KEGG   Pungitius pungitius (ninespine stickleback): 119197646
Entry
119197646         CDS       T07626                                 
Symbol
snrpa1
Name
(RefSeq) U2 small nuclear ribonucleoprotein A'
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119197646 (snrpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppug03041]
    119197646 (snrpa1)
Spliceosome [BR:ppug03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    119197646 (snrpa1)
 Complex B
    119197646 (snrpa1)
 Complex C
   U2 SnRNP specific factors
    119197646 (snrpa1)
SSDB
Motif
Pfam: LRR_9 DHU1_N LRR_14 LRR_4 LRR_8
Other DBs
NCBI-GeneID: 119197646
NCBI-ProteinID: XP_037310039
LinkDB
Position
4:6278906..6284196
AA seq 290 aa
MVKLSAELIEQAAQYTNPIRDRELDLRAYKIPVLENLGATLDQFDTIDFSDNEIRKLDGF
PLLRRLKTLLMNNNRICRIGENLEHSLSALTELVLTNNNIQELGDLDPLATVKTLTLLSL
LRNPVTNKKHYRLYVINKMPQIRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAKRTKT
FTPGAAAQLEKKRTGPSQADVEAIKIAIANASSLAEVERLKGMLQAGQIPGRDQRQGPAL
EMEEGVEEEEEDDEEENGNTAPMAGASGEMNEGDQEEDEDMEPEPHINGS
NT seq 873 nt   +upstreamnt  +downstreamnt
atggtgaaattatctgcggaactgattgagcaagctgctcagtatactaacccgatcaga
gacagggagttggatctacgagcttataaaattccagtacttgaaaatcttggagctact
ctggaccagtttgacaccattgacttctctgataatgaaatacgaaaactggacggcttt
cctctccttcgaagactgaaaacattgctaatgaacaacaacaggatctgtcgcataggg
gagaatctggagcactccctatcggcgctgacggaacttgttctaacaaacaacaacatc
caggagttgggtgacttggaccctctcgcaacagtgaagacattgactctgctcagcttg
ttaaggaatccagtgacgaacaagaagcattacaggctgtatgtcatcaacaaaatgcca
cagatccgtgtgctcgacttccagaaggtaaagctcaaggaacgccaggaggcagagaaa
atgttcaagggcaaacggggggctcagcttgcaaaggatattgccaagcgaacaaaaacg
ttcactccgggggcggcagcacagcttgagaagaaaaggacgggcccgtcacaagcagat
gtcgaagcaatcaagattgccattgctaatgcgtcatcgttggcggaggtggagaggttg
aaagggatgctccaagctggtcagatcccaggacgagatcagagacaaggtccagctttg
gagatggaagagggggtagaggaggaggaggaggacgacgaagaggaaaatggtaacact
gcacctatggctggagcttctggagagatgaacgagggtgatcaggaagaagatgaagac
atggaaccagagccacatattaatggctcctga

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