Pungitius pungitius (ninespine stickleback): 119197964
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Entry
119197964 CDS
T07626
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119197964 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119197964 (trip13)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
119197964 (trip13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_25
AAA_18
AAA_14
Viral_helicase1
TIP49
AAA_24
NPHP3_N
AAA_7
AAA_5
AAA_RNF213_4
AAA_28
TsaE
ATPase_2
RNA_helicase
Cytidylate_kin
RuvB_N
NACHT
AAA_33
ABC_tran
AAA_17
IstB_IS21
AAA_11
AAA_30
bpMoxR
DUF815
ATPase
SLFN-g3_helicase
Mg_chelatase
AAA_19
Rad17
NB-ARC
DUF6393
PduV-EutP
nSTAND1
Sigma54_activat
PhoH
nSTAND6
NTPase_1
AAA_3
Motif
Other DBs
NCBI-GeneID:
119197964
NCBI-ProteinID:
XP_037310607
LinkDB
All DBs
Position
11:complement(11885106..11889865)
Genome browser
AA seq
418 aa
AA seq
DB search
MEFENHKQNIDVDVHVKSHSTAKKSEVRIQVLGLLNRHSTLFGNYRWTEFDKEFLQKNVE
SVAIVDQDELITQPLDLNSYSVSIHIFTLNEDGPSTLSLEEDEELSAANHWLLPAAEFNG
IWESLVYENGVKTQLLNYISTTIYFSDKNVDSNLISWNRVVLLHGPPGTGKTSLCKALAQ
KLSIRLSSRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKEALVFVLIDEV
ESLTAARSASQSGTEPSDAIRVVNSVLTQLDQIKRHSNVVILTTSNVTQKIDLAFVDRAD
IKQYIGPPSEKGIYNIYLSCLEELMKCQIICPRQQLFTMFELETMGFAMSEVSEHSLSLR
DIAVRSKGLSGRALRKLPFLAHALFVMTPTVTLEMFLEAMRQAVDKQMEEKANLVNAV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgaaaatcacaaacaaaacattgatgtcgacgttcacgttaaatctcacagc
acagctaaaaagtccgaggtgaggatacaggtcctcgggctgctcaatcgccacagcacg
ctctttggaaactacagatggacagagtttgataaggaattcctgcagaaaaacgttgaa
tctgtggctattgttgatcaagatgaattgataacacagccccttgatttgaatagctac
tcggtctccattcacatcttcaccctgaatgaggatggacccagcacgctcagtctggag
gaggatgaagagctttcagccgccaatcactggttgctgccagcagctgaattcaatggg
atttgggagagtctggtatacgagaatggagtcaaaacccagctcctgaattacatttcc
acaacaatttacttctcggacaaaaatgttgacagtaacttgatttcgtggaaccgcgtt
gtgctgcttcacggccccccgggcacagggaaaacgtcactgtgcaaagctctggcccag
aagctgtccatcagactgtccagtcggtattcttatgggcaatttgtcgagataaacagc
cacagcttgttctcaaagtggttctcagagagcggtaaattggtcacaaagatgtttcaa
aagatccaacaactgatagacgacaaagaagctctcgtgttcgttctgatcgatgaggtg
gagagtctgacagcagctaggagcgcctcccagtcgggaacagagccctccgacgccatc
cgagtggtcaactcggttctcacccaactggaccagatcaaaagacattccaatgttgtg
atcctgacaacctccaatgtgacacagaagatagacctggcgtttgtggacagagctgac
atcaagcagtacatcggacctccttctgagaagggcatttacaacatctacctctcctgt
ctggaggagctgatgaagtgccagatcatctgcccccggcagcagctgttcaccatgttt
gagctggagacgatgggcttcgccatgagcgaggtgtccgaacacagtctgagcctgagg
gacatcgctgtaaggagcaaaggtttgagtggaagagctctcaggaagttgccgtttctg
gcccacgcgctgtttgtcatgacgccgacggtgacccttgagatgttcctggaggcgatg
aggcaagccgtggacaaacagatggaggagaaggctaacctggtcaatgcggtttga
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