Pungitius pungitius (ninespine stickleback): 119198330
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Entry
119198330 CDS
T07626
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119198330 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119198330 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119198330 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_G_3
Transcrip_act
Motif
Other DBs
NCBI-GeneID:
119198330
NCBI-ProteinID:
XP_037311244
LinkDB
All DBs
Position
Unknown
AA seq
3076 aa
AA seq
DB search
MKLLLLLLLMERAASQQRGLFPAILNLASNAVISSNATCGDPGPEVYCKLVEHVPGRQIK
NPHCLRCDANSVLSKERHPITNAIDGTNYWWQSPSIKNGHQFHWVTITLDLKQIFQVAYI
IIKAANSPRPGNWILERSLDGVTFDPWQFYALSDSECLSRYNMTPRLGPPTYKSDTEVIC
TSYYSRLNPLEHGEIHTSLINSRPGADDLTSELLNFTSARYIRLRLQRIRTLNADLMMLS
ARDPREVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPLDLDTKKLKCVCEHNTCGESCD
QCCPGYHQQPWQPGTVTKGNTCEKCNCHNKTEDCFYNQTVSDLFLSTNTYGVQKGGGVCL
NCQQNTAGINCETCAAGFYRPSEVSPYSDFPCVRCNCDLRGSESSVCSRDDTHTGVSAGQ
CVCQQGFTGRRCDRCAFGYRDFPQCARCECNLSGSVNTDPCSNCTCKVNVMGAHCDLCKP
GFYNLQESHQLGCTDCFCFGVSDVCESSTWSRAQVFHTNAWLRPSQSLHALPVLDGNDLP
IPNNASGHVHQQVLSWAAPDSFLGNKLLSYRGSLNYSLVYDVPLDNQDHSLPVHSDLIIE
GNGRALRLSPPIVLSLSELAERSVAVTMAEQKFVDVQLGTHVTRDDLLSVMAHVTSLTVR
VHLNASTEGPVRLSSVSLDFADPGSVSGHQAVAVETCECPYGYSGTSCESCLPGFYRVGG
VLFGGNCMQCECNDHAYDCDNDGVCLGCTHNTTGPQCDRCLPGFYGDATEGTPGDCRLCP
CPLTEPSNSFSPTCALDDSGQVSCDQCRDGYTGRTCERCASGFHGNPQALGGTCVRCECN
GNVDLGEAGHCDTVTGECLRCLGNTGGRHCEVCQPGYYGDAMHAKDCRECGCDVNGALSS
VCDVTTGRCICRENVTGLTCDRCQSGYFGLQSAEGCQVCGCNQSGSLSESCDENGRCHCV
EGVSGDTCDRCSHGHYGFHGNGCTACNCEHTGGNCDPEDGACICPPHTEGDTCDRCEAGY
WGHDPITGCKECGCTAAGSSAPQCQLTNGQCLCKEGFSGRSCDRCALGHHGYPACPACGC
DLTGSDEKFCNATLGVCDCQHAGKCVCKVGVSGRRCEECVSGWFALSAQSPDGCSRCFCS
GLSSDCEEQGGLQRVLISTDPSPAPLSLVSQSNLQGVVSGVHQQGGDSLLDTRHLDSSRP
VGPLYWRLPPQYRGQQLLSYGGLLSYVVTFYAEDGSGLSNQEPQVLMRGGTMRKHVIYAD
MVAPSNGIRTQHDIRMMEHKWKYFNSVSEKPVSREDFMSVLSDVEYVIIKASYGTRLQQS
RISNITMETAVEAELDEGSMARLIESCICPPGYTGLSCQDCASGFFRQPLSELSTKKQKS
LFVRPCVRCRCNNHSESCDAETGACLDCQHHTSGRSCSQCAPGHYGNISGSISDCSLCAC
PLPDNSFSPTCVSEGGVGEFRCTACQKGYEGRHCERCSVGYYGNPVEAGGVCAPCGCSGW
GSLRPLCNALSGQCECKAGVKGQSCDQCDERHVLQEGECVSCDDECIGVLLDDLEEVHTH
FLSVNLSAIGMAPYRQLVLLEDRIRDVQVVLSENSSVALRLFTVDDELNHLTSDLDALLQ
