Pungitius pungitius (ninespine stickleback): 119198330
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Entry
119198330 CDS
T07626
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119198330 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119198330 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119198330 (lama1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
EGF_laminin
Laminin_B
EGF_LMN_ATRN
Laminin_II
Laminin_G_3
Transcrip_act
Motif
Other DBs
NCBI-GeneID:
119198330
NCBI-ProteinID:
XP_062415082
LinkDB
All DBs
Position
19:complement(270905..285604)
Genome browser
AA seq
2605 aa
AA seq
DB search
MGAHCDLCKPGFYNLQESHQLGCTDCFCFGVSDVCESSTWSRAQVFHTNAWLRPSQSLHA
LPVLDGNDLPIPNNASGHVHQQVLSWAAPDSFLGNKLLSYRGSLNYSLVYDVPLDNQDHS
LPVHSDLIIEGNGRALRLSPPVVLSLSELAERSVAVTMAEQKFVDVQLGTHVTRDDLLSV
MAHVTSLAVRVHLNASTEGPVRLSSVSLDFADPGSVSGHQAVAVETCECPYGYSGTSCES
CLPGFYRVGGVLFGGNCMQCECNDHAYDCDNDGVCLGCTHNTTGPQCDRCLPGFYGDATE
GTPGDCRLCPCPLTEPSNSFSPTCALDASGQVSCDQCRDGYTGRTCERCASGFHGNPQAL
GGTCVRCECNGNVDLGEAGHCDTVTGECLRCLGNTGGRHCEVCQPGYYGDAVHAKDCREC
GCDVNGALSSVCDVTTGRCICRENVTGLTCDRCQSGYFGLQSAEGCQVCGCNQSGSLSES
CDENGRCHCVEGVSGDTCDRCSHGYYGFHANGCTACNCEHTGGNCDPEDGACICPPHTEG
DTCDRCETGYWGHDPITGCKECGCAAAGSSAPQCQLTNGQCLCKEGFSGRSCDRCALGHH
GYPACPACGCDLTGSNEEFCNATLGVCDCQHAGKCVCKVGVSGRRCEECVSGWFALSAQS
PDGCSRCFCSGLSSDCEEQGGLQRVLISTDPSPAPLSLVSQSNLQGVVSGVHQQGGDSLL
DTRHLDSSRPVGPLYWRLPPQYRGQQLLSYGGLLSYVVTFYAEDGSGLSNQEPQVLIRGG
TMRKHVIYADMVAPSNGIRTQHDIRMMEHKWKYFNSVSEKPVSREDFMSVLSDVEYVIIK
ASYGTRLQQSRISNITMETAVEAELDEGSMARLIESCICPPGYTGLSCQDCASGFFRQPL
SELSTKKQKSLFVRPCVRCRCNNHSESCDVETGACLDCQHHTSGRSCSQCAPGHYGNISG
SISDCSLCACPLPDNSFSPTCVSEGGVGEFRCTACQKGYEGRHCERCSVGYYGNPVEAGG
VCAPCGCSGWGSLRPLCDALSGQCECKAGVKGQSCDQCDERHVLQEGECVSCDDECIGVL
LDDLEEVHTHFLSVNLSAIGMAPYRQLVLLEDRIRDVQVVLSENSSVALRLFTVDDELNH
LTSDLDALLQQVPRLSHNLEKVAVNSSLSQSALLLQSISSLQHHIQVLQREAGLLNQTGA
TELDSANQTHMLEEVESMMETIRAIDLKATNASANQELRLSESLVRSLQDDFLSGRAAVD
VRLRLFSAPLKVAMETLEFAQTQLSNTELQNRLTHTLLETAHPLLHRYKSVHHNLSVEVV
SVDGVMEDSQLLLDDIILLTQEFTNTSKVEEFSGQLDQWRPLLRKQVDALVIGLKMTDAL
EIVYRAEGHALLLQSHAHAMHSSMASVGNVSPNGSQLAKLDSDITERVDSAQQVALMAQN
SASLALNMTVHSGLLLSEEGGAKLNASSSALEESRQINKTAEELQLKVSKVNGRLGLVRD
SIYNCSLLLRQPIRDLQRLPNASSASLLQARHQAAAARSGLQEALQRLHRLGLRLQNSSS
MVENTKDSVRETNQMVTHTHTAANEAQRQLEEAEQRTVRLMERIKPLSMLGETLSRNLSD
