Pungitius pungitius (ninespine stickleback): 119198227
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Entry
119198227 CDS
T07626
Symbol
si:ch1073-228j22.2
Name
(RefSeq) SPRY domain-containing SOCS box protein 4
KO
K10343
SPRY domain-containing SOCS box protein 1/4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119198227 (si:ch1073-228j22.2)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
119198227 (si:ch1073-228j22.2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPRY
SOCS_box
Motif
Other DBs
NCBI-GeneID:
119198227
NCBI-ProteinID:
XP_037311073
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All DBs
Position
11:complement(12825969..12829301)
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AA seq
330 aa
AA seq
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MEDVTEQPEAEPPQRGDSAKTSRCSLIIPSRSPARVFTSMGVLLSVWLCNREDSSPLSSS
SAFPPLAVPKSSRLAVTLNSFPVAPADGRSHWSPVHRSPHFLLSACKQEATRSPVELSSD
GVRAEMGVKSGLHVWELLWSPNDRGSHAVIGVSRQSCPLQASGYNVLIGRDSQSWGWELK
TNQLWHAGKSPGTYPRTRRRRHSEAVEGFRIRSSTSSHTKVALTTLSIPERILLVLDADA
GTLGFVVDGSFLDVAFKDLPLGVELFPAVSSVRGGAIIRLRYLNGATRDPPALMALCGLS
IRQFLGQKRQTEMDKLPLPPCLQHYLLSTY
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtcaccgagcagcctgaagctgagccgccgcagagaggggactctgcaaaa
acgagccgctgttctctgatcatacctagcaggagccctgcccgtgtgttcacctccatg
ggtgtcttactgtcagtttggctgtgcaacagagaagacagtagccctctctcctcttcg
tcagctttcccccctctggcagtccccaaatcctctcgcctggcagtcactctgaactcc
tttccggtcgctccagcagatggtcgctcacactggagcccggtgcaccgctcacctcac
ttcctgctgtcggcctgcaaacaggaagccacgcggtcacccgttgagctgagcagcgat
ggggtgcgggcagaaatgggggtgaagagcgggcttcatgtgtgggagctgctgtggagc
cccaacgacaggggaagccatgccgtcataggcgtttccaggcagagctgccccttgcag
gcctctgggtacaacgtgcttattggtcgagactcgcagtcctggggctgggaactcaaa
accaatcagctctggcatgccggcaagagtcctggtacttacccaagaacgaggaggaga
cgccactctgaggctgtggagggttttaggatccggtcttccacttcatcccacacaaag
gtggcactgacaactctttctatccctgagcgcatcctgttggtcctggacgccgacgca
gggactctgggatttgttgttgatggcagctttctcgacgtggctttcaaagaccttcct
ctcggagtggagctgttcccagctgtaagcagcgtgagaggaggagccatcataaggtta
cgatacctgaacggcgccacgcgtgacccccctgccttgatggctctgtgtggactgtca
attcgacagtttttagggcaaaagaggcaaactgaaatggacaaactgcctctcccccct
tgtctccagcactacctgctttccacctactaa
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