QVPRLSHNLEKVAVNSSLSQSALLLQSISSLQHHIQVLQREAGLLNQTGATELDSANQTH
MLEEVESMMETIRAIDLKATNASANQELRLSESLVRSLQDDFLSGRAAVDVRLRLLSAPL
KVAMETLEFAQTQLSNTELQNRLTHTLLETAHPLLHRYKSVHHNLSVEVVSVDGVMEDSQ
LLLDDIILLTQEFTNTSKQVEEFSGQLDQWRPLLRKQVDALVIGLKMTDALEIVYRAEGH
ALLLQSHAHAMHSSMASVGNVSQNGSQLAKLDSDITERVDSAQQVALMAQNSASLALNMT
VQSGLLLSEEGGAKLNASSSALEESRQINKTAEELQLKVSKVNGRLGLVRDSIYNCSLLL
RQPIRDLQRLPNASSATLLQARHQAAAARSGLQEALQRLHRLGLRLQNSSSMVENTKDSV
RETNQMVTHTHTAANEAQRQLEEAEQRTVRLMERIKPLSMLGETLSRNLSDIRELIDQAR
RQAASIKVAVQADRDCVRSYRPQIQSSNFNTLSLTLKTSRQDNLLFYLGSNTTVDFLAVE
MHAGKVSLMWDAGSGRTRLEFPGLDVTNNRWTRINVTRFGARASLSVHQLESAAAPLPAV
TATSPGRSRVLDIDRNTVIHIGGLGSHTQSPAVLRSSTFQGCVGDASLNERNIGLWSYDS
REGECGGCFSSPQAEETSFHFDGSGFSLVQKSLRATSTSIVLLFKTLSPGGLLLYLASNN
TRDFLSMELVEGRVRLTFELGSGVLILTSKKKYNTGVWYKITLQRSKRKGYLSIMAADQS
SDKEVLEAESPGTASDLNRSDLDPIYVGGLPASRPIRRQVVSRSYVGCIKNVEIARSNFD
LLRDAFGVRKGCILEAVRSVSLFSGFVQIAPPSLGQEAELLFSFSTRNQSGVLLAAFSDK
LAQRQHFLSVHLVSGSLEAELGEVGGATRKVTVVKPDGGSFSDRTKHSVIVTIHRKSLSV
QVDEEHLKSVSGSPGELSRLPPASFFIGGLPSGEESRLPIRLQGVSRSFRGCIQDLAVGG
SLVDLSRAVRYEGAELDSCLLEEKGVGPVLPDDQDVDPTSDPSHLPVAPTTHLSAMAPGA
LTCVSEVEPTFLPSAAQFGLSKHSRMTFIIAPHTVKRSVSLRLSVRSRAREGLILLLSDS
KQMDFVVLKLSGGRLMMSADLGKGSASVTSSVAIDDGEWHTVEGEVGRRSVSVSVDGSGP
DRVSLKGNQLDVDARLYLGGLPPAHSTRRINVSSSFPGCVRSASLNGAALNLSEPASRHD
VSSCFTSDQTGSFFNGSGYAALMRDGYKVGSDMWASLEFRTSKPEGVLLGISSAKVDAIG
LEMINGQVVFNVNNGAGRVSVRSVGHKLCDGEWHRLLARKTKHTVSLSVDGQSFTTSNPY
PQSTSAETKNPVYLGGFPVGEKQNCLSISSRFRGCLMNLKLVKSHLSEVLDLSSAHFLSG
VTPNSCPIAKPHPASR
NT seq
9231 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctcctgttgctgctgctgatggagagagctgcatcccagcagagaggtctg
ttcccggccattttgaacctggccagcaacgcagtgatcagcagcaacgccacgtgtggc
gatccaggaccggaggtttactgcaaacttgtggaacatgttccaggacgacagatcaag
aaccctcactgcctgagatgtgacgccaactctgttctgtccaaagaacgtcatccgatc
acaaacgccattgatggcacaaattactggtggcagagtccgagtatcaagaacggtcat
cagtttcactgggtcacgataaccctggacctgaaacagatctttcaggtcgcctacatc
atcatcaaggcagctaactctcctcgaccaggtaactggatcctggaacgctccctggat
ggtgtgaccttcgacccctggcagttttacgccctcagtgactctgagtgtttgtctcgc
tacaacatgacgccgagactcggcccgccgacctacaagagcgacacagaggtcatctgc
acgtcttactactccagactgaacccactggaacacggagagattcacacctccctcatt
aacagccgacctggagcagatgacctgacctctgaactgctgaacttcacgtcagctcgt