IRELIDQARRQAASIKVAVQADRDCVRSYRPQIQSSNFNTLSLTLKTSRQDNLLFYLGSN
TTVDFLAVEMHAGKVSLMWDAGSGRTRLEFPGLDVTNNRWTRINVTRFGARASLSVHQLE
SAAAPLPAVTATSPGRSRVLDIDRNTVIHIGGLGSHTQSPAVLRSSTFQGCVGDASLNER
NIGLWSYDSREGECGGCFSSPQAEETSFHFDGSGFSLVQKSLRATSTSIVLLFKTLSPGG
LLLYLASNNTRDFLSMELVEGRVRLTFELGSGVLILTSKKKYNTGVWYKITLQRSKRKGY
LSIMAADQSSDKEVLEAESPGTASDLNRSDLDPIYVGGLPASRPIRRQVVSRSYVGCIKN
VEIARSNFDLLRDAFGVRKGCILEAVRSVSLFSGFVQIAPPSLGQEAELLFSFSTRNQSG
VLLAAFSDKLAQRQHFLSVHLVSGSLEAELGEVGGATRKVTVVKPDGGSFSDRTKHSVIV
TIHRKSLSVQVDEEHLKSVSGSPGELSRLPPASFFIGGLPSGEESRLPIRLQGVSRSFRG
CIQDLAVGGSLVDLSRAVRYEGAELDSCLLEEKGVGPVLPDDQDVDPTSDPSHLPVAPTT
HLSAMAPGALTCVSEVEPTFLPSAAQFGLSKHSRMTFIIAPHTVKRSVSLRLSVRSRARE
GLILLLSDSKQMDFVVLKLSGGRLMMSADLGKGSASVTSSVAIDDGEWHTVEGEVGRRSV
SVSVDGSGPDRVSLKGNQLDVDARLYLGGLPPAHSTRRINVSSSFPGCVRSASLNGAALN
LSEPASRHDVSSCFTSDQTGSFFNGSGYAALMRDGYKVGSDMWASLEFRTSKPEGVLLGI
SSAKVDAIGLEMINGQVVFNVNNGAGRVSVRSVGHKLCDGEWHRLLARKTKHTVSLSVDG
QSFTTSNPYPQSTSAETKNPVYLGGFPVGEKQNCLSISSRFRGCLMNLKLVKSHLSEVLD
LSSAHFLSGVTPNSCPIAKPHPASR
NT seq
7818 nt
NT seq
+upstream
nt +downstream
nt
atgggggctcactgtgatctgtgtaaaccaggattctacaacctgcaggagagtcaccag
ctgggctgcaccgactgtttctgcttcggtgtgtctgacgtgtgtgagagctctacctgg
tccagagctcaggtgtttcatacaaacgcttggctccgcccctctcagtccctccatgcc
ctcccagtcctcgacggaaacgacctccccatccccaacaacgcttctggacacgtgcac
caacaggtgctatcttgggcggcgcccgacagttttctcggaaacaagctgctttcctac
agaggttccctcaactactcattggtctatgatgtcccgttggacaatcaggatcattct
ctgcctgtccactctgacctcatcatcgagggaaacggccgagctcttcgcctctctcct
cccgttgtcctctccctctcggagctggctgagcgctctgttgccgtgacgatggccgag
cagaagttcgtggacgtccagttgggcactcacgtcacccgcgacgatctgctctccgtc
atggcgcacgtgacgtcactggcggtcagggttcacctaaacgcctccaccgaagggcct
gtacgtctcagctcagtgtctctggactttgctgacccggggtcagtttctggccatcag
gcggttgctgtggagacgtgtgaatgtccttatggttacagcggtacttcctgtgagtcg
tgtctcccggggttctacagagtgggcggagtcttgttcggagggaactgcatgcagtgc
gagtgtaacgaccacgcgtacgactgtgacaacgacggagtttgtttggggtgcacccac
aacaccacgggcccccagtgtgatcgctgcctacccggtttctacggcgatgccacagag
ggcacgccaggtgactgtcgcctgtgtccgtgtcctctgaccgagccgtccaacagcttc
agccccacatgcgccctggacgcctccggccaggtgtcctgtgaccaatgtcgggacgga
tacacggggcgcacctgtgagaggtgtgccagcggttttcacggtaacccgcaggcgttg
ggcgggacctgcgtccgctgcgagtgcaatggcaacgtggacctcggggaggcggggcac
tgcgacactgtcaccggggagtgtctgcgatgtctgggcaacacgggcgggaggcactgc
