Pungitius pungitius (ninespine stickleback): 119197985
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Entry
119197985 CDS
T07626
Symbol
si:dkey-22o22.2
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119197985 (si:dkey-22o22.2)
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Cadherin related
119197985 (si:dkey-22o22.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
Cadherin_4
EGF
Cadherin_pro
Cadherin_CELSR2_9th
hEGF
Y_Y_Y
He_PIG
Motif
Other DBs
NCBI-GeneID:
119197985
NCBI-ProteinID:
XP_037310637
LinkDB
All DBs
Position
11:19442898..19489434
Genome browser
AA seq
2915 aa
AA seq
DB search
MNRAETGPVLLLHLLLVLLHAPPPCLSARPRPPARYYGQITENSPAGTPVQGVLLPVGGA
GCPGADLDGSLTGDYASDFRLIRLRGARLGHLGLVSAKALDREFIAMYELTVELPPRCHR
RPAAVQVEVSDRNDNVPRFTGGNQTVEADELTPLGTELARFYAQDGDAQRNGRVTFYAAP
ESHLLHVVPQTGQVRLVGSLLGVSRVTLRLLARDDGDVPREGDPAFLRIEVRRSGGAPPR
RARALTEELTYTVTVPDHAGVRDLVFTVPDQKFERRWFEVVSEPEPPVRIERDSGRLYLA
RALPEPAEVLVKIHNAQGNEWYLCRLTLSTSSQAHLQWAMFPSPYLGTVGPEAAPGSVVY
RLSVRQRDGEPGQAQFLLLGGGEGCFEVDRRSGDIITTGQPLTPSKEYLLRVQATEGGRG
GPPVTVSVLAGYRPPQFTNATYSLNVPESAAVGPPVSVVQAVSFQKKNLSYMLLVNPGNL
FSINQESGALSLTRAVDYESGHNLHNLQVRAAEPDTGLSSLAEVVVSVTDENDCTPEFLQ
SIYTQDNVPESIAPGSSLLQVLARDCDSGANSELSYFVHGEDFDITSGGVVSPARRLDYE
RPNHIYEFVVVAVDAGTPPRTGTASIRIRLTNSNDEAPVFSQNVYKTFLSEDAGPDTLVA
IVHANDPDGDSVSYAITGGNEDSNFLLDNQKGIIKLRRSPPPRLKGPRYVLNITATDDNA
SGGPYPLSSSAQVVVGINDINNNKPLFHECQNYSHHAVVLENQPPGTFVLRVQAHDADMG
VNGEVKYGLVQRDGVSSGFAIDPDTGVITTTVSFDRERRRECTLSVTATDQAEEPLIGIC
QVTVVIGDQNDNDPKFENSRYQYFLREDTAVGTSFLRAAAHDADHGSNAAITYALSNQEP
AYLHIHPSTGWIYVNHPISQTSRISRQIVASDGGGRSSWVELSVVITNVHNQPPVWERPE
YHVTLPENTARDARALTIKATSPLGDPRVTYNLEDGQVPETNMPVRFYIKPNRADGSASL
LVAENLDYETTPLFALRVRVQNVAAVPLASFTTVYVNVTDVNDNVPFFLSSTYEATVPEG
AEVGTSVAQVSATDLDSGLHGMVHYVILKDESGDSQFFSIDPLSGVVVTRASFDREQKAS
YLIEVQSQDGSTSARPGQQGQPNTDTAYVRIFVTDVNDNAPAFSRPAYEVSVEEDEEVGF
VLITVTANDEDEGANAKLRYQITSGNHMGAFGVEPEVGAVYVARPLDYETERRYELRLVA
SDGKWENETLVTVQVGNRNDEAPVFSRTEYRAAVSEELSQLPVEVLQVSAVDPDQEADQT
ALRYSLHGQGAGSEFTIDERTGRISAQRRLDREERPAWRFLVLATDEGGAGLTGFADVLM
EVTNVNDNAPFFPCPALEADGCFAGRVPENSPADTSVMEMRAVDLDIPNEGESAALTYSI
IKNVRNEINLDLFSINASTGAIHTVLRSLDREAEERYLVVVEARDGGGLAGTGTATITVS
DVNDHPPVFTQRLYSAQVTEDMEVNSEVLVVSATDGDEGENAVVTFSIVGGDADRKFFVE
TDKVNRRGVIKLKKKVDFEKPRERTFNLTLKAEDADFFSLAHCLVQVEDTNDHAPVFLPQ
FYESAAMSEDVSVGTIVAQVTASDLDSGQNGRFSYSILRESDPYSQFLVDQSGWVVVADS
LDREKTSQHRIVVLATDAGGPPMTGTAIVMVTVLDVNDNGPEFEVPYRPVVWENAPAPQS
VRMNETSLLLHATDRDTSANGAPISIRLLMLTSDATNFNLTDFRNGSAAVTALRTFDRER
QKEYRLPILMIDSGSPPMSSTSTLTVVIGDRNDHPHSPGHTNFIVYSHEGVLPTTALGRV
RSLDLDDWSEKVYRFEGKPSRWFSLNQTSGLLSVREGAPPGSYRLQVRVSDYTWPSVTSS
AQVEVRELQPAALRNAASLRLLNVSVEEFFGGGGAESLFSRLGRSLAELLQTSPANVQIF
SVKEGRRGGGEALAVWFSARGPAPYRKEKLLGYVAASRAQVEAALGVSISQVGVDECPFT
DCGRSGGCSTDVSFGPVPVALGAGSAAALVSLPAAVTARCGCGGREAAHLPCSSYPNNPC
RNGGACQDGPLGYRCNCPPMLDGPECQQTKHSFGGEGYAWFPPIMPCFQSHISLEFLAES
ANGLLLYDGPLGPAHSGEQEDFIAVELRNGVPALSINHGSGALTLQLPPRSAVTLRRWHR
LDVVSDGKAVQLILDQCGGAAVNELEAGGEDSQETDESGCRAAGETPGDQRYLNVFQPLQ
LGGIKETSPHRRYRGFTGCIRNLVVDSQVYDLASPGESVDSAPGCRLTDAVCLTAAGPSC
GAHSSCVASWGSFSCVCEAGYSGPQCDTTVPEFSFSSGSVVRFQLRGGGSSRRSDVRLLL
RTRSSSGSLLSVASRESGECIILEIAEGLLSVRADLADGAHVLRLPGQRVDVGQCVQVGL
GRHDNLFTLRLEQGGGSREVQARLGSRREIVLHPTSVTVGNDFQGCLRDVRFNAQVLPLE
GRSQDSVTVLERRGITSGCSSDACTGQPCSSPLRCVDLWRKHQCRCPGGLVTVTEDSGQQ
RCVPSPCGVSSCRNGGVCQALTPDSYRCRCQDGFSGQRCEQGQVKGHRLAALSPSSILAI
SMCLLVFFAVLVAVTVWNQKGSRNKFRKRGVYHIPTEHESWEDIRENILNYNEEGGGEQD
QNGYDITELKRPLCSSLSQSSSCTTAPLVKCSPGSQEEVHPSGSSCSSGAPYLSIPHHLH
QHHHHQQHLHHTAGSHGDAPSGPRPHVDFKSYVERIIWEADSGGEALPVDAYHVWCVEGS
GSAAGSLSSLGSAASRRNILIAPGDEEEEEEGQGGSACDRLSQWGPKFTALSEMYDRPPL
APTYRDAVAYVQRSCSQERLPHHHYGAPHCAKTLR
NT seq
8748 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagctgaaaccggaccggttctcctcctccacctcctcctggtgctgcttcac
gcgcccccgccgtgtctgtccgcgcggccgcgacctccagcgcgctactacggacaaatc
accgagaactccccggccgggacgccggtgcagggggtgctgctgccggtcgggggagca
ggctgccccggcgcggacctcgacggcagcctgacgggggattacgcgtcggacttcagg
ctcattcgcctccgcggggcccgtctggggcatctggggctggtctccgccaaagcgctg
gaccgggagttcatagcgatgtacgagctgacggtggagcttccgccgcggtgtcacagg
cgaccggccgccgtccaggtcgaagtgtcggacaggaacgacaacgtgccccggttcacc
ggcgggaaccagacggtggaggcggacgagctgaccccgctcggcaccgagctggcccgc
ttctacgcgcaggacggggacgcgcagaggaacggacgcgtcacgttttacgcggcgccg
gagtcccacctgctccacgtggtcccacagaccgggcaggtgaggctggtcgggtccctg
ctcggtgtcagccgggtgactctgcgcctcctcgcgcgcgacgacggagacgtgccacgt
gagggtgatccggcgttcctgcgcatcgaggtccgccggtccggcggcgctccgccgcgg
cgcgcgcgcgctctgaccgaggagctcacctacaccgtgaccgtacccgaccacgctgga
gtccgggacctggtcttcacggtgccggaccagaagttcgagcggcgctggttcgaggtg
gtgtccgagcccgagccgccggtccgcatcgagcgggactcggggcgtctgtacctggcg
cgcgcgctgccggagcccgccgaggttctggtgaagatccacaacgcgcaaggcaacgag
tggtacctgtgcaggttgaccctgagcacgtccagtcaggcccacctgcagtgggccatg
tttccgtcgccgtacctgggcaccgtagggcctgaggctgcgccgggctcagtggtctac
cgactgtctgtacggcagcgggacggcgagcctggacaggcccagttcctcttactgggc
ggtggggaggggtgcttcgaggtggaccgtcgctccggcgacatcataaccacaggacag
cccctgacccccagcaaggaatacctgctgcgggtgcaggccaccgagggggggcgcggg
ggcccgccggtcacggtgtcggtgctcgccggctaccggccgccgcagttcaccaacgcc
acctacagcctgaacgtcccagagagcgccgccgtcggcccgcccgtctcggtggtccag