tacatcagactaagacttcagcgaatcagaacgctcaacgccgacctgatgatgctgagc
gcccgtgaccccagagaggtcgaccccatcgtcacaaggaggtattattactccatcaaa
gacatctcagtgggggggatgtgcatctgttacggccacgcccagagctgcccgctggac
cttgataccaagaagttgaagtgtgtgtgtgaacacaacacctgtggagagagctgtgac
caatgttgccctggttaccaccagcagccatggcaacctgggaccgtcaccaagggaaac
acctgtgagaagtgtaactgtcacaacaaaacagaggactgtttctacaatcagaccgtc
tcggatctctttttgagtacaaacacttacggtgttcaaaagggaggcggagtctgttta
aactgccaacaaaacaccgccgggatcaactgtgagacctgcgctgccggcttctacaga
ccctccgaggtttctccatattcagacttcccttgtgttcggtgtaactgtgatctgaga
ggatcggagtcttcagtctgcagcagagacgacacccatacaggtgtgtctgcggggcag
tgtgtgtgtcagcagggcttcacgggtcggcggtgtgatcgatgtgcctttggatacaga
gacttccctcagtgtgctcgttgtgagtgcaacctgtccggcagcgtcaacacagacccc
tgcagcaactgtacctgcaaggtgaatgtgatgggggctcactgtgatctgtgtaaacca
ggattctacaacctgcaggagagtcaccagctgggctgcaccgactgtttctgcttcggt
gtgtctgacgtgtgtgagagctctacctggtccagagctcaggtgtttcatacaaacgct
tggctccgcccctctcagtccctccatgccctcccagtcctcgacggaaacgacctcccc
atccccaacaacgcttctggacacgtgcaccaacaggtgctatcttgggcggcgcccgac
agttttctcggaaacaagctgctttcctacagaggttccctcaactactcattggtctat
gatgtcccgttggacaatcaggatcattctctgcctgtccactctgacctcatcatcgag
ggaaacggccgagctcttcgcctctctcctcccattgtcctctccctctcggagctggct
gagcgctctgttgccgtgacgatggccgagcagaagttcgtggacgtccagttgggcact
cacgtcacccgcgacgatctgctctccgtcatggcgcacgtgacgtcactgacggtcagg
gttcacctaaacgcctccaccgaagggcctgtacgtctcagctcagtgtctctggacttt
gctgacccggggtcagtttctggccatcaggcggttgctgtggagacgtgtgaatgtcct
tatggttacagcggtacttcctgtgagtcgtgtctcccggggttctacagagtgggcgga
gtcttgttcggagggaactgcatgcagtgcgagtgtaacgaccacgcgtacgactgtgac
aacgacggagtttgtttggggtgcacccacaacaccacgggcccccagtgtgatcgctgc
ctacccggtttctacggcgatgccacagagggcacgccaggtgactgtcgcctgtgtccg
tgtcctctgaccgagccgtccaacagcttcagccccacatgcgccctggacgactccggc
caggtgtcctgtgaccaatgtcgggacggatacacggggcgcacctgtgagaggtgtgcc
agcggttttcacggtaacccgcaggcgttgggcgggacctgcgtccgctgcgagtgcaat
ggcaacgtggacctcggggaggcggggcactgcgacactgtcaccggggagtgtctgcga
tgtctgggcaacacgggcgggaggcactgcgaggtctgtcagcccggttactatggagac
gccatgcatgcaaaggactgtcgggagtgtggctgtgatgtcaacggcgccctctccagt
gtgtgtgatgtcacaacaggacgttgtatctgtagagaaaacgtgacgggactcacctgt
gaccgctgccagtctgggtactttgggctgcaaagtgcggagggatgtcaggtctgtggt
