQSVTTDDYLTFATDKPEKKSRVINLSQY
GPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVTSSTDQKCTGGEA
LDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPAMQ
RGDLQWSELKAVGVGWWVRNINTLRKMVEKLGKAAFQKHNDPLDAALFYLAMKKKAVLWG
LFRSQHDEKMTQFFKNNFSEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVL
LEKMEDLQLAMIVARLYEADFENSSTCQGLLHEKVLGCNRDGSGYHCSRLHPDPFLRSIA
YWIMKDYTRALDTLLERIPKEGDENPDVTVKACNPVVFSFYNYLRTHPLIIRRHFANPEA
PATAVGFTAEKNSAVEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKKSSSLPV
RKASSKGNGNSHKPLENGTLGGVEWGAPAAPVQAWGGNDSVGGLDWSQPLVKVEEDELKL
DWDQDKEDEDDDDEEEDGLTMKKPEAETKVEGGSESGCSKLKKEESQSESEVDVIAEQLK
FRACLKILMTELRTLATGFEVDGGKLRFQLYSWLEKEIAAMHTICNYKVEGKDEDSEVER
WRARTASVDVSDDALERTEAGAYERHQMERRRLQAKQQHSERRKAWLRKNQALLRVFLSY
CSLHGAKGGGVTSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSACIATTKTVIAN
PVLHLSNHIHDILHTITLLETTPHPDVMDDRVNSLHTLAASLSACVYQALCDSHSYSSQT
EANQFTGMVYQGLLLSARKRLRTESIEEHVTPNSAPAQWPGVSSLISLLTSAREADQPRL
NVLLCEGVMAVYLALLIHGLGTHSSNELFRLAAHPLNNRMWAAVFGGGAKLIIKPKRTEA
PPAAPPQAPAEDVDRYRRRFNMRMLVPGRPVKETPATPPPVPPERPAYREKFIPPELSMW
DYFVAKPFLPLSDSNALCDSDESGAEDDEDDDDAFLSDTQMTEHSDPNSYSWALIRLAMV
KLAHHNVKNFLPITGLDFAELPVVSPLSNAVLKTLEHWEQLLLEKMNKFDGPPPNYINTY
PTDLSAGGGPAILRHKAMLEPDNTPFKTKNTQSFPARRLWHFLVKQEVLQETLIRYIFTK
KRKQCESVENHMDRINPNCIAGASGPYKVEADLGYPGGKARIIHKESDIIMAFAINKSNS
NEIVLASTHDVQEVDVSTLVAVQPFTWIGDEFDKESRSSDDVDHRSSHTNIAQASSAPFA
PPQMQVSASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWN
RPQQLICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHTK
TCGDFDFITSSSLIATAGQSNDNRNVCLWDTLVSPSNTMVHAFPCHENGATVLQYAAKQQ
LLITGGRKGFVCVFDIRQRQLLHTFQAHDSAIKALALDAFEDFFVTGSAEGNVKVWKLAG
HGLMHSFSTEHAKQSIFRNIGNGVMKVETRPGNRIFTCGADGTLKMRVLPDRYNIPSSLV
DVL
NT seq
9192 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcaggtgctgacgggagctgtaaaccctggagattgctgctattccgtg
gggagcgtaaatgacattcctttcacggcctatggctcgggttgtgatgtcgtgatcctg
gccactgacttcgactgtgtgcagatcatccccggagctcagaatggaaacatacaggtg
ggctgtgtggagtgctcccaccagcttggcaggattgctgcatcttacggaaacacagtc
tgcatctttgagccgctttccaccaacccgaacaaacgccacaagcagcttaactatcag
tggcaaaagacaggacagttcttcctggaagccatcacctacaacctggcctgggaccca
caagggaaccgcatcctcgcggcgactgagcggctccagctgtgggctcctccgctggcg
tacgccctgatagaggaggaggacgcacagttgaacgaggacaagccctaccctgtcctc
aacgactggaactgtgtctggcagtgcaagactgcagcatctgttcacatcgccaagtgg
tctcctgatggcgagtattttgcaaccgttggaaaggatgactgtttgcttaaggtgtgg
tatcccaccacgggctggcgttctgcagtggtggtccacgacccgtccgacaaaaggcct
cctcctgttcacttctcctttgtttacctggctcatcctcgctctgttacgggtatgtcc
tggaggaggaccagcaagtacatgcccaagggttcggtgtgcaatgtgatgctgacttcc
tgcgaggatggtgtatgtaggatgtggtcagagaccctgctcccggaagacagcctgctg
ggtggacagatctccgagaacatacactccaccagctccagcctgccaggactggccgta
aataaggacaagatccagcatgctttggagtcgatccatcacctgaagcatctgcggcga
ggccggcggcgatcctctgctttggtggctcacagtgagctgctgccctcacagctcggc
