Pungitius pungitius (ninespine stickleback): 119198151
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Entry
119198151 CDS
T07626
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
ppug03015
mRNA surveillance pathway
ppug03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119198151 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
119198151 (rbm8a)
03015 mRNA surveillance pathway
119198151 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119198151 (rbm8a)
03041 Spliceosome [BR:
ppug03041
]
119198151 (rbm8a)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119198151 (rbm8a)
Spliceosome [BR:
ppug03041
]
Complex C
Other components
EJC/TREX
119198151 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
119198151
NCBI-ProteinID:
XP_037310949
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All DBs
Position
11:complement(17733309..17736494)
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AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRIKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNAQDMMGQPISVDWGFVRGPPKNKRRTGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgttggatcttcatgaagcgggaggcgaggactttcctatggatgaggat
ggtgatgagagcatccacaagttaaaagagaaagccaagaaaaggaaaggacgaggcttc
ggctcagaggaaggagcaagatccagaatcaaggaggactatgatactgtggagcaggac
ggggacgagccgggccctcagagatctgtggagggctggattctgtttgtgactggtgta
cacgaagaagccacagaggaagacatccatgacaagttttcagagtttggggaaatcaag
aacctgcatctcaacctcgaccgcagaacgggctacctcaagggatatgccctggtggag
tatgagacttacaaagaagcccaggcagccatggaagggctcaatgctcaggacatgatg
ggtcagcctatcagtgttgactggggatttgtcagagggccccccaagaacaagaggagg
actggtggtcggagacgcagcagaagcccggacaggaggcggcgttga
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