Pungitius pungitius (ninespine stickleback): 119197800
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Entry
119197800 CDS
T07626
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119197800 (irx4a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119197800 (irx4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
119197800
NCBI-ProteinID:
XP_037310309
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Position
11:complement(746376..752484)
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AA seq
479 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSIADSGVAAAGQTPVYCPVYESRLLATA
RHELSSAAALGVYGSPYTGGQGYGNYVTYGTDASAFYSLGAFDTKDPTASAHAGITQATA
YYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDEDEDGSQEEQIKSENNEDET
RSRPDKDLQLSDLDEFDTLESENSECELKHRYHLNTHMTTTGDCPAEHLVKDSSLKISIP
VSLGGERDLSKSCLKTNPEDFQADSRQQAKACYNQQQQQQQQHPGHQLLDGKPRIWSLAQ
TATSLNQTEYPSCMLRCQPPPSSLTPSPAATSPVTGLDNRQDSPVTTLRNWVDGVFHDPL
FRHSTLSQALTNTTVSWTTNPKGAILEAERSAAALQQHQDSAKDSAMSFPKTINKLFCS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccctattcgtctgctccacaattcctgatgacaacc
aactctctgaccacttgctgcgagtccaccggcagatccatagccgactccggagtggcg
gcagccggccagacaccggtctactgtcccgtgtacgagagccggctgcttgccacggcg
aggcatgaactcagctcggccgccgcgctgggcgtttacgggagtccgtacaccggaggt
caaggctacgggaactacgttacgtacggcaccgacgcctcggcattctactcgctgggg
gcatttgacactaaagatcccacagcttctgcgcatgcgggaataacccaggcaacagcc
tactatccttatgatcctaccttgggacagtaccagtatgacagatatggttccatggat
gggggaacaaggcggaagaacgccactcgggagacaaccagcacacttaaggcctggctg
caggaacacaggaagaacccgtacccgactaagggtgaaaagatcatgctggccatcatc
accaagatgaccctgacgcaggtctccacctggtttgcaaacgccaggaggaggcttaag
aaggagaacaagatgacatggccgcccagaaataagggctcagaggagaagagatatgac
gaggatgaagatgggtctcaagaggagcagataaagagcgagaacaacgaggatgagacc
agaagtcggcctgataaggacctccagttgagcgatttggatgaattcgacacgctggag
tcggagaactcggagtgtgagctgaagcaccgataccacctgaacacacacatgacgacg
acgggagactgccccgccgaacacctcgtcaaggactcgtctctgaaaatctccattccg
gtttctctgggaggggagcgggacttgagcaaaagttgtctcaaaaccaacccggaggat
ttccaggcggacagcagacagcaggcgaaagcatgttacaaccaacagcagcagcagcag
cagcagcatccagggcaccagctattagacggcaagcctcggatctggtctttggcacaa
actgcaacgtccctgaaccagaccgagtacccgtcctgtatgctgaggtgccagccgccg
ccctcctccctcaccccgtcccccgccgctacctcacccgtgaccggcctggacaacagg
caggactcgccggtcacgaccctgcgaaactgggtggacggagttttccacgacccgttg
ttcaggcacagcactttgagccaggctctgaccaacaccaccgtctcttggaccacaaac
cccaaaggcgccattctggaggctgaaaggagcgcggcggccttgcagcagcaccaagac
tccgccaaagacagtgccatgagtttcccaaaaactatcaacaaacttttctgctcttaa
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