gaggtctgtcagcccggttactatggagacgccgtgcatgcaaaggactgtcgggagtgt
ggctgtgatgtcaacggcgccctctccagtgtgtgtgatgtcacaacaggacgttgtatc
tgtagagaaaacgtgacgggactcacctgtgaccgctgccagtctgggtactttgggctg
caaagtgcggagggatgtcaggtctgtggttgcaaccaatcaggatctctctctgagtca
tgtgatgagaatgggcggtgccactgcgtggagggtgtgtctggagatacgtgtgaccgc
tgtagccatggttactatggtttccacgccaacggctgcacagcatgcaactgtgaacac
actggagggaactgtgaccccgaggacggcgcgtgcatctgcccaccgcacacagaggga
gacacctgtgacaggtgtgagactggttactggggtcatgaccccatcacgggctgcaag
gagtgcggctgcgctgcggctggaagctccgcccctcagtgtcagctgaccaatgggcag
tgtctgtgcaaagagggcttctctggcagatcgtgtgaccgctgcgcccttggtcaccac
ggttacccagcatgcccagcatgcggctgcgacctgacaggatcgaacgaagagttctgc
aacgccacgctgggagtgtgtgactgtcagcacgccggaaagtgtgtgtgcaaggtgggc
gtgtccgggcgccgctgcgaggagtgcgtctccgggtggttcgctctatcggctcagagt
cctgacggctgctcgcggtgtttctgctcagggctcagctccgactgtgaggagcaggga
ggccttcagcgagtactgatcagcacggatccctcccctgctcccctctcattggtcagc
cagtccaacctgcagggtgtcgtgtctggagtccaccaacagggcggcgattcgctgctc
gacacccgtcacctggacagcagccggccagtcggcccgctgtactggagactgcccccc
cagtaccgaggccaacagctgctgtcgtacggcggtctgctgtcttacgttgtcaccttc
tacgctgaggacggttcggggctgtccaatcaggagcctcaggtgctgattaggggcggg
accatgaggaagcatgtgatatatgctgacatggtcgctcctagcaacggcatcaggaca
cagcacgacatacggatgatggagcacaagtggaagtactttaactcggtgtccgagaag
ccggtgagtcgtgaggacttcatgtcggtcctcagtgacgtagagtacgtcatcatcaaa
gcgtcatatgggacccgactgcagcagagcaggatctctaacatcaccatggagacggcg
gtggaggcagagctggatgagggtagcatggccagactgattgagtcctgcatttgtcca
cctggatacaccggactgtcctgtcaggactgtgcttccggttttttccgtcagcctctg
tctgagttatcaactaagaagcagaagtcgctgtttgttcgtccgtgtgttcgatgtcgc
tgcaacaaccacagtgagagttgtgacgtggagactggagcctgtctggattgtcagcat
cacaccagtgggcggagctgctcgcagtgtgccccggggcattatgggaacatcagtggc
tctataagcgactgctcgctgtgtgcttgcccgctaccggacaacagtttcagtcccacc
tgtgtgtcagagggtggagtcggggaattccgctgcaccgcctgtcagaagggatacgag
gggagacactgcgagaggtgttcagtgggttactacggtaacccggtggaggcgggcgga
gtctgtgcgccctgcggctgcagtgggtggggctcgctgcgcccgctgtgcgatgcgctg
agtgggcagtgcgagtgcaaggctggggtcaaaggtcagtcgtgtgaccagtgcgacgag
agacacgtcctgcaggaaggagagtgtgtgtcgtgcgatgacgagtgcatcggtgtgctg
ttggacgaccttgaagaagtacatactcacttcctgtctgtcaacctgagcgccattggc
atggcgccgtaccgccagctcgtactgctggaggaccggatcagagacgtgcaggtggtg
ctttcagaaaacagctccgttgctctgcggctgttcacagtggacgacgagctcaatcac
