Pungitius pungitius (ninespine stickleback): 119198282
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Entry
119198282 CDS
T07626
Symbol
shha
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119198282 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119198282 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ppug00536
]
119198282 (shha)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C46: hedgehog family
119198282 (shha)
Glycosaminoglycan binding proteins [BR:
ppug00536
]
Heparan sulfate / Heparin
Morphogens
119198282 (shha)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
119198282
NCBI-ProteinID:
XP_037311145
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Position
19:4482847..4491436
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AA seq
418 aa
AA seq
DB search
MLLWTRIVLVGLVCLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRTSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTTKAVKHLQAGDRVLAGDAGGNPTYTDFIM
FIDQDATTRRLFHVIETDSGQRIALTAAHLLFVGRNATRGGGGGGGRMSAIFASQVRSGQ
EVFVYDAERRRLEPVTVKRIYTREHEGSFAPVTVQGTVVVDQVLASCYAVIEDHDLAHWA
LAPVRLAHWVSSLLFRSQPRAGAQSDGVHWYSKVLYRVGTWLLDSHSIHPLGMSVYSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatcgttttggtcggtctcgtctgcttgtccttggtgtcctct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctctcgcgtacaagcagttcatccccaacgtggcggagaagacgctcggggcaagcggc
agatacgaaggcaagatcacgagaacctccgagcgatttaaagagctgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggtgccgacaggctaatgactcag
agatgtaaagacaagttaaactctctggccatctcggtgatgaaccagtggcccggggtg
aagctgcgggtcaccgagggatgggacgaagacggacaccacttcgaggagtcgctccac
tacgagggccgcgccgtggacatcaccacctcggaccgggacaagagcaagtacggcacc
ctgtcccggctggcggtggaggccgggttcgactgggtctactacgaatccaaagcccac
atccactgctctgtgaaagcagaaaactccgtggcggcgaagtcgggcggctgcttcccg
ggctcgtccacggtcaccctgcaggacggcaccacgaaggcggtcaaacacctccaggcc
ggcgacagggtgctggcgggagacgccggggggaaccccacgtacacggacttcatcatg
ttcatcgaccaagacgccacgaccaggcggctcttccacgtcatcgagaccgactcgggc
cagaggatcgcgctgacggcggcgcacctcctcttcgtcggccgcaacgccacgcggggg
ggcggcggcggcggggggcggatgtcggcgatcttcgccagccaagtgcgatccggccaa
gaggtgttcgtgtacgacgccgagcgccgtcgactcgagcccgtgaccgtgaaacggata
tacacgcgggagcacgagggctccttcgcgccggtgaccgtgcaggggaccgtggtggtg
gaccaggtcctcgcgtcctgttacgcggtgatcgaagaccacgacctggcgcactgggcc
ctggcgcccgtcaggctcgcccactgggtgtcctcgttgcttttcaggtcgcagccccgc
gcgggcgcgcagagcgacggggtgcactggtactccaaggtgctctatcgagtgggaacg
tggctcttggacagccactcgatccacccacttgggatgtcagtgtactcgagttga
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