Pungitius pungitius (ninespine stickleback): 119198108
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Entry
119198108 CDS
T07626
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119198108 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119198108 (slc6a5)
Transporters [BR:
ppug02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
119198108 (slc6a5)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
119198108
NCBI-ProteinID:
XP_037310877
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Position
4:22178994..22192842
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AA seq
784 aa
AA seq
DB search
MDFSDQREMAKQMAGASAPTGYIPTQQPDGAAGFTANRPDTAAACPPAAPRHHPAPQPPP
PCNESKTFSNAENKPGELDSSKAYGTFKSAAPAAPGSAAINSAFRKDSAGSARAGPAQYG
DPLRAAAEQNNAAGNWTAMSQTTIVLGTDGNTSVQPGAVAGDDDDDEEGDENKARGNWSN
KMDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLTMLGIAGIPIFLLEVSLGQFAS
QGPVSVWKCIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCRNEWN
TVECKDKDMLLLDTCILRDRNITSIKNSTFCLSPSNVGNLTKLMNMTIDVNKTYVSPSEE
YFKYNVLHISKGIEYPGDIRWPLAGCLLLAWIIVYCSLAKGIKSSGKVVYFTATFPYVVL
VILLIRGITLPGAFDGILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNK
FHNNCYSDTIIVTCTNSLTSIFAGFVIFSVIGFMAHELKVPIEQVADEGPGIAFVVYPEA
LTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPKYLRKHKPLFTLVCCFCF
FFLGFPMITESGMFMLQLVDTFAASYSLVIIAICELVGISYLYGLQRFCDDIEMMIGFQP
NRFWRICWAFVTPTILTGILGLSLYQWKGMTYEDYTYPNWSMVMGWLMVICSVIWIPIMF
CIKMYLAPGTFGERLKLVCSPQPDWGPFLMKHRGERYKNMTDPLGTNSLGLKLPPKDFQL
GSYQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggatttctctgaccagagagaaatggccaaacagatggccggcgccagcgctccgacc
gggtacatcccgacacagcagcccgatggagccgcgggatttacagcaaacagaccggac
accgcggccgcgtgccccccggccgccccgcgccaccacccggcgccgcagccgcctccc
ccgtgcaacgagagcaaaactttttctaacgcggaaaacaaaccgggagaactggacagc
agcaaagcgtacgggacgtttaaaagcgccgcgccggcggcccccggatccgcggccatc
aactcggccttcaggaaggattccgccggttcggcccgcgcggggcccgcccagtacggc
gacccgctgcgggccgccgcggagcagaacaacgccgcgggcaactggacggccatgagc
cagaccaccatcgtgctggggacagatggcaacacgtctgttcagcccggcgccgtggcg
ggggatgacgatgatgatgaggaaggagatgagaataaggccagaggaaactggtccaat
aagatggattttattctgtccatggttggctacgcggtgggactggggaacgtgtggagg
ttcccttatcttgcttttcaaaacgggggaggagcctttttgatcccttacttgacaatg
ctgggcatcgccggcatcccaatctttttattggaggtgtccctgggccagtttgccagc
cagggccccgtgtcagtgtggaagtgcatcccagctttgcaaggttgcgggattgccatg
ttgataatatctgtcttgatagccatatactataatattataatgtgctggacactgtac
tacctgttcgcttcgttgaagggctcactgccatgggctaactgtaggaatgagtggaac
acggtggaatgtaaggacaaagacatgctgctattagacacgtgcatcctgcgggacaga
aacatcacctccatcaagaactccactttctgtctgtccccgagcaacgtggggaacctg
accaagctgatgaacatgacaatagacgtcaacaagacctacgtcagccccagcgaggag
tacttcaagtacaatgtgttgcacatctccaaaggaatcgaatacccgggagacatccgc
tggcctctggccggctgtctgctcctcgcctggatcatcgtctactgctctctggccaaa
ggcatcaagtcatcggggaaggtggtgtatttcacagccacgttcccctacgtggtgctg
gtcatcctgctcatcagagggataaccctccccggggccttcgacggcatcctctacttc
atcacacccaagtgggagaagctgaacgacgcaaaggtgtggaaagacgcggccactcag
atcttcttctcgctgtcggcggcttggggaggcctcatcactctctcttcctacaataag
ttccacaacaactgctacagtgacaccatcatagtgacgtgtacaaacagtctcaccagt
atatttgctgggtttgtcatcttctccgtcatcggtttcatggcgcacgagttgaaagtg
ccgatagagcaggtggcagatgaaggtccaggcatagcgttcgtggtgtatcctgaggct
ctcaccagacttcccctgtctcctttctgggcgattatcttcttcctcatgctcctgact
cttggcctggataccatgttcgccaccatcgagaccatcgtgacctccgtgtcggacgag
ttccccaaatacctgaggaaacacaaacccctcttcaccctggtctgctgcttctgcttc
ttcttcctgggcttccccatgatcacagagagcggcatgttcatgctgcagctggtggac
actttcgcggcctcctactcgctggtcatcatcgccatctgcgagctggtggggatctcc
tacctctacggtctgcagaggttctgcgacgacattgaaatgatgattggtttccagccg
aaccgattctggagaatctgctgggcctttgtgactcccaccattctgacgggcatcctg
ggactcagcctgtaccagtggaaggggatgacgtacgaggactacacctaccccaactgg
tccatggttatgggctggctcatggtcatctgctccgtcatctggatccccatcatgttc
tgcattaagatgtacctcgcccccggcaccttcggagagcgtctgaagctggtctgctcc
cctcagcccgactggggtccgttcctgatgaagcaccgcggagaacgctacaagaacatg
acggaccccctgggaaccaactcgctgggcctcaaactgccccccaaggacttccagctg
ggctcctaccagtag
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