Pungitius pungitius (ninespine stickleback): 119198133
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Entry
119198133 CDS
T07626
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119198133 (irx2a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119198133 (irx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
119198133
NCBI-ProteinID:
XP_037310920
LinkDB
All DBs
Position
11:complement(844666..849908)
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AA seq
504 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRSDDLARSSSGSAFSPYPGSAAFSASAGA
GFSSPLSYSTDPATGFPSYMSSPYDAQTSGMAGALSYHPYGSPGYPYQLNDPAYRKNATR
DATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR
NKSEDEDEEDGVGERKEVEHSEKNLENSEASAEDEGISLHVDTLTDHSCSAESDGEKVSC
RVGELGSDQAGNKCDEDGDEQNHEPQAQLSPISVTSSPLTGVEAPLLSHHHHHHHQQLHH
LHQLHSQHEDLARSLTNNTIHTNKSSSCLDSRPSPQNPTVKPKLWSLAEIATSDQKQQHQ
QVGPNCPSSSSGLLTPPTSSTTSPAASSPSLYPAPSILGRPIYYTSPFYSNYTNYGNFSP
LHGQGILRYTNSSGVSLAAAAAAAAAAAANEGLSSSRQALEGSAKPKTRPDSPLVKMNPN
QIVVAEQQQQPNFRTASVEAKKGT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcctccgggctcgctggctctttactcctgt
ccggcgtacggagcctcggctctggccgccccgcggagtgacgacctggcgaggtcgtcc
tctggctcagccttcagtccttacccgggatcggctgctttctccgcctcggctggtgcc
ggcttctccagcccgctgtcatactccacggatccagccacggggttcccgtcgtacatg
agctctccatatgacgcgcaaacatcaggcatggcgggggctttgagctaccacccatac
gggagtccagggtacccctaccaactcaacgacccggcgtaccgcaaaaacgccaccagg
gacgccacggccaccctaaaagcctggctgcaggagcacaggaagaacccgtacccgacg
aagggggagaagatcatgctggccatcatcaccaaaatgaccctgacgcaggtctccacg
tggttcgccaacgccaggcgaagactcaagaaggagaacaagatgacatgggcccccagg
aataaaagcgaggacgaggacgaggaggacggggtcggagagaggaaagaagtggagcat
tccgagaaaaacctcgagaacagcgaggcttccgcggaggatgaagggatcagcttgcac
gtcgacaccctgacggaccactcctgctcggccgagtctgacggggagaaggtcagctgt
cgcgtgggcgagctcggctccgaccaggccggcaacaaatgcgacgaggacggcgacgag
cagaaccacgaaccgcaagctcagctctcacccatatccgtcacgtcgtcacctctaacg
ggagtagaagctccacttcttagccatcaccaccaccaccaccaccaacaactccatcat
ctccaccagctccatagccagcacgaggatttggcccggagcctcaccaataacaccatt
cataccaataaatcgtcttcctgccttgatagcagaccttcacctcagaaccctacagtc
aagcccaagttgtggtcgctggcggaaattgctacctcggaccaaaagcagcagcatcag
caagtggggcccaattgcccctcctccagcagtggcctcctcaccccccctacgtcttcc
accacctccccggctgccagttccccctccctctacccggccccgtccatcctcggaaga
cctatttattacacgtctcccttttatagcaattacacaaactatggcaacttcagcccc
ctgcacggccaggggatcctgcggtacactaactcgtcaggagtgagtctggcggccgcc
gccgccgcagcagccgccgccgccgcaaacgagggtctgagctcctcgcgccaggcgctg
gaggggagcgcaaagcccaaaaccaggccggactcccccctcgttaaaatgaacccaaac
cagattgttgttgctgagcagcagcagcagcccaatttcagaaccgcgagtgtagaagca
aagaaaggtacgtaa
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