Pungitius pungitius (ninespine stickleback): 119198346
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Entry
119198346 CDS
T07626
Symbol
cul4a
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03420
Nucleotide excision repair
ppug04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119198346 (cul4a)
09124 Replication and repair
03420 Nucleotide excision repair
119198346 (cul4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119198346 (cul4a)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119198346 (cul4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119198346 (cul4a)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
119198346 (cul4a)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
119198346 (cul4a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
119198346 (cul4a)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119198346 (cul4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
KCTD4_C
Motif
Other DBs
NCBI-GeneID:
119198346
NCBI-ProteinID:
XP_062417706
LinkDB
All DBs
Position
4:complement(10110135..10118172)
Genome browser
AA seq
757 aa
AA seq
DB search
MAEDTRQDKRASFSAITEHNTNGMARTSAVASSKSGASKKLVIKNFKDRPKLAENYTEDT
WLKLRDAVSAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIKQFR
EESLDNLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHI
VSDTAVQKRTVDGILEQIELERNGETVDRSLIRSLLGMLSDLQVYKESFEERFLIETNRL
YAAEGQRLTQERDVPEYLHHVAHRLEEENDRIMSYLDQSTQKPLINCVEKQLLGEHITAM
LQKGLRTLLDENRVTELGLLYQLFSKVKGGLPTLLQFWRDYIKSFGGEIVCTPEKDKDMV
QDLLDFKDKMDNVAQMCFTRSEGFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNK
EATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDIMIQFKQYIQNQSGPSNIELTVNILTMGYWPSYIPMEVH
LPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKAEFKEGKKELQVSLFQTLVLLMF
NEGEEFSMDEIRAATGIEEEELRRTLQSLACGKARVLNKNPRGKDVEDGDRFNFNNDFKH
KLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQ
LKFPVKPGDLKKRIESLIDRDYMERDKETPNQYHYVