Pungitius pungitius (ninespine stickleback): 119198111
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Entry
119198111 CDS
T07626
Symbol
thbs3a
Name
(RefSeq) thrombospondin-3a
KO
K04659
thrombospondin 2/3/4/5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04145
Phagocytosis
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04518
Integrin signaling
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119198111 (thbs3a)
04518 Integrin signaling
119198111 (thbs3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
119198111 (thbs3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
119198111 (thbs3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119198111 (thbs3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119198111 (thbs3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119198111 (thbs3a)
00536 Glycosaminoglycan binding proteins [BR:
ppug00536
]
119198111 (thbs3a)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Phagocytosis
Opsonins
119198111 (thbs3a)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119198111 (thbs3a)
Exosomal proteins of colorectal cancer cells
119198111 (thbs3a)
Exosomal proteins of bladder cancer cells
119198111 (thbs3a)
Glycosaminoglycan binding proteins [BR:
ppug00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119198111 (thbs3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
EGF
Motif
Other DBs
NCBI-GeneID:
119198111
NCBI-ProteinID:
XP_037310875
LinkDB
All DBs
Position
11:complement(19236366..19245733)
Genome browser
AA seq
954 aa
AA seq
DB search
MVLRGPVLLSLICIGLTAGVPDGAGVPEVEVVDVLRLQDPKQMAAAVERLSVGLSALTDV
YVASTFRLPAKLGGVLLGVYSKQDNRKYLEVAVMGKINKVVVRYVRADGKLHTVNLHSAH
LSDGRTTSIILRIGGLRRDNMNMELYVNCRLSDSSQGLPSLVDLPREAELVEFRHGQKAY
GRMQGAVESLRLALGGTVAKAGALMDCPFQGDASTYNAVSGDINSILGDHTKALIGQLII
FNQILGELRQDIREQVKEMSLIRNTILECQVCGFHEPRSRCSPDPCYKGVSCMESLNYPG
FTCGPCPPGTTGNGTHCQDVDECELQPCFSPDSCVNTVGGFICHPCPPGLWGAPLSGSGM
DYAKAHRQDCVDIDECLDLPDACVMNSVCINTVGSYKCGGCKPGFLGNQTLGCFPRQSCA
ALTYNPCDSNAHCTMERNGEVACRCNVGWAGNGNTCGPDTDIDGYPDRPLPCIDNHKHCK
QDNCVSTPNSGQEDADNDGIGDQCDEDADGDRIKNVEDNCRLVPNKDQQNSDTDSFGDAC
DNCPSVPNIDQKDTDSNGQGDACDQDIDGDGIPNALDNCPKVPNPMQTDRDRDGVGDACD
SCPELSNPMQTDIDNDLVGDVCDTNQDMDGDGLQDSRDNCPDIPNSSQLDSDNDGLGDDC
DHDDDNDGVLDDYDNCRLIVNPNQKDSDVNGVGDVCENDFDNDAVMDLVDVCPESAEVTL
TDFRAYQTVILDPEGDAQIDPTWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHV
NTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSVPFRATAQPALQLKAVKSRTGPGE
YLRNALWHTGDTSGEVKLLWKDPRNVGWKDKTSYRWHLSHRPQVGYIRVRLFEGTDMVAD
SGVVVDTSMRGGRLGVFCFSQENIIWSNLRYRCNDTVPEDFQTHRKQFMMHIQL
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgcgcggcccggtgctgctgtcactcatctgcattggactcacggcgggagta
ccggacggagcgggagtaccggaggttgaagtggtcgacgtcctgcgcctccaggacccc
aagcagatggcggcagcggtggagaggctgtccgtgggtctgagcgcgctcactgacgtc
tacgtggcgtccaccttccgcctgccggccaagctgggcggagtcctgctgggcgtctac
agcaagcaggacaacaggaagtacctggaggtggccgtcatggggaagatcaataaagtg
gtggtccgttacgtccgagctgatgggaagctccacacggtgaacctccacagcgctcac
ctgtcagacgggaggaccacctccatcatcttgagaatcggaggtcttcggcgtgacaac
atgaacatggaactctacgttaactgccgattgtccgactccagccagggcctcccgtca
ttggtcgacctgcccagggaggcggagctggtggaattcagacacggacagaaggcctat
ggacggatgcagggtgcagttgagtccctcagactggctctaggcggcactgtggctaaa
gctggggctctgatggactgtcccttccaaggagacgcttcaacctacaatgcagtgagt
ggggacataaactccatcctgggtgatcacaccaaggctctgattggtcagctcataatc
ttcaaccagatcctgggagaactaagacaagacatcagagaacaggtgaaggagatgtct
ctgatcagaaacaccatcttggagtgtcaggtctgtggtttccatgagcctcgttctcgc
tgctctcctgacccctgctacaaaggtgtttcctgtatggagagtctcaactatcctggg
ttcacctgtggaccctgcccacctgggaccaccggcaacgggacacactgtcaggatgtg
gacgagtgtgagctccagccttgtttctcccctgactcctgtgtgaacactgtggggggg
ttcatctgtcacccctgtcctcctggactgtggggggcaccgctctctggaagtggaatg
gactatgccaaggcacacagacaggactgtgtggatattgacgagtgtttggatctgcca
gatgcctgtgtgatgaactcagtgtgcatcaacaccgtgggttcatacaagtgtggaggc
tgtaaacccggtttcctgggtaaccagacgctgggatgcttccccaggcagtcgtgtgct
gcgttgacctataacccctgtgacagcaatgcccactgcaccatggagaggaacggagag
gtggcctgtaggtgtaacgtgggctgggccggtaatggtaacacttgtggaccggacaca
gacattgacggttaccccgaccgcccccttccctgcatcgacaaccacaaacactgcaaa
caggacaactgcgtctctacaccaaactccggtcaggaggacgccgacaacgacgggatc
ggagatcagtgtgacgaggacgccgacggggaccgcatcaaaaacgtggaggataactgc
cggctggtcccgaacaaagaccagcagaactctgacactgactccttcggagacgcctgc
gataactgtcccagcgtccccaacatcgaccagaaagacactgacagcaatggacagggg
gacgcctgtgaccaggacatcgacggggacggtattcccaacgctctggataactgtcct
aaggtgcctaacccgatgcagacggaccgggacagggacggcgtgggggacgcatgtgac
agttgtcctgagctcagtaaccccatgcagacggacatcgacaacgacctggtgggagac
gtctgtgacaccaaccaggacatggacggagatggtctccaggacagcagagacaactgc
cccgacatccccaacagctcccagctggactctgacaacgatggcctcggagacgactgc
gaccacgacgacgacaacgacggggtcctcgacgactacgacaactgtcgactcatcgtc
aaccccaaccagaaagactctgacgtgaacggtgtgggggacgtttgtgagaacgacttt
gacaacgatgcggtgatggatttggttgacgtttgtccggagagtgccgaggttactctg
acagacttcagagcctatcagacggtgatcctggacccagagggcgacgcccagatcgac
cccacctgggtggttcttaaccagggcatggagatagtccagaccatgaacagcgaccca
ggcttagctgtcggctacaccgcctttaatggcgtggactttgaaggcacctttcacgtc
aacaccgtcaccgacgacgactacgccggcttcatcttcgggtaccaggactcgtcctcc
ttctacgtggtgatgtggaagcagacggagcagacctactggcagtcggtccccttcagg
gccacggcccagcccgccctgcagctcaaggcggtgaagtccaggaccggacctggggag
tacctgaggaacgcactttggcacaccggagacacctctggagaggtgaagctgctctgg
aaggacccacggaacgtgggctggaaggacaagacctcctaccgctggcacctgagccac
cggccccaggtgggctacatcagggtgcggctgtttgaggggaccgacatggtggcggac
tctggcgtggtggtggacacgtccatgaggggaggccgactcggagtcttctgtttctcc
caggagaacatcatctggtcaaacctgcgctacaggtgtaatgacacagtgccagaagac
ttccagacacatcgtaaacaatttatgatgcacatccagctgtga
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