Pungitius pungitius (ninespine stickleback): 119197993
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Entry
119197993 CDS
T07626
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B isoform X1
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119197993 (mex3b)
04121 Ubiquitin system [BR:
ppug04121
]
119197993 (mex3b)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119197993 (mex3b)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119197993 (mex3b)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119197993 (mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-C3HC4
Prok-RING_4
KH_2
RING_XB3-XBAT31
KH_DEAH11_2nd
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
119197993
NCBI-ProteinID:
XP_037310660
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All DBs
Position
4:4493446..4497902
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AA seq
528 aa
AA seq
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MPSSLFADSSAQGEVLQTALNQLSLLGLDNDENPCYDNQELWGRSVNMTECVPVPSSEHV
AEIVGRQGCKIKALRAKTNSYIKTPVRGEEPVFVVTGRREDVAMARREIISAAEHFSMIR
ASRNKNTSLNGSSTPSTGPPNLPGETTILVRVPYRVVGLVVGPKGATIKRIQEQTHTYIV
TPSRDKEPVFEVTGMPENVDRAREEIEAHITMRTGGVIELQDENDFHANGTDVGFDLHGH
ATLWSKPCAGITPNSLRKLFSNNCHNLSSSLGSVSTDSFFGNNSSRMANYIAPSPTLSYT
TNNNGNDNNNNNNIDLKTNCNGLIDQNEVSSPDCTNLSFDSSSGFDTSTPPGLLWSQYDS
GIAPSSAACSPPTSISVLFPTNTSTNSNGVVVSHSRVTGCTSQLGRLPSLQGPSLDPLAW
RVRSDLGRGSTSFSAYPSNMASLPGSQLPRVLCDSSASSSSSSSTSSGTSRKGSRDCSMC
FESEVIAALVPCGHNLFCMECANRICERNKPQCPVCHSRVTLAMRIFS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctctttgcagacagcagcgcccaaggagaagtcctgcagacagccctg
aaccagctctccctcctcggcttggacaacgatgagaacccctgttacgacaaccaagag
ctctggggaaggagcgtgaacatgaccgaatgcgtccctgttcccagctccgagcacgtg
gcagagattgtgggccgacagggttgcaagatcaaagcactgcgggcaaagaccaacagc
tacatcaagacaccggttcgaggcgaggagcctgtttttgtggtgacaggcaggagagag
gatgtggcaatggccaggagggagatcatctctgctgctgagcacttctccatgattcga
gcctccaggaacaaaaataccagcttgaacgggagcagcaccccgtctaccggaccccct
aacctgcccggagagaccaccatcctggtgcgggtgccttaccgtgtggtggggctggtt
gtaggacctaaaggtgcaaccatcaagcgcatccaggagcagacccacacctacattgtg
acacccagccgagacaaagagccggtgttcgaggtgaccggtatgccggagaacgtggac
cgagctcgcgaagagattgaagcccacataaccatgaggacagggggtgttattgagctt
caggatgaaaatgacttccatgccaacgggactgatgtgggttttgacttgcatggacac
gccactctgtggtctaagccctgcgccgggataaccccgaactcactgcgtaaactcttc
tccaacaattgccacaatttgtcttcctctctgggtagtgtctccacagattcattcttt
ggcaacaacagctcacgtatggccaactacattgcccccagccccacactcagctacacc
accaacaacaacggcaacgataataacaacaacaacaatatagatctcaaaactaactgc
aacggattgattgaccaaaatgaggtgtcctcacctgactgcactaatctgagtttcgat
tcctcctctgggtttgacacgtcaaccccaccgggcctcctttggtcccagtacgatagt
ggcatagccccctcctcagccgcctgcagcccacccacctctatttctgtcctattcccc
accaacacctccaccaattccaatggagtagtggtgagtcacagtagggttactggttgc
acctcacagctgggacgattgccctccctccaaggccccagcctggacccgttagcctgg
agggtgcgtagtgatcttggtaggggctccaccagtttctctgcttatcctagcaatatg
gcctccctgccaggctctcaactccccagggttctgtgcgactcatctgcctcgtcgtcc
tcatcttcctccacatcctctggcaccagcagaaaaggcagccgtgactgttcgatgtgc
tttgagagtgaggtcattgcagccctggtcccctgtgggcacaatctcttctgtatggaa
tgtgctaatcgtatctgtgagaggaacaaacctcaatgccctgtctgtcacagccgcgtc
actctggctatgcgtatattttcataa
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