ttgacctccgaccttgacgcgctgctgcagcaggtcccacgtctgtcccacaacctggag
aaagtggccgtaaacagcagcctttcccagagtgcactgctcctgcagagcatcagcagc
ctgcagcatcacatccaggttcttcagagggaggcggggcttctgaaccaaactggagcc
acggagcttgattcggccaatcagacacatatgctggaggaggtggagtccatgatggaa
accatccgagccatcgacctgaaggccaccaacgcctcggccaatcaggagctccgtctc
tccgagtctctcgtccgatcgctgcaggacgacttcctgtccggcagggcggcagtagac
gtcagactccgcctcttctccgcgcccctcaaggttgctatggaaacactggaatttgct
caaacgcagctgagcaacaccgaactacaaaaccgactgacacacactcttctggaaacc
gcacaccctttgcttcaccgttacaagtccgtccatcacaacctcagcgtggaggtggtg
tctgtggacggagtgatggaggacagtcagctgctgctggatgacatcattttgctgacg
caggagttcacaaacaccagcaaggtggaggagttcagcggtcaactggatcagtggcgc
cccctgctgaggaaacaggtggacgctttggtcatcggactgaagatgaccgacgccctg
gagattgtataccgagcagaaggccacgccctcctgctgcagagccacgcccacgccatg
cacagctcgatggcgtcggtgggtaacgtctctccgaatggcagccaattggctaagctg
gacagtgacatcacagaaagagttgactcagcccagcaggttgctttgatggcccagaac
tccgcctccctggctctcaacatgactgtccattcagggctgctgctgtcagaagagggc
ggagccaagctgaacgccagttcttctgctttagaagaaagtcgacaaatcaacaagacg
gctgaagagctgcagctgaaggtttccaaagtaaacggccgactgggattggtgagagac
agcatttacaactgcagcctcctcctccgtcagccaatcagagacctgcagcgcctccct
aacgcttcgtccgcctcactgcttcaggctcgccaccaagctgccgctgcgcgctctggc
ctgcaggaggcgctgcagcggctgcacagactcgggctgcggctccagaattcttcttct
atggtggaaaacaccaaggactctgtgagggagaccaaccagatggtgactcacacacac
accgcagccaatgaggcgcagcggcagctagaggaggcggagcaacgcacggtgcgcctg
atggagcggataaagccgctgagcatgctgggagaaacgctgagcaggaatctgtccgac
atccgagagctgattgatcaggccagaagacaagcggcctcgatcaaggtggcggtccag
gcggacagggactgtgttcgctcctacagacctcagatccagtcgagtaacttcaacact
ctgagtctgaccctgaagacctcccgccaggacaacctgctcttctacctgggcagcaac
accacggtggacttcctggctgtagagatgcatgctgggaaggtgtctctcatgtgggac
gccggctcggggagaacccggctggagtttcctggactggacgtcaccaacaaccgatgg
accagaatcaacgtgacccgcttcggggccagagcttctctgtcggttcatcagttggag
tctgcggcggctccgttgccggcggtcacggcgacatcaccgggacggtcccgagttctg
gacatcgacaggaacacagtgatccacatcggaggactggggtctcacactcagagcccg
gcggtgctgcgctcctccaccttccagggatgtgtgggcgacgcgtcgctcaacgagagg
aacatcggcctgtggagctacgacagcagggagggggagtgtggaggctgcttcagcagt
ccccaggcagaggagacctccttccactttgatggatctggattctctttggtccagaag
tctctgcgggcgacctccacctctatcgtcctgttgtttaaaaccttgtcgccgggcgga
ttactgctctacctggcctccaacaacaccagagacttcctgtccatggagctggtagag
