Pungitius pungitius (ninespine stickleback): 119197960
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Entry
119197960 CDS
T07626
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119197960 (ascc3)
Enzymes [BR:
ppug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119197960 (ascc3)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
119197960 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
nSTAND3
T2SSE
AAA_19
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
119197960
NCBI-ProteinID:
XP_037310602
LinkDB
All DBs
Position
11:complement(7843468..7939611)
Genome browser
AA seq
2200 aa
AA seq
DB search
MSPPRLTGTLRSFSTVSKKEAFSGQLYDLKTKRLKRRELFAREGLTWKKISHFCTEHQDK
AEQQAASQQLKSLLLAAKDIVGNEDGQEAIESAAVFLFETFHNKDHVGTEETRAIKQMFG
PFPSSAAEASCACVARLLAPLGDSRVENFIQSLGSRHNPQRGSAFGRNIAFSYECYTLHP
LEDLPCSGIHEEDTSLDFINFFNNQQSARKASGEGRSSSGGALGSGDGGVLRTEVEKYLD
GGNMVSSSQEELCTSLFEMLASHKSDDELQNELFELLGPEGLEMISILLQRRSAIVDSLL
AIPTDRTSYPADMIRLVSGEVTKPTYGCQVTIQSEQEKQMMKLYRREEKRERKRGKGTDD
SDSSDAVLTFDPREMRTQREQALLTARREPILSRERVHERVRYPNVYDCYAEAAKMPAFV
GGARMMLPEGVRREDCKMYEEVEIPPNQPMATGFEEKPVYISELDEIAQLVFKGMKSLNR
IQSLVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIHQHLQPGGVIKKDEFKIVYVAP
MKALAAEMTNYFSKRLEPLGITVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGD
VALSQIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDVA
AFLHVNPYIGLFFFDSRFRPVPLGQTFVGIKSTNKIQQLRDMEEVCYNRVLEQVKGGHQV
MVFVHARNATVRTAMALIEMAKNHGEICCFQPGQGPDYGQCEKQIQRSRNKQMKEMFPEG
FGIHHAGMLRSDRSLMESMFSKGHLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGAL
VDLGILDVMQIFGRAGRPQFDKYGEGTIITTHEKLSHYLTLLTQQNPIESQFLDSLADNL
NAEIALGTVTNVEEAVKWLSYTYLYVRMRANPLAYGINHKAYQMDPSLELYRKELVVESG
RKLDKAKMIRFEERTGYYASTDMGRTASHFYIRYNTIETFNELFNSQRTEADILSIVSKA
EEFDQLKVRDEEMEELEQLLYNYCELPAAGGVENGYGKINVLLQTYISRGEVDSFSLISD
LSYVAQNAARIVKALFEIALRKRWPTMTYRLLTLCKVIDKRLWGFAHPLRQFSNLSHVIL
NRLEEKKLTVDKLKEMKKDEIGHMLHHVNIGLTVKQCVHQIPSITMEANVQPITRTVLRV
RLIVTPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEHFLLQKKQVLAGEPQHIVFTIP
IFEPLPSQYYIKVVSDRWLGAEAVCIINFQNLILPERHPPHTELLDLQPLPVTALGNREF
ESLYKFTHFNPIQTQIFHTLYHSDTNVLLGAPTGSGKTIAAEMAMFRVFNMYPTSKVVYI
APLKALVRERIEDWKIRIEEQLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSW
QNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSRTVRVVGLSTALANARD
LADWLGIGQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPAKPV
LIFVSSRRQTRLTALDLIAFLATEDNPKQWLHQDEREIEAIIATVRDSNLKLTLAFGIGM
HHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYFDGKSRRYVDY
PITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDHLNAE
IAAGTISSKQDAMDYITWTYFFRRLVMNPSYYSLEDISHESINKYLSNLVEKSLRELECS
YCIEIKEDDRTIEPLTYGRIASYYYLRHQTIGTFKERLKAELPIHELLSVLTDAEEYAEL
PVRHNEDQLNSQLAQQLPLKVNPHSYDSAHTKTHLLLQAHFSHTPLPCSDYNTDTKTVLD
NTIRICQAMLDVAANEGWLVTAISICNLVQMIIQGRWLHDSSLLTLPHIEQQHLYLFRKW
SNRKGRSHTAGFNLPIEGLPELIAACNGKESVFAAILGQEFHSTQIAQAWSFLSHLPVLE
VHMSVKGWWEQSQEQTERPLPAAGADPKDRSSWLDVHADQEYVLQVSLRRINAGQQRRKQ
DSKAQASRFPKAKDEGWFLIVGEVDRRELLAVKRVGYVRQRTAVSVAFYTPERTGKCIYT
LYLMSDSYLGLDQQYDILLNVTAASITAQVNTEVSDSRRL
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccgcggctcacaggcactttgcgctccttctccaccgtgagcaagaaggag
gccttcagcggacagctctacgacctgaagaccaaacgactgaagaggcgggagctgttt
gccagagagggcctcacatggaaaaagatttcccatttctgcactgagcatcaggacaaa
gccgaacagcaggctgccagtcagcaactaaagagcctccttctggcagccaaggatatt
gtggggaatgaagatggtcaggaggccattgaaagtgccgctgtctttctgtttgagacc
ttccacaacaaggaccacgtgggcacagaggagacccgggccatcaaacagatgttcggc
cccttcccgtcctctgcagctgaagcctcttgtgcgtgtgtagctcggctgctggctcca
ctcggagactccagagtggagaacttcatccaatccctgggctcgcgtcacaacccccaa
cgaggctctgctttcggacgcaacatcgccttttcctatgagtgctacacgctgcaccct
ctggaggacctgccctgctctggcatccacgaggaggacacaagtctggacttcatcaac
ttcttcaacaaccagcagagcgcgagaaaggccagtggggaagggcgctccagctctgga
ggagctctgggctctggggatggaggtgtgcttagaacagaggtggagaagtatctggat
ggaggcaacatggtctcgtccagccaagaggagctgtgcacgtccctctttgagatgctg
gcctcccacaagagcgacgatgagctgcagaatgagctgtttgagctgctgggcccagag
gggctggagatgatctccatcctcctccagcgaagatcggccatcgtcgactccctcctc
gccatcccaactgacaggaccagctacccagcagatatgatccggttggtcagtggcgaa
gtgaccaagcccacctatgggtgccaggtgaccatccagtcagagcaggagaaacagatg
atgaaactgtaccgcagggaggagaagagagagaggaagagaggcaaaggaacggatgac
agcgactcctcagatgctgtcctgacctttgaccccagagagatgagaactcagcgggag
caggctctgttgacggcccggcgtgaacctatactgagcagagaaagagtgcatgaacgt
gtccgctatcccaacgtctacgactgctacgcagaggccgctaagatgcccgcctttgta
ggaggagccaggatgatgcttcctgagggagtccgtagagaagactgtaagatgtatgag
gaggtggagatcccacccaaccaacccatggccaccggcttcgaagagaagcctgtctac
atctctgaactagatgagatcgcccagctggtgttcaaggggatgaagagtctcaacagg
atccagtccctggtctttgagacggcttacaacaccaatgaaaacctcctcatctgtgcc
ccaactggcgcgggtaagaccaacatcgccatgctgacggtcctccacgagatccaccag
cacctgcagccggggggcgtcatcaagaaggatgagttcaagatcgtatatgtggctcct
atgaaggccttggcagctgagatgacaaattacttcagtaagcgactggagccactgggc
atcactgttaaagaactcactggagacatgcagctaaccaaaggagagatcctacggaca
cagatgttggtgacaactccagagaagtgggatgtcgtgactagaaagagtgttggcgat
gtggctctctcccagattgtgcgtctcctaatcctggatgaagtgcaccttctccatgaa
