Pungitius pungitius (ninespine stickleback): 119197819
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Entry
119197819 CDS
T07626
Symbol
bcam
Name
(RefSeq) LOW QUALITY PROTEIN: basal cell adhesion molecule
KO
K06578
Lutheran blood group glycoprotein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ppug04090
]
119197819 (bcam)
CD molecules [BR:
ppug04090
]
Proteins
119197819 (bcam)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
C2-set_2
V-set
ig
Ig_5
Ig_4
Ig_6
Protocadherin
S1FA
Orf78
Amnionless
C1-set
DUF3377
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
119197819
NCBI-ProteinID:
XP_062421662
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All DBs
Position
11:complement(20335775..20365968)
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AA seq
578 aa
AA seq
DB search
MDGTFLACTLLLCAFQVCSGDVKVKADPKVEVLKGETAKLSCTYTVSQESSNTIVEWYIE
ENGARKRVAFLSGGKGKSDEGTPLTGRVSLGDDFSLTISSVQPSDELVFICQVTAGPAGV
GDATTMLKVFFAPEKPQLTKPSSQAISAGQTTSSEIGTCETMNGHPPPRIIWFKDDQPLP
EVKDRKEKTYMVSSVVKEASGLYTVRNTLYMQPKKADKDSVFQCIVEYSMPGEQIRQKKS
DTITINLNYPSEKASFSLVYKGPVKEGDDVTMKCETDGNPQPEIDFTKDGKAISGQGGLL
VLKSVKRTEAGVYECTATDFDNLDADLSGTINLTVNYIDPVSVTPAEPQVVKLGDKVEWH
CKTKASTGHTVQWKKGPEVLSQDGVLSIQEASYGNAGEYVCVGAVPSVPGLMAQARVSLA
VRGKPIIEPPAVGEVEQEGDTVTLKCSTYAAPPPQFTWKPSGRESVSVDGNKVVSTVTLK
ATAQVMKDGVTCEASNEHGADSKTFAVSLKRAIDNSADRVLLSGNPALTSAGEQQGGSSG
VVVAVVICVLLLLLLVALIYFLSKKSKLPCSKKDSKEV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacggaacctttctcgcgtgcaccttgctgctctgtgcatttcaagtttgcagcggc
gacgtgaaggtgaaagcggatccaaaagtggaggtgttgaaaggagagaccgccaaactg
tcgtgcacgtacaccgtctcacaagagtcaagcaacaccatcgtggagtggtacatcgag
gagaacggggccaggaagcgcgtggcgttcctcagcggcggcaaaggaaaaagcgacgaa
gggacccctctgactgggagggtctccctcggagacgacttctccctgaccatctcctcc
gtccagccctccgacgagctggtcttcatatgccaggtcaccgccgggcccgccggggtc
ggagacgccaccaccatgctcaaagtcttcttcgcccccgagaagccgcaactcaccaag
ccgtcgagtcaggccatctccgcgggacagaccaccagctccgagatcggcacctgtgag
acgatgaacggacacccgccccccaggatcatctggttcaaagacgaccagccgctcccc
gaggtcaaggaccggaaggagaagacctacatggtttcctcagtggtgaaggaggcctct
ggtctctacacggtcaggaacaccctctacatgcagcccaagaaggccgacaaggactcg
gtgttccagtgcatcgtggagtacagcatgccgggggagcagatcaggcagaagaagtcc
gacaccatcaccatcaacctcaactatccctccgagaaagcgagcttctccctcgtctac
aagggtcccgtcaaagagggcgacgacgtcaccatgaagtgtgagacggacggaaacccg
cagcccgagatcgacttcaccaaagacggaaaagccatcagcggtcagggcggcctgctg
gtcctcaagtcggtgaagcgcacggaggccggtgtgtacgagtgcacggccaccgacttc
gacaacctggacgccgacctcagcgggaccatcaacctgaccgtcaactacatcgacccg
gtgagcgtgacccctgcggagcctcaggtggtgaagctgggggacaaggtggagtggcac
tgcaagaccaaggcctccaccggccacacggtgcagtggaaaaagggccccgaggtgctc
tcccaggacggcgtactgtcaatacaagaggcctcctacggtaacgccggagagtacgtg
tgtgtcggagccgtgccgtcggtgccgggcctgatggcccaggcccgtgtgagcctcgct
gtcagaggaaagccgataatcgagcctcctgctgtcggagaggtggagcaggaaggggac
acggtgactctgaagtgctccacctacgccgcccccccccctcagttcacctggaagccg
tcggggagagagtcggtgtcggtggacggaaacaaggtggtgagcaccgtgaccctgaag
gccaccgcccaggtcatgaaggacggcgtcacctgcgaggcctccaacgagcacggagcc
gacagcaagaccttcgccgtgtctctcaagagagcgattgacaactcggccgacagagtg
ctgctctctggaaacccggcgcttacgtcagcgggcgagcagcaggggggctccagcggc
gtggtggtcgccgtggtgatttgtgtcctgctgctcctgctgctggtggcgctcatctac
ttcctgagcaagaagagcaagctgccctgcagcaagaaggacagcaaggaagtgtga
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