gctgtctccttccagaagaagaacctgtcctacatgttgctggtgaatcctgggaatcta
ttcagcatcaaccaggagagcggagcactcagcctcaccagggctgtggactacgagagc
ggacacaacctccacaacctgcaggtccgcgcagccgaacccgacaccggcctcagcagc
ctggcagaggtggtcgtcagcgtgacggatgagaacgactgcacgccggagttcctccag
tccatctacacccaagacaacgtacctgagagcatcgcacctggaagctccctgctgcag
gttctggcccgtgactgtgactccggtgcaaactcggagctctcttactttgttcacggt
gaggactttgacatcacatcagggggcgtggtcagccctgcccgtcgccttgactacgag
cgacccaatcacatctacgagtttgtggtggtcgccgtggacgcggggacgcccccccgc
acgggcacggcctccatccgaatccgactcaccaacagcaacgacgaggcgcccgtcttc
tcccagaacgtgtataagaccttcctcagtgaggacgccggtccggatacgctggtcgcc
atcgttcacgccaacgacccggatggagactccgtctcttacgccatcaccgggggcaac
gaggacagcaacttcctgttagacaaccagaagggcatcatcaagctgcggaggagcccc
cccccgaggctcaaggggccgcgctacgtcctcaacatcacggccacggacgacaacgca
tcgggggggccgtacccgctcagcagctccgcccaggtcgtcgtggggatcaacgacatc
aacaacaacaagccgctgttccacgagtgtcagaactacagtcatcacgccgtggttctg
gagaaccagcccccaggtaccttcgtgctgcgcgtccaggcccacgacgccgacatgggg
gtcaacggggaggtcaagtacggcctcgtgcagcgggacggggtgtcctctgggttcgcc
atcgaccccgacactggcgtcatcaccaccacggtgagcttcgaccgagagcgccggagg
gagtgcacgctgtcggtgacggccacggatcaggccgaggagccgctcattggcatctgt
caggtcaccgtcgtcatcggcgaccagaacgacaacgaccccaagttcgaaaacagccgc
taccagtacttcctgcgtgaggacacagcggtgggaaccagcttcctgcgggcggcggcg
cacgacgccgaccatgggagcaacgcggccatcacctacgctctgtccaatcaggagccg
gcttacctgcacatccaccccagcacgggctggatctacgtcaaccaccccatctctcag
acgtcgaggatcagccggcagatcgtggcgtctgacggaggtgggcggagcagctgggtg
gagctcagcgtcgtcatcaccaacgtgcacaaccagccgccggtgtgggagcggcccgag
taccacgtcacgctgcccgagaacacggcgcgggacgccagggcgctgaccatcaaggcg
acgtcgcccctcggtgacccccgggtgacctacaacctggaggacggccaggtgccggag
accaacatgccggtgcgcttctacatcaagcccaaccgggcggacggctcggcgtccctg
ctggtggccgagaacctggactacgagaccacgcccctcttcgccctgcgggtccgggtc
cagaacgtcgccgccgtgccgctggcgtccttcaccaccgtctacgtcaacgtgacggac
gtcaacgacaacgtccctttcttcctgtcctccacctacgaggcgacggtgccggagggg
gccgaggtcggcacctcggtggctcaggtctcggccacggatctggactctggtctgcac
gggatggtccactatgtgatcctgaaggacgagagcggcgactctcagttcttcagcatc
gacccgctgagcggcgtcgtcgtgactcgcgcctccttcgaccgcgagcagaaggcctcc
tacctcatcgaggtgcagtcgcaggacggctccacgtcggccagaccgggccagcaggga
caacccaacaccgacacggcgtacgtcaggatcttcgtcacagacgtcaacgacaacgct
ccggcgttctcccggccggcctacgaggtgagcgttgaggaagacgaggaggttggcttc
gtcctcatcaccgtcaccgccaacgacgaggacgaaggtgccaacgccaagctgcggtac
cagatcacctctggaaaccacatgggggccttcggcgtggagcccgaggtcggcgccgtc
tacgtggcccggccgctggactacgagacggagcggcgctacgagctccgcctggtggcc
tccgacgggaagtgggagaacgagacgctggtgacggtgcaggtggggaaccgcaacgac
gaggcgcccgtcttcagccggacggagtaccgcgccgccgtgagcgaggagctcagccag
ctgcccgtggaggtgctgcaggtgtcggctgtggacccggaccaggaggccgaccagacc
gccctccgctactccctccatggccagggcgccggcagcgagttcaccattgacgaacgc
actggaaggatctccgctcagcgccggttggaccgcgaggagcgcccggcctggaggttc
ctcgttctggccacggacgaaggaggggcgggactcacagggttcgccgacgtgctgatg
gaggtcacaaacgtcaacgacaacgcgcccttcttcccgtgcccggcgctggaggcggac
gggtgttttgctggccgggtgcccgagaactcccccgccgacacatccgtcatggagatg
cgcgccgtggacctggacatccccaacgagggcgagagcgctgcactgacctacagcatc
atcaagaacgtccgcaacgagatcaacctcgacctgttctccatcaacgccagcacgggc
gccatccacacggtgctgcgttcgctggacagggaggcggaggagcgctatctggtcgtg
gtggaggcccgggatggaggcgggttggcgggaacggggacggccaccatcacggtttca
gacgtcaacgatcacccacccgtcttcacccagaggctctacagcgctcaggtgacggag
gacatggaagtgaacagtgaggtcctggtagtgtccgccacggacggagacgagggggag
aacgccgtggtgaccttcagcatcgttggcggcgacgcggaccggaagttcttcgtggaa
acggacaaagtgaaccgtcgcggcgtcataaaactcaagaagaaggtggacttcgagaag
ccccgcgagaggacgttcaatctgacgctgaaggccgaagatgccgatttcttcagcctg
gcccactgtctcgttcaggtggaggacaccaacgaccacgcgcctgtctttctgccgcaa
ttctatgagtcagcggccatgtctgaggacgtttccgtggggacaatcgttgctcaggtt
acggcttctgatctggactcgggtcagaatggacgcttttcctacagcattttgagagag
tcggacccgtacagtcagttcctggtggaccagtccggttgggtggtcgtggccgattcc
ctcgacagggagaaaacctcacagcaccggatcgtggtcctcgccacagacgccggcggc
ccacccatgaccggcacagccatcgtcatggtaactgtactggacgtgaacgataacggg
ccggagttcgaggtgccctacaggccggtcgtttgggagaacgcgccggcgccgcagtcg
gtcagaatgaacgagacctccctgctcctccacgccaccgaccgggacacctccgccaac
ggcgcaccgatctccatacggctcctcatgctcacctcggacgccaccaacttcaacctg
acggactttcggaacggcagcgcggccgtcaccgccctccggaccttcgaccgcgagcgg
cagaaggagtaccgcctcccgatcctcatgattgacagcggctctcctccaatgagctcc
accagcacgctgaccgtcgtcattggcgacaggaacgaccacccccactcgccaggacac
accaacttcatcgtgtacagtcacgagggcgtcctcccaacgacggcgctcgggcgagtt
cgatccctcgacctcgacgactggagcgagaaggtgtaccgcttcgaaggaaaaccctcc
aggtggttcagcctgaaccagacctcgggtctgctcagcgtgagggagggggctcctccc
ggctcctaccgcctgcaggtgcgcgtgtcggactacacctggccctccgtcacctcctcg
gctcaggtggaggtgcgggagctgcagccagcggcgctgaggaacgccgcctctctgcgc
ctcctcaatgtgtcggtggaggagttcttcgggggggggggagccgagagcctcttctct
cgtctcggccgctctttggctgaactccttcagacgtcgccggccaacgtgcagatcttc
tctgtgaaggaggggcggcgaggggggggggaggcgctggccgtgtggttctcggctcgt
ggccccgccccctaccggaaggaaaagctgcttggctacgtggcggcgagcagagcgcag
gtggaggccgcgctgggcgtgtccatctcccaggtgggcgtggacgagtgtcccttcact
gactgcggtcggtccggaggctgcagcaccgacgtttccttcggtccggtccccgtggcg
ctcggtgccggatccgccgccgcgctggtgtcgctgccggccgcggtgacggcgcggtgc
ggctgcggcggtcgggaggccgcccacctgccctgctcctcctaccccaacaacccctgc
cgcaacgggggggcctgccaggacggcccgctggggtacaggtgtaattgtcctcccatg