gacagaggaccggttctggagagcttggtggcccggaccatcagacaggtggaatccacc
cagagtatgatcaggatcctgggactgtcggcaacgttgcccaactacctggatgtggcc
gccttcctgcacgtcaacccctacatcggcctcttcttctttgacagtcgcttcagaccg
gtgccccttggacagacctttgttggcatcaaatccactaacaagatccagcagctccgt
gacatggaggaggtgtgctacaacagagttctggagcaggttaaaggcggtcatcaggtg
atggtgtttgtccacgctcgtaatgccacagtgagaacggctatggctctgatcgagatg
gccaagaaccatggagaaatatgctgcttccagccgggccagggtccagactacggccag
tgtgagaagcagatccagcgctccagaaataagcagatgaaggagatgttcccagaaggc
tttgggatccatcatgctggcatgctgcggtccgaccgcagcctgatggagagcatgttc
tccaagggccacctcaaggtgctggtctgtactgccaccctcgcctggggagtgaacctg
ccggcccatgcagtcatcatcaagggcactcagatctacgatgccaagcgcggggccctg
gtggacctgggcatcctggatgtcatgcagatctttgggcgcgccggtcgcccgcagttc
gacaagtacggggagggcaccatcatcaccacccatgagaagctgagccactacttgacc
ctgctcacccagcagaaccccatcgagagccagttcctggacagcctggccgacaacctc
aacgctgagatcgctctggggactgtcaccaacgtggaggaggcagtgaagtggctcagc
tatacttacctctatgttcgtatgagggccaacccactcgcttacggcatcaaccacaag
gcctatcagatggatccttccttggagctctacaggaaggagcttgtagtggagtcaggc
agaaagctggataaagccaaaatgatccgcttcgaggagcgcaccggctactatgcctcc
actgacatgggcaggaccgcaagccacttctacatcagatacaacaccatagagacgttc
aatgaacttttcaactctcagcggacagaagctgacatcctcagcattgtgtccaaggcg
gaggagtttgatcagctaaaggtccgtgatgaggagatggaggaactggaacagttgctg
tataactactgtgagctgccggctgcaggtggggtggagaacggatatggcaagatcaac
gttctcctccagacgtacatcagccgaggagaagtggacagcttctccctcatctcagat
ctgtcctatgtggcacagaatgctgctcggatcgtcaaggctttgtttgagattgccctc
agaaagcggtggccaaccatgacctaccgactgctcaccctctgtaaggtcatcgataag
cggctgtggggctttgcccaccctctccgccagttctccaacctgagccatgttatactc
aaccgcttggaagagaagaagctaaccgtggacaaactgaaggaaatgaagaaggatgag
atcggtcacatgctgcaccacgtcaacattggcctaacagtcaaacagtgtgtccaccag
atcccctccatcacaatggaggccaacgttcagccaatcacacgcactgtcctacgggtg
cgcctcattgtcacgccggactttcgctggaacgatcaggtgcacggctcggtgggggag
ccgtggtggctgtgggtggaggatcccatcaatgatcacatctaccactcggagcacttc
ctcctgcagaagaaacaggtgttagcaggagagcctcagcacatagtgttcaccatcccc
atctttgagccgctgccctctcagtactacatcaaggtggtgtctgaccgctggctcggg
gccgaggccgtctgcatcattaacttccagaacctcatcttgcctgagagacacccccca
cacactgagctgctggacctgcagccgctgccggtgaccgctttggggaaccgggagttt
gagagcctgtacaagttcacccacttcaaccccatccagactcagatcttccacacgctg
tatcacagcgacaccaacgtcctgctgggggcgccaacgggctctggaaaaaccatcgcc
gcagagatggccatgttcagagtcttcaacatgtatcccacttctaaggtggtgtacatt
gcccctctgaaagccctggtcagagagaggattgaggactggaagatccggattgaggag
cagctggggaagaaagtggtggagctgacgggtgacgtgactccagacatgagagccata