gggcgtgtccgtttgacctttgaactaggatcaggtgttctgatcctgacctccaaaaag
aagtacaacaccggagtctggtacaagatcacactacagaggagcaaacgtaaaggttac
ctgtccatcatggcagccgaccaatcatcggacaaggaggttttggaggccgagtctcct
ggaacagcctctgacctgaaccgatccgacctggatcccatctacgttggaggacttcct
gcctctagaccaatcaggcgacaggtggtctccaggtcatacgtaggctgcatcaagaac
gtggagattgctcgctccaactttgaccttctgagagacgctttcggagtcaggaagggc
tgcatcctcgaggccgtgagaagcgtctcactgttcagcggcttcgttcagatcgctcct
ccatcgctgggtcaggaggcggagcttctgttctccttctccacgcgcaaccaatcagga
gttctgctggctgccttcagcgacaagctagcacagagacagcacttcttgtcggtccac
ctggtctcaggatctttggaggcggagctcggtgaggtgggcggggctactcgtaaggtg
acggttgtgaaaccggacggagggtccttcagcgaccgaacaaaacactctgtgatcgtt
accatccacaggaagtctctatccgtgcaggtggacgaggaacacctgaagtctgtctcc
gggtcgccgggcgaattgtcacgattgccgccggcctctttctttattggtgggctgccg
tcgggggaggagtctcgactgccaatcagattgcagggtgtctccaggagtttcagaggc
tgcatccaagatctggcagtgggcgggtcgttggttgacctatcgagagctgtgaggtat
gagggggcagagcttgacagctgcctattggaggagaaaggggtggggcctgtgctgccc
gatgaccaagatgtagatcccacttctgacccctcccacctgccagttgccccgaccaca
cacttgagcgccatggcaccaggagcactgacgtgtgtgtcagaggtggagccgaccttt
ctaccttcggcggctcagtttggtttgtccaaacacagtcgcatgaccttcatcatcgca
cctcacaccgtgaagagaagcgtgtcgctgaggttgtcggttcgaagccgagctcgggag
gggcttatcctcctcctctccgactccaagcagatggacttcgttgtcctcaagctgagc
ggtggcaggctgatgatgtcggccgacctggggaaaggctccgcctctgtcacctcctct
gtcgccattgacgatggagaatggcatactgtggagggggaggtgggccggcggtcggtg
tctgtgtcggtggacgggtcgggtcctgaccgcgtgtccctcaaagggaaccagctggac
gtggacgccaggctttacctgggaggacttccgcccgcacactccaccaggagaattaac
gtcagcagcagttttcctggctgcgtccgatccgccagtctgaacggcgccgctttgaat
ctttccgagcccgcctcccggcatgatgtctcttcctgtttcaccagcgaccagacggga
agcttcttcaatggcagcggatacgccgctctcatgcgtgacggctacaaggtcggctct
gacatgtgggcgtcgctggagtttcgaaccagcaaaccagaaggagtgttgctgggaatc
agcagcgcaaaggtggacgccatcggactggaaatgatcaacggacaggtggtgtttaac
gtgaacaacggggcgggacgcgtttcagtgcgttcggttggccacaagttgtgtgacgga
gagtggcaccgccttttggccagaaagactaaacacactgtgagtctgagtgtagacggg
cagagtttcaccaccagcaacccctacccacaatccacctctgccgagaccaagaaccct
gtttacctgggaggctttccagtgggggagaaacagaattgcctgtcaatcagctcccgg
ttcagaggttgtctgatgaacctgaagctcgtcaagtctcacctgagtgaagtgctggac
ctgagctccgcccacttcctgtcgggcgtcactcctaactcgtgtcctattgcgaaacca
caccctgcctcgcgttga
DBGET
integrated database retrieval system