tgcaaccaatcaggatctctctctgagtcatgtgatgagaatgggcggtgccactgcgtg
gagggtgtgtctggagatacgtgtgaccgctgtagccatggtcactatggtttccacggc
aacggctgcacagcatgcaactgtgaacacactggagggaactgtgaccccgaggacggc
gcgtgcatctgcccaccgcacacagagggagacacctgtgacaggtgtgaggctggttac
tggggtcatgaccccatcacgggctgcaaggagtgcggctgcactgcggctggaagctcc
gcccctcagtgtcagctgaccaatgggcagtgtctgtgcaaagagggcttctctggcaga
tcgtgtgaccgctgcgcccttggtcaccacggttacccagcatgcccagcatgcggctgc
gacctgacaggatcggacgaaaagttctgcaacgccacgctgggagtgtgtgactgtcag
cacgccggaaagtgtgtgtgcaaggtgggcgtgtccgggcgccgctgcgaggagtgcgtc
tccgggtggttcgctctatcggctcagagtcctgacggctgctcgcggtgtttctgctca
ggactcagctccgactgtgaggagcagggaggccttcagcgagtactgatcagcacggat
ccctcccctgctcccctctcattggtcagccagtccaacctgcagggtgtcgtgtctgga
gtccaccaacagggcggcgattcgctgctcgacacccgtcacctggacagcagccggcca
gtcggcccgctgtactggagactgcccccccagtaccgaggccaacagctgctgtcgtac
ggcggtcttctgtcttacgttgtcaccttctacgctgaggacggttcggggctgtccaat
caggagcctcaggtgctgatgaggggcgggaccatgaggaagcatgtgatatatgctgac
atggtcgctcctagcaacggcatcaggacacagcacgacatacggatgatggagcacaag
tggaagtactttaactcggtgtccgagaagccggtgagtcgtgaggacttcatgtcggtc
ctcagtgacgtagagtacgtcatcatcaaagcgtcatatgggacccgactgcagcagagc
aggatctctaacatcaccatggagacggcggtggaggcagagctggatgagggtagcatg
gccagactgattgagtcctgcatttgtccacctggatacaccggactgtcctgtcaggac
tgtgcttccggttttttccgtcagcctctgtctgagttatcaactaagaagcagaagtcg
ctgtttgttcgtccgtgtgttcgatgtcgctgcaacaaccacagtgagagttgtgacgcg
gagactggagcctgtctggattgtcagcatcacaccagtgggcggagctgctcgcagtgt
gccccggggcattatgggaacatcagtggctctataagcgactgctcgctgtgtgcttgc
ccgctaccggacaacagtttcagtcccacctgtgtgtcagagggtggagtcggggaattc
cgctgcaccgcctgtcagaagggatacgaggggagacactgcgagaggtgttcagtgggt
tactacggtaacccggtggaggcgggcggagtctgtgcgccctgcggctgcagtgggtgg
ggctcgctgcgcccgctgtgcaatgcgctgagtgggcagtgcgagtgcaaggctggggtc
aaaggtcagtcgtgtgaccagtgcgacgagagacacgtcctgcaggaaggagagtgtgtg
tcgtgcgatgacgagtgcatcggtgtgctgttggatgaccttgaagaagtacatactcac
ttcctgtctgtcaacctgagcgccattggcatggcgccgtaccgccagctcgtactgctg
gaggaccggatcagagacgtgcaggtggtgctttcagaaaacagctccgttgctctgcgg
ctgttcacagtggacgacgagctcaatcacttgacctccgaccttgacgcgctgctgcag
caggtcccacgtctgtcccacaacctggagaaagtggccgtaaacagcagcctttcccag
agtgcactgctcctgcagagcatcagcagcctgcagcatcacatccaggttcttcagagg
