Pungitius pungitius (ninespine stickleback): 119198071
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Entry
119198071 CDS
T07626
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119198071 (lingo4b)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119198071 (lingo4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
ig
Ig_2
V-set
LRRNT
LRR_Zer-1
C2-set_2
Ig_5
Motif
Other DBs
NCBI-GeneID:
119198071
NCBI-ProteinID:
XP_037310812
LinkDB
All DBs
Position
11:17284179..17296372
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AA seq
613 aa
AA seq
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MCVSSQAGGKMFVESLLRWGAWIILFQVASILSAGSCPSRCVCRPETKEVICSGKHLNSV
PEGFSGDARRLDLSHNKIKTVGRRQFSGLLQLQELDLSDNIISMIEVEAFQALQNLRALR
IKNNRLKIIPVGVFSGLSNLRLLDLSQNEILVFLDYTFKELVNLQTLEVEENDLVFISQR
AFFGLQNLQELNLDRSNLTSVPTEALSQLKSLARFRMLRLTISTLPNNAFRRLHRLHSLL
IANWPSLDTVASNSLIGLNLTTLVINSCNLSTVPYSALRHLVYLRYLDLSYNPITVIQGN
LLADLIRLQELHLAGGGLLRIEPGAFRGLAYLRMLNLSSNQLTTLEEGAFHSVGNLQVLR
LDGNPLACDCRLLWVVRRRLRLNFDGHQPTCLSPDAVSRREFRDFSEKELPRLFTCRPAR
VMDRRPQEARVEEGTTVLFSCKADGDPFPSITWISSLKNVVSPTGRIRVLPNGTLEVRFA
QVQDSGTYQCLAGNAAGNDSLTVGLYVKGLPRNRTIPFFSEEGWLEPSNSQGANSSAQMS
KPYPFDAKTLIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMSGAG
EGADGGRFTMKLI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtctcttctcaggctgggggtaagatgtttgtggagtcgctcctccgatggggg
gcctggattatcctgttccaggttgcatcgattttatctgcaggaagctgtccttcgcgc
tgcgtgtgccgtcctgagactaaagaggtgatctgctctggcaaacatttgaactcggtg
ccggagggcttttccggagatgccagacgtttggatttatctcacaataagattaagact
gttgggcgccgccagttctctggcctcttgcaacttcaagagttggatctcagcgataac
ataatctccatgattgaggtggaggctttccaggccctacagaatctgagggcgcttcgg
attaagaataaccgactgaagatcatcccggtcggggtgttttctggactgtcgaatctg
cgtcttctggatttgagccagaatgagatcctggtcttcctggactacaccttcaaagaa
ctggtcaatctgcaaacgctggaagtcgaggagaacgacctggtcttcatatcccagcgc
gctttctttggtctgcagaatctgcaggagctcaacttagaccgcagcaatctgacctcc
gttcctaccgaggcattgtcccagctcaagagtttggcccgttttcgcatgctacgcctc
actatttctacactccctaacaacgctttccggcgactacaccgtctgcacagcctcctg
attgcaaactggccatctttggacactgtggccagcaacagcctgatcggtcttaatttg
accacgcttgtcatcaacagctgcaacctaagtaccgttccttactcagcacttcgtcac
ctggtgtacctgcgctacctggacctgtcctacaaccccatcactgtcatccagggcaat
ctgctcgcggacctcataagactacaggagttacacctagcaggggggggcctgctgaga
atagagccgggtgcctttaggggactggcctaccttcgcatgcttaatttatcctccaat
cagctcactactttggaggagggcgccttccactctgtggggaaccttcaggtgttgcgg
ttggacgggaatcccctagcatgtgactgccggcttctctgggtggtccgccgccggttg
cgcttgaacttcgatggacatcagcccacgtgtttgtctcccgatgcggtgagtcggcga
gaattcagagatttttccgagaaggagctaccccggttgtttacgtgccgcccggcccgt
gtcatggaccgcaggccgcaagaggccagagtagaggagggcactacggttctcttctcc
tgtaaggccgacggggatccgttcccatcaattacctggatctcctctctgaagaatgtg
gttagtccaacaggacgcatccgagttttgcccaatggtaccctagaagtacgattcgcc
caagtgcaggacagtggcacgtatcagtgcctggcgggcaatgcagccggcaacgacagc
ctgaccgtcggcctgtacgtcaaggggctccctcgtaaccgaaccatccccttcttctca
gaggaaggctggctggagccttcaaactcccaaggggccaactcctcagctcaaatgtct
aaaccgtacccgtttgacgcaaagaccctgataatcgccaccaccatgggcttcctgtct
ttcctcagctcagtggccatctgctttgtcttcatgttcttctggagccagagcaaaggt
cagatcaagcacactgcgactattgactttgtccctcggtcttcgatgagtggtgcaggg
gagggagcggatggcggcaggttcaccatgaaacttatttag
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