acgcaggacgcacacactcaccgccacatcgcccatcacgccaatgccctgtgtcacttc
catatctcagcgagtattaaccccaacacagacatcccatcagcgctggctgactctgca
gttttcaacccagacgatggcaccggcggcggaggcttcgttgttcactggctcaacaat
aaggacctcagcttcacaacctccatggacctctttatgctgcagctccgtaaattctct
gaacagcacgtggaccagacgaccgaggaccccctggaccccgagggatccaccatcaag
tttgactttgacctggacgagatgtccgacaaagcgtcctctgagcaaggggaggagggg
gagccgggggagcaggggagcactaaggcgtcctccccgggatccaactccagcatgcct
ttgccttccatgctgctggagaggaagatggagactcttatcacagagtggaacaaaagc
ccagacatgttgttcaccattcatcctaacgatggctccttcctggtctggcatgtcaag
tatctggacgaattcaaccagggaatcttcagacaggttcaggtgtccttctcctcccgt
attccagtggcatttcccacaggtgatgccaactccctgagtaaaaacatcctgatgtac
gcctgcactttgactgagggtgccagcgccgaggagcagcggaggatggtccaacgcgtc
tcccactccgcttcagcctcggccagccttggttcaactgcactggccgcctcgctgaac
cctcggcccggcatcagtcctgctgtcatgatggtctccaaacacgtggatggatctctc
aaccagtgggcagtgacatttgcagagcgctctgccttctccaacgtaatgaacgtgtca
cacaagttccggtactgcggccaccgcttccatctgaacgaccaagcctgccacacagtg
ctgccgctgctgctcacctcctctcaccacaacgctctactcacccctccatcggccccc
agcagcctggaaggagagcagcctcctaccttttcactagcaaagggacctttcagtagc
aggaagcagcttcgtaatgcagcgacgaggactttccatgaccccaacgccatctacagt
gaacttatcctctggagggtggaccacattggacccctttcctgcactggaggggtctcc
gagctggcccgcattaactctctgcacacctcagccttcagcaatgttgcttggctccct
acactagtacccagctctgtacttggaacttactgtaacagcgccagtgcctgcttcgtg
gcatcagatgggaaaaacctccgtctctatcaagctgtggtggatgccagaaaactactg
gatgagctgtcagaccctgaaacgtctaaactggtgggcgaagtgttcaacattgtcagc
cagcagtccactgccagacccggttgtatcatagagttggacgtcattacaaatcagtgt
ggcgccaacacccagctgctgcacgtcttccaagaggacttcattctaggttataagcct
cagacggaaccagaagcattcccaccggcctttccatgtggcgaagattaccaaccggcc
ccgttctctgagaagttcttcctggtggtcatcgaaaaggatctcaacaggaactctgtc
ctgcagatgtggcacctgcacctgaagtctgtgcaggcctgtgttgacgaggggagcccg
gacagcagcttccaaagcgagctgatggttcccaatcaagctgtgaacgctgactcatct
ccagagacctcgcccatcaggcctctgcctcggtcggcctcgacggccaatttgcaatca
gccagcaaactcatcctcagctccaagctggtgtacagcaagcggctggacctgccccac
ggggtggaggtcaccagggccaccccctctgcaggtcatctgagctcctcttctatctac
cccgtgtgcctggctccgtacctgattgtcaccacctgctcggactctcgagtgcggttc
tggcgctgcgccgtggagggcgacgacgggtgtagcgaggatgaccgggacaaccgctgc
taccgctgggagccctgggccctgatgaacgaggaggaggacaacaacagcgccgtgtgt
gtgtccgggcggcccgtagcggtgtcctgctcctacatcggcaggctcgccattgccttt
aaaaagcctcgccaagggcagctgcagggttctggagaggacttctccatgcacgtgtcc
atctatgagtgtgaatcgaccggcggctcggagtgggttttagagcaaactctccacctg
gacgacttcaccagaccctcgtcgaccctggatcccagagtcagcgtggactccaacctc
tttgtgtacagcaggtcggacctgtacatgagcagagaccacagctcccccaacattaag
cactacgttcacttggactggctgtcaaaggaggacggctcccacatcctcaccgtggga
gtggggtccaacattctcatgtacggccgcatctccggcgtgatcaacgagccgataagc
agcaaggacggcgtggcggtcatcacccttcccctagggggcagcattaaacagggcatc
cgatcgcgctggatcctgctgcgggccgtggacgtcctgtcctctgtggacggcaccccg
tctctgccggtctccctgtcctgggtgagggatggcatcctggtggtgggcatggactgt