gcgcaggccgacctcattgtcaccacaccagagaagtgggacggggtgagccgaagctgg
cagaaccgcagttacgtccagaaagtggccatcctcatcatcgatgagatccacctgctg
ggtgaggacagaggtcctgtgctggaggtcatcgtgtcccggaccaacttcatctcctcc
cacacatcgaggaccgtacgggtagtcggtctgtccaccgctctggccaacgcccgggac
ctggctgactggctgggaatcggacaggtgggtttgtttaacttccgtccgtctgttcgc
cccgtaccgctggaagttcacatccatggtttcccgggacaacactactgcccccgcatg
gccagcatgaacaagcctaccttccaagcgatccgaagtcactccccagccaagccggtg
ctgatctttgtctcatcacgacggcaaacgcggctcactgctctggacctcatcgccttc
ctggccacggaggacaaccccaagcagtggctgcaccaggacgagagagagatagaggcg
atcatcgccaccgtgcgggattccaacctgaagctaacgctggcctttgggatcggcatg
catcacgccggcctgcatgagagggacaggaagacggtggaggagctgtttgtcaactgt
aagatccaggttctgattgccaccagtactctggcctggggggtgaacttccctgctcac
ctggtggttgttaagggaactgaatactttgatggcaaatccaggcgctacgtggactac
cccattacagatgttctgcagatgatggggcgagcaggtcggcctcagtttgatgaccag
ggcaaagccgttatcctcgtccatgacatcaagaaggatttctacaagaagttcctctat
gagccttttcccgtggagtccagcctcctcagtgtgctgtcagaccatctgaatgctgag
attgctgcaggaaccatctcatccaaacaggatgccatggactacatcacgtggacgtac
ttcttcaggcggctggtgatgaaccccagttattacagcctagaagacatcagccacgag
tccatcaacaaatacttgtccaacctggtggagaaaagcctgcgggagctggagtgctct
tactgcatagagataaaggaggacgatcggaccatcgagccgctgacctacggtcgcatc
gcctcctattactacttgaggcatcagaccatcggcacgtttaaagagcgactgaaggcg
gagctgcccatccacgagctgctctccgttctgacggatgcagaggagtatgcagagctg
cccgtcagacacaatgaggaccagctgaatagccagctggctcagcagctccccctgaag
gtcaacccccattcctatgacagtgcccacaccaagacccacctgctgctgcaagcccac
tttagccacaccccactgccgtgcagcgactacaacacagataccaagacggtactggac
aacaccatccgaatctgtcaggcaatgctggatgtagcagccaacgaaggctggctggtc
acagccatcagcatctgtaacctggtgcagatgatcatccagggccgctggctgcacgac
tcctctctgctcacgctgccacatattgagcaacaacacctctacctgttcaggaaatgg
tctaaccggaaggggaggagccacacagcaggcttcaacttgcccatcgaaggacttcct
gaactaattgctgcctgcaatgggaaggaaagtgtttttgctgcaatccttggtcaagag
tttcattctactcagattgcccaggcctggtccttcctgagtcacctcccagtgctggag
gtgcacatgagtgtgaagggctggtgggagcagagccaggagcagacagagcgcccactg
ccagcagcaggagccgaccccaaagacaggagcagctggctggacgtccacgctgaccag
gagtacgtcctgcaggtgtccctgaggcgcatcaacgcgggtcagcagaggaggaagcag
gacagtaaggcccaggcgtccaggttccccaaggcgaaggatgaaggctggttcctgatc
gtgggcgaggtggaccgcagggagctgctggctgtcaagcgggtgggatacgtgcgccag
cgcacagccgtgtccgtggccttctacacgcccgagaggactggaaagtgtatctacact
ctgtacctgatgagtgacagctaccttgggctggaccagcagtatgacatcctcctgaac
gtgacagcagccagcatcacggctcaggtcaacacggaggtgtctgactccagacgtctg
tga
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integrated database retrieval system
