Pungitius pungitius (ninespine stickleback): 119197735
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Entry
119197735 CDS
T07626
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119197735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119197735
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
119197735
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
PLAC
TSP1_spondin
ADAMTS_CR_3
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
119197735
NCBI-ProteinID:
XP_037310205
LinkDB
All DBs
Position
4:1088728..1114622
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AA seq
960 aa
AA seq
DB search
MQAACVWIARASVLWLLLSDLLDSQHSTQQMKVPERAEPPREFRAEQGGVQGSWGTWGPW
TTCSRTCGRGVQEQSRPCLPVYTPSQYPSRRGGVPPRQPGHVISALRPTVPLHRDPARSS
NSSSHGDLRETRPEGRRRVTQINPGRYGYGRAPYVAPSQGRGPGRPRPGRQRRSAPADAQ
RHAARGHVGHRSNHLEPANPVHPRSRPRAQLPKHNQVWAPLYQPGPANQAQVPQEPQSSR
QTSGPQQHHERPYDPLPSSFCTGEHAHYRICNSNACPPSSRHIRAVQCSSYDKRPFMGRL
YQWEPFNEVPLDQHCGLNCRAIGFRFYVLQSERVMDGTPCGQNDTSLCVLGTCLSPGCDD
YLGSGKVMDECGVCGGYNTTCRLISGVFKHSLTKVGYHKIVEIPQGATKINVTEMVKSRN
YLALRSRSGRSIINGNWAIDRPGKYEGGGTMFTYRRPNEIRSTAGESFLGEGPTNEILDV
YMIFQQPNPGVHYEYILPSEQPVDPQQPNHGPQGNAVNGQAGSDHHSGTHQEHLDPAGGG
QEPPRLPDNQVSAAQPPRREREYSWRLGGSTECSASCGKGFRHSIFHCVSRPDQGQVSDA
LCDRSSRPTPQEEACNLEPCPAFWDIGEWSECSKTCGLGTQHRQVLCRQIYANRTLNVHA
SHCRHLERPEISSTCQMKICSEWQTRSEWTACSVPCGLGQRSREVRCVSNLGDFVPDDEC
NMNLRPVDVENCDMGTCAKSWFYTEWSSRCSADCGMGARTRGVLCLTHQVSGLPLEGCGG
ERPPDAQVCNNGLCENRMEWFTGPWSQCSAECGAGSQQRSLVCLMQSDEGFAVMPPYECS
SLDRPLGQQSCSLKACGAKWFHTDWSACSKTCERGFRVREVRCLSQDALPSEGCDERLRP
AGREDCNPEPCLPSVDENCRDKYFNCNVVVQARLCVYDYYQTACCSSCSRGAHRHHHGRR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcagcctgcgtctggattgccagagcttctgtcctctggctgttactgtccgac
ctcctggactcccaacactcaacacaacagatgaaggttcctgagagggcagagccccca
cgggagtttagggcagagcagggaggtgttcagggctcctggggtacctgggggccctgg
acgacctgctctcggacctgtggaagaggggtgcaggagcagagcaggccctgtctgcct
gtttacacgccgtcccagtacccctccaggagaggcggtgttcccccccggcaaccaggc
cacgtcatttcagccctgcggccaacagttcctctgcaccgcgacccggcccggtcctcc
aacagcagcagtcatggcgatctgagggagactcggcccgaaggacgcaggagagtcact
caaatcaacccggggaggtatggctacgggagagctccttatgttgctccatcacagggc
cggggccctggtaggcctcgccccggcagacagagacgctctgcgccggctgacgcccag
cgccacgccgccaggggccacgtcggccacaggtcaaaccacctggagcccgccaacccc
gtccatccccgcagcagaccaagggcacagctgcccaagcataaccaagtgtgggctccc
ctctaccagcctggtccggccaaccaggctcaggtcccccaggagccacagtcgagcagg
cagacgtctgggccccagcagcaccacgagagaccctacgacccgctgcctagttccttc
tgcacgggggagcatgctcactacaggatctgcaacagtaatgcctgtcctccatccagc
agacacatcagggctgttcagtgttcttcatacgacaagcgacctttcatgggccgattg
taccagtgggaacctttcaatgaggttcctttggatcagcactgtggactcaactgccgg
gccattgggttcaggttctacgtgctgcagtcagagagggtgatggacgggacgccatgt
gggcagaatgatacttctctatgcgtgctggggacgtgtttgagtccgggctgcgacgac
tatctggggtcgggaaaggtgatggacgagtgcggcgtgtgcgggggctacaacaccacc
tgtaggctcatctctggagtgttcaagcacagcttgaccaaggttggctaccacaagatc
gtggagatcccgcagggagccaccaagatcaacgtcacggaaatggtgaagagcaggaac
tacctagctctccgaagccgatcgggtcgatccatcattaatggaaactgggccattgac
agaccagggaagtacgagggaggcgggaccatgttcacctaccgccggcccaatgaaatc
agaagcactgctggggagtccttcctcggtgaagggcctaccaatgagatcctggacgtt
tatatgatcttccagcagccgaaccctggtgttcactacgagtacattctcccgtctgag
cagccagtcgaccctcagcagccaaaccacggaccacaagggaacgctgtgaatggacag
gctggttccgaccatcacagcggcactcatcaagaacacttggatccggcaggtggcggg
caggaacctcctcgtctccctgacaaccaggtttccgcggcgcagccccccagacgggag
agggagtacagctggagactgggcggcagcacagagtgtagcgcctcctgtggtaaagga
ttccgacactccatcttccactgtgtctcccggccggaccagggacaggtgtcagatgct
ttgtgtgacagaagcagcaggccgactccccaggaagaggcctgcaacctggaaccctgc
ccagccttctgggatattggagagtggtcagaatgcagtaagacctgcggcctgggcacg
cagcaccgacaggtcctgtgtcggcagatttacgctaaccgcacgctcaacgtccacgcg
agccactgtcgacacctggagcgacccgaaatcagcagcacctgccagatgaagatctgc
agcgagtggcagacacgctccgagtggaccgcgtgttcagtgccgtgtgggctgggtcag
aggtcacgagaggtccgctgtgtcagcaacctgggcgactttgttcctgacgacgagtgc
aacatgaatttgcggcccgtcgatgtggagaactgtgacatgggaacctgtgccaagagc
tggttctacaccgagtggagcagcaggtgctcggctgactgtgggatgggggcccggacg
cgaggagtcctctgcctgacccaccaggtcagcggcctccctctggaggggtgcggcggc
gagcgcccccccgacgctcaggtctgcaacaacggcctctgtgagaatcgcatggagtgg
ttcacgggcccctggagccagtgctccgcagagtgcggcgcgggcagccagcagaggtca
ttggtgtgtctgatgcagtcggatgaaggattcgccgtcatgccgccgtacgagtgctcc
tccctggatcggcccctcggccagcagagctgcagcctgaaggcctgcggagcaaagtgg
ttccacaccgactggagcgcttgctccaagacatgcgagcggggcttccgtgtgcgggag
gtgcgctgcctgtcccaagacgcgctgcccagcgagggctgcgacgagcggctgaggccg
gcggggagggaggactgcaacccggagccctgcctacccagcgttgacgagaactgccga
gacaaatacttcaactgcaacgtggtggtccaggcccgcctgtgcgtgtacgactactac
cagacggcgtgctgctcgtcgtgctctcggggggctcacagacatcatcatgggcgcaga
tag
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