gaaatgcacgtgtatgcccagtggcatcaggacaagaagcccggggagggagaggagggc
aacctgtcgaccgcagacattgccgggggtcaaagcgcaggttcctcctcggcttttgaa
ggcagagccaggtccaagagtgtgtttgaaggaggcgtcgcagtggacgaggcccttcgt
gccccggcgggacttcaggaggggggactgtttgaagcggctcactccctgtctccgact
ctaccccagtaccatcccactcagctgctggaactcatggacctgggcaaggttcgccgt
gccaaggccatacttgctcacctggtgaagtgcattgccggggaggtcgctgtggttaga
gatgtggaggcaggtgagggcggagctcggagacatctgtcccgtactatcagcgtgacc
ggcagcacagccaaggacaccattgtggccgggcgcgacggggggagggactacacggag
atcaactccatccctccgctgcccctctattccctcatgttggctgacctcgacacctcg
tacaagggagcggaagagggcgctaagggagctaaggtggatagtgatggatcccagaag
tctgcagaggaccagtattccgacctcttccaggtccaatctgtcactacagatgattat
ctgacctttgccaccgacaaaccagagaagaagtctcgagttatcaacctctctcaatat
ggaccgacttactttgggcctgagcatgctcaggttttatccagtcacctcatgcactca
agcctcccaggactgaccagactagagcagatgttcttggtggccttggccgatactgtt
gcaaccaccagtgctgaggtcaccagctccactgaccagaagtgcacaggtggcgaggcc
ctcgacgagtgcggcctgaggtacctgttggccatgcgtcttcacacctgcctgctcacc
tctctgccccccctctaccgcatgcagctgctccaccagggcctatcaacatgccacttt
gcatgggccttccactctgaggccgaagaggagctgctcaacatgatcccggccatgcag
agaggcgacctacagtggtctgagctcaaagccgtcggagtgggttggtgggttcgtaac
atcaacactctgcggaaaatggtggaaaagttaggtaaagctgcgttccagaaacacaac
gaccctttagatgctgcgcttttctacctggccatgaagaagaaagctgtgctgtggggg
ctcttcaggtctcagcatgatgagaagatgactcagttcttcaagaacaactttagcgaa
gaccgctggcgaaaggcagctctgaagaatgctttctccctgctggggaagcagcgcttt
gagcagtcagctgcctttttcctcctggctggatcactcaaagacgccattgaggttttg
ttggagaagatggaggacctccagttggccatgatagtggcaaggctgtatgaggccgac
tttgagaactcctccacctgccagggcctccttcacgagaaggtcctgggctgtaacagg
gacgggagcggttaccactgttccaggctgcacccggacccgttcctccgcagcatagcc
tactggatcatgaaggattacacgcgagctctggacacactgttggaacgaatccccaag
gagggtgatgaaaaccctgatgtgacggtgaaggcttgcaaccccgtggtgtttagtttc
tataactacctgaggacacaccctttgatcatccgccggcacttcgcaaacccagaggcc
ccagcgacagctgtgggcttcaccgccgagaagaacagcgccgttgagatcaacctcatc
gagcgcaaactgttcttcaccactgccaatgcacacttcaaggtgggctgcccagttctg
gctctggaagtgctctccaagatccccaaagttaccaagaaatctagttccttacctgtc
agaaaagcatcatccaaaggaaacggaaactcacacaaacccctggaaaatggcaccctg
ggaggcgtggaatggggcgcccccgcagcccccgtgcaagcgtggggaggaaacgatagt
gtgggtgggctggactggagccagcctctggtgaaggtggaggaggacgagctgaagctg
gactgggaccaggacaaggaagatgaagatgatgatgatgaggaggaggatggtttgacc
atgaagaaaccagaggctgagaccaaagtggaaggaggctcagagagtggctgctccaaa
ctaaagaaagaggagtcacagagtgagtcggaggtggacgtgattgcggagcagctgaag
ttccgcgcctgtctgaagatcctgatgaccgagctgcgcacgctcgccacaggcttcgag
gtggacggagggaagctccgctttcagctctacagttggctggagaaggagatagctgcc
atgcataccatctgcaactacaaggtggaggggaaggatgaagattcagaggtggagcgc
tggagagcgcgcacggcatcggtggacgtatcggacgacgccctggagcgcacggaggcc
ggggcgtacgagcgtcaccagatggagcggcggcgtctccaggccaagcagcagcactct
gagaggcgcaaggcgtggctgaggaagaaccaggccctgctgagggtgtttctgtcctac
