Pungitius pungitius (ninespine stickleback): 119197930
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Entry
119197930 CDS
T07626
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119197930 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119197930 (snx27b)
Membrane trafficking [BR:
ppug04131
]
Protein recycling
Others
Others
119197930 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
119197930 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
SNX17-31_F2_FERM
PDZ_2
SNX17_FERM_C
USP7_C2
VCPO_N
VirE3
Motif
Other DBs
NCBI-GeneID:
119197930
NCBI-ProteinID:
XP_037310542
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All DBs
Position
11:complement(15049895..15058739)
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AA seq
577 aa
AA seq
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MADVEGQGICSTVPELPHPSSRNGSGSGNVTPDTGGGCQTATTVTSGPRLVRVVKSDSGY
GFNVRGQVSEGGQLRSINGELYPPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGAT
HKQVVDLIRAGERELALAVLSVPPQEADCLDPGDDISAQSCYDYSDKQAVPISVPSYKHT
ELNQEKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFAIFTFPKLPGKWPFSLSEQQLD
ARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTPLTVRVCK
NSTTDQVYQAVVMKLGMDSVTASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAIAGT
CLTLRKWLFTTEEEILLNDNQLAVNYFFHQAVDDVKKGFIKAEQKSYQLQKLAEQKKLSM
YMSLLRDCEGYNEIIFPHCSCDSRRKGQVITAISIRHFKLHACTEEGTLEARGDSMSNQV
IAFDWGEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKE
VEEEATDKDNKNCSKDEYFPAAEAQKGWRHLGREIVT
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgagggacaaggaatttgctcaacggtccctgagttgcctcacccttct
tctcgcaacggctccggtagcggtaacgttacaccggacaccggcggcggctgccagacg
gcaacaaccgttacttcgggcccgcggctagtgcgagtagtgaagtctgactctggctac
ggtttcaatgtccggggacaagttagcgagggcggacagctgcggagcatcaacggggaa
ctgtaccctcctctgcagcatgtcagcgctgtcctaccgggaggtgccgccgacagagcc
ggtatttcgaagggagacaggattctcgaagttaatggtgtgaatgtagagggagcgacc
cacaagcaggtggtggacctgatccgggctggggagagggagctggcgctggccgtgctg
tccgtccctccccaggaggccgactgcttggatccgggagacgacatttcagcccagtcc
tgctacgactactccgacaagcaggccgtccccatctctgtgccgagctacaaacacacc
gaactcaaccaggaaaagtttgtggtatacaatgtgtacatggcaggccggcagctgtgc
tccaagcgttaccgcgagtttgtaatcctacaccaaaacctgaagagggagttcgccatc
tttacgttccccaagctgcccgggaaatggcctttttccttgtcggagcagcagcttgac
gcgcgacgcagaggccttgaagaatacctggagaaagtgtgctccgtacgggtgattgga
gaaagtgacatcatgcaggagttcctgtctgaatcggatgagaactataacggcgtgtca
gatgtggagttgaggatagcgatgccagacaaaaccccgctcactgttagagtttgcaaa
aattctaccactgaccaggtgtaccaggctgtggtgatgaagctggggatggacagcgta
acagccagctattttgctctgtttgaggtcatcaaccacacctttgtgcgaaagctcgcc
ccgaacgagttcccccacaaactgtatgtgcagaactacacgtcggccatcgcaggaacc
tgcctcaccctgcgcaagtggctcttcactacggaagaggagattctgctcaatgacaac
cagcttgctgtcaactacttctttcaccaggctgtagatgatgtgaagaaaggcttcatc
aaagcagagcagaagtcctaccagctgcaaaagctggctgagcagaagaagctgtccatg
tatatgagcttgttgagggactgcgagggctacaatgagatcatattcccacactgttcc
tgcgactcccgacgcaaaggccaggtcatcacagccatcagtattcgccacttcaagctc
cacgcttgcaccgaggaagggacactcgaggcaaggggcgactccatgtcgaaccaggtg
attgcatttgattggggggaaatgcagaggtgggacacagatgaagaaggcatggccttc
tgctttgaatatgctcgaggggagaagaaaccacgctgggtcaagatatttacaccctat
ttcaactacatgcacgagtgcttcgagagagtcttctgtgagctgaagtggaggaaggag
gtggaagaggaggctacagacaaggacaataagaactgcagtaaagatgaatattttcca
gctgctgaggcacagaagggatggaggcacctaggcagggagattgttacctag
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