ttggacgggcccgagtgccagcagaccaaacacagcttcggcggcgagggctacgcctgg
ttccctcccatcatgccttgctttcagagccacatctcgctggagttcctggccgagtcg
gccaatgggctgctgctgtatgacgggccgctaggccccgcccactccggcgagcaggag
gacttcatcgccgtcgagttgaggaacggcgttccggctctgagcatcaaccacgggtcg
ggggcgctgaccctgcagctcccgccccgatccgccgttactctccgccgctggcatcga
ctcgacgtggtcagcgacgggaaggccgtccagctgatcctggaccagtgtgggggggcg
gcggttaacgagctggaggccgggggggaggacagccaggagacggacgagtccggctgc
agagctgcaggagagacgccaggagaccagaggtatctcaatgtcttccagcctcttcag
ttgggaggaataaaggaaacatctcctcatcggcgttaccgcggcttcaccggctgcatc
cgcaacctggtggtggacagtcaggtgtacgacctggcgtctcccggtgagagcgtggac
agtgctccgggctgccggctcacggacgccgtctgcctgacggctgcgggaccgtcctgc
ggagctcactcctcctgtgtcgcctcctggggctccttcagctgtgtgtgtgaggcgggg
tactccggaccccagtgtgacaccaccgtcccagagttctccttctcctcgggcagcgtg
gtgcgttttcagctcagaggaggtggcagttctcgccgctcagacgtgcggctcctcctg
cggacccggtcctcctcgggctcgctgctctccgtggcgtcccgggagtccggcgagtgc
atcatcctggagattgccgagggcctcctctccgtccgcgccgacctcgccgacggcgcc
cacgtcttgcgcctccccggccagcgggtggacgtcggccaatgtgtgcaggttggcctg
ggtcgccacgacaacctgttcacgctcaggctggagcagggcgggggctcgcgggaggtg
caggcccggctggggagccggcgggagatcgtacttcacccgactagcgtgacggtcggc
aacgactttcagggttgtctgcgggacgttcgttttaacgctcaggtgctgcctctggag
gggcggagccaggactcagtgacggtgctggagaggcggggcatcacctctggttgctcc
agcgacgcctgcaccggccaaccgtgcagcagcccgctgcgctgcgtcgacctgtggagg
aagcaccagtgcaggtgccccggcggcctggtgacggtgacggaggactccgggcagcag
cgctgcgtgccgtcgccctgcggcgtctcatcctgccgtaacggcggcgtctgccaggcg
ctgacacccgacagctaccggtgccgctgccaggacggcttcagcggccagcgctgtgag
cagggccaggtcaaaggtcaccggctggccgccctcagccccagctccatcctggccatc
agcatgtgtctgctcgtcttcttcgcggtgctggtggccgtgacggtgtggaaccagaag
ggaagccgtaacaagttcaggaagcgaggagtttaccacatccccaccgagcacgagagc
tgggaggacatccgagaaaacatcctgaactacaacgaggagggggggggcgagcaggac
cagaacgggtatgacatcaccgagctgaagcgcccgctgtgctccagtctgtctcagtcc
tcctcctgcaccacggcgccgctcgtcaagtgctcccccggctcccaggaggaggtgcac
ccgtccggctcctcctgcagctccggagctccctacctcagcatcccgcaccacctccac
cagcaccaccaccaccagcagcacctccatcacactgccggctcccacggcgacgccccg
tcggggccgcgcccccacgtggactttaaaagctacgtggagcgaatcatctgggaggcg
gacagcggcggcgaggcgctgccggtggacgcgtaccacgtgtggtgcgtggagggctcg
gggtcggcggcaggaagcctcagctctctggggtcagctgcatcacgcaggaacatcctc
atcgcccccggagacgaggaggaggaggaggaagggcagggggggtcggcctgcgaccga
ctctctcagtggggcccaaagttcacagcgctgagcgagatgtacgaccggcccccgctg
gcccccacgtacagggacgccgtggcctacgtccagaggagctgcagccaagagcgcctg
ccccaccaccactatggggcgccacactgcgctaaaacactgcgctaa
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integrated database retrieval system