gaggcggggcttctgaaccaaactggagccacggagcttgattcggccaatcagacacat
atgctggaggaggtggagtccatgatggaaaccatccgagccatcgacctgaaggccacc
aacgcctcggccaatcaggagctccgtctctccgagtctctcgtccgatccctgcaggac
gacttcctgtccggcagggcggcagtagacgtcagactccgcctcctctccgcgcccctc
aaggttgctatggaaacactggaatttgctcaaacgcagctgagcaacaccgaactacaa
aaccgactaacacacactcttctggaaaccgcacaccctttgcttcaccgctacaagtcc
gtccatcacaacctcagcgtggaggtggtatctgtggacggagtgatggaggacagtcag
ctgctgctggatgacatcattttgctgacgcaggagttcacaaacaccagcaagcaggtg
gaggagttcagcggtcaactggatcagtggcgccccctgctgaggaaacaggtggacgct
ttggtcatcggactgaagatgaccgacgccctggagattgtataccgagcagaaggccac
gccctcctgctgcagagccacgcccacgccatgcacagctcgatggcgtcggtgggtaac
gtctctcagaatggcagccaattggctaagctggacagtgacatcacagaaagagttgac
tcagcccagcaggttgctttgatggcccagaactccgcctccctggctctcaacatgact
gtccaatcagggctgctgctgtcagaagagggcggagccaagctgaacgccagttcttct
gctttagaagaaagtcgacaaatcaacaagacggctgaagagctgcagctgaaggtttcc
aaagtaaacggccgactgggattggtgagagacagcatttacaactgcagcctcctcctc
cgtcagccaatcagagacctgcagcgcctccctaacgcttcgtccgccacactgcttcag
gctcgccaccaagctgccgctgcgcgctctggcctgcaggaggcgctgcagcggctgcac
agactcgggctgcggctccagaattcttcttctatggtggaaaacaccaaggactctgtg
agggagaccaaccagatggtgactcacacacacaccgcagccaatgaggcgcagcggcag
ctggaggaggcggagcaacgcacggtgcgcctgatggagcggataaagccgctgagcatg
ctgggagaaacgctgagcaggaatctgtccgacatccgagagctgattgatcaggccaga
agacaagcggcctcgatcaaggtggcggtccaggcggacagggactgtgttcgctcctac
agacctcagatccagtcgagtaacttcaacactctgagtctgaccctgaagacctcccgc
caggacaacctgctcttctacctgggcagcaacaccacggtggacttcctggctgtagag
atgcatgctgggaaggtgtctctcatgtgggacgccggctcggggagaacccggctggag
tttcctggactggacgtcaccaacaaccgatggaccagaatcaacgtgacccgcttcggg
gccagagcttctctgtcggttcatcagttggagtctgcggcggctccgttgccggcggtc
acggcgacatcaccgggacggtcccgagttctggacatcgacaggaacacagtgatccac
atcggaggactggggtctcacactcagagcccggcggtgctgcgctcctccaccttccag
ggatgtgtgggcgacgcgtcgctcaacgagaggaacatcggcctgtggagctacgacagc
agggagggggagtgtggaggctgcttcagcagtccccaggcagaggagacctccttccac
tttgatggatctggattctctttggtccagaagtctctgcgggcgacctccacctctatc
gtcctgttgtttaaaaccttgtcgccgggcggattactgctctacctggcctccaacaac
accagagacttcctgtccatggagctggtagaggggcgtgtccgtttgacctttgaacta
ggatcaggtgttctgatcctgacctccaaaaagaagtacaacaccggagtctggtacaag
atcacactacagaggagcaaacgtaaaggttacctgtccatcatggcagccgaccaatca
tcggacaaggaggttttggaggccgagtctcctggaacggcctctgacctgaaccgatcc
gacctggatcccatctacgttggaggacttcctgcctctagaccaatcaggcgacaggtg
gtctccaggtcatacgtaggctgcatcaagaacgtggagattgctcgctccaactttgac
cttctaagagacgctttcggagtcaggaagggctgcatcctcgaggccgtgagaagcgtc
tcactgttcagcggcttcgttcagatcgctcctccatcgctgggtcaggaggcggagctt
ctgttctccttctccacgcgcaaccaatcaggagttctgctggctgccttcagcgacaag
ctagcacagagacagcacttcttgtcggtccacctggtctcaggatctttggaggcggag
ctcggtgaggtgggcggggctactcgtaaggtgacggttgtgaagccggacggagggtcc
ttcagcgaccgaacaaaacactctgtgatcgttaccatccacaggaagtctctatccgtg
caggtggacgaggaacacctgaagtctgtctccgggtcgccgggcgaattgtcacgattg
ccgccggcctctttctttattggtgggctgccgtcgggggaggagtctcgactgccaatc
agattacagggtgtctccaggagtttcagaggctgcatccaagatctggcagtgggcggg
tcgttggttgacctatcgagagctgtgaggtatgagggggcggagcttgacagctgccta
ttggaggagaaaggggtggggcctgtgctgcccgatgaccaagatgtagatcccacttct
gacccctcccacctgccagttgccccgaccacacacttgagcgccatggcaccaggagca
ctgacgtgtgtgtcagaggtggagccgacctttctaccttcggcggctcagtttggtttg
tccaaacacagtcgcatgaccttcatcatcgcacctcacaccgtgaagagaagcgtgtcg
ctgaggttgtcggttcgaagccgagctcgggaggggcttatcctcctcctctccgactcc
aagcagatggacttcgttgtcctcaagctgagcggtggcaggctgatgatgtcggccgac
ctggggaaaggctccgcctctgtcacctcctctgtcgccattgacgatggagaatggcac
actgtggagggggaggtgggccggcggtcggtgtctgtgtcggtggacgggtcgggtcct
gaccgcgtgtccctcaaagggaaccagctggacgtggacgccaggctttacctgggagga
cttccgcccgcacactccaccaggagaattaacgtcagcagcagttttcctggctgcgtc
cgatccgccagtctgaacggcgccgctttgaatctttccgagcccgcctcccggcatgat
gtctcttcctgtttcaccagcgaccagacgggaagcttcttcaatggcagcggatacgcc
gctctcatgcgtgacggctacaaggtcggctctgacatgtgggcgtcgctggagtttcga
accagcaaaccagaaggagtgttgctgggaatcagcagcgcaaaggtggacgccatcgga
ctggaaatgatcaacggacaggtggtgtttaacgtgaacaacggggcgggacgcgtttca
gtgcgttcggttggccacaagttgtgtgacggagagtggcaccgccttttggccagaaag
actaaacacactgtgagtctgagtgtagacgggcagagtttcaccaccagcaacccctac
ccacaatccacctctgccgagaccaagaaccctgtttacctgggaggctttccagtgggg
gagaaacagaattgcctgtcaatcagctcccggttcagaggttgtctgatgaacctgaag
ctcgtcaagtctcacctgagtgaagtgctggacctgagctccgcccacttcctgtcgggc
gtcactcctaactcgtgtcctattgcgaaaccacaccctgcctcgcgttga
DBGET
integrated database retrieval system