tgcagccttcacggagccaaggggggcggagtcacgtccgtccgcatggagcttctgttt
cttctgcaggagagccagcaggagaccacggttaagcagctgcagtctcctctgcctctg
cctactacgctgccgctgctgtcagcgtgcatcgcaaccaccaagacggtcatcgccaac
ccggttctccacctcagcaaccacattcacgacatcctccacaccatcaccctgctggag
accacgccgcatcccgacgtgatggatgatcgggtcaattctcttcatacactggcagca
tctctttctgcttgcgtctatcaagcactgtgtgacagccacagctacagcagccagacg
gaggccaaccagtttacagggatggtgtaccagggcctgctgctcagcgcgaggaagcga
cttcgcacggagagcatcgaagaacatgtgactcccaactctgctcctgcacagtggcca
ggtgtgtcgtccctgatctctctgttgacgtctgccagggaggcggaccagccgaggctc
aacgtgctgctgtgcgaaggggtcatggctgtttatctcgcgctgctcattcacggcctg
ggcacccacagcagcaatgaactcttccgcctggcagcgcacccgctcaacaaccgcatg
tgggccgccgtctttgggggaggggccaaactcattatcaagccaaagagaactgaggcc
ccaccagcggctccccctcaggccccagcggaggatgtggaccgataccgacgcaggttc
aacatgaggatgctcgttcctggacgccctgtgaaggagacccccgccacccccccgccg
gtgcccccagagaggcccgcgtacagggagaagttcattcccccggagctgagcatgtgg
gactactttgtggccaaacccttcctgccgctgtcggacagcaatgccctgtgcgactcg
gacgaaagcggcgcggaggacgacgaagatgacgacgacgcattcctctctgacacgcag
atgacggagcactccgaccccaactcctacagctgggctctgatccgcctggcgatggtg
aaactggctcatcacaatgtcaagaacttcctccccatcaccggcctcgactttgcagag
ctgccggtcgtttcccctctgagcaacgccgtgctgaagactctggagcactgggagcag
cttctgctggagaaaatgaacaagttcgacggcccgccgcccaactacatcaacacttac
cccactgacctcagcgcgggagggggcccggccatactccgacacaaggccatgctggag
ccagacaacacacccttcaagacaaagaacactcagtcttttccagcccgacgtctttgg
cacttcctggtcaaacaggaagttcttcaggagactttgatccgttacatctttaccaag
aaaaggaagcagtgtgagtctgtagagaaccacatggaccgtataaacccaaactgcata
gcaggagctagcggtccctataaggtggaagcggatctgggctaccccggaggaaaggct
agaatcatccataaagagtctgatataatcatggcattcgccattaacaagtccaactcc
aacgagatagtgttagcctccactcacgatgtccaggaggtggacgtgtcaacactggtg
gctgtccagcccttcacttggataggggacgaatttgacaaggagtcccgcagctctgac
gacgtggaccatcgctcttctcacaccaacatcgcccaggccagctctgcccccttcgca
cccccacagatgcaggtctctgcgtccatgccgtggctcggcagcgggcagaccagcatg
ggggccagcgtgattatgaaaaggaatctcaacaatgtaaagagaatgacatcccatcct
atatatcagtattacatgaccggggctcaggacggcagtgtgagaatgttcgaatggaac
agacctcagcagctcatttgcttcagacaagcaggcaatgccagagtcacccgactctat
ttcaactcccagggcaataagtgtggagtcgctgacggagagggcttcctcagtctgtgg
caggtcaaccagacatcctccaaccccaaaccctacctgagttggcagtgccacactaag
acctgcggtgactttgacttcatcacctcttccagcctcatagccacagcgggacagtcc
aacgataacaggaatgtttgcctgtgggacactctggtttcgccgagcaataccatggtg
cacgcgttcccctgccacgagaacggggccaccgtgctgcagtacgctgcaaagcagcag
ctgctcatcaccggaggcaggaagggctttgtgtgcgtgttcgacatccgccagaggcag
ctgctgcacactttccaggcccacgactccgccatcaaggccctcgcgctggacgccttc
gaggacttctttgtcactggctctgcggagggcaacgtgaaggtgtggaagttggccggc
cacgggctcatgcactccttcagcaccgagcacgccaagcagtccatcttccgcaacatc
ggcaacggcgtcatgaaggtggaaacgcggcccggcaaccgcatcttcacctgcggggcg
gacggcacgctgaagatgagggtcctgcccgaccgctacaacatccccagcagcttggtg
gacgtcctgtag
DBGET
integrated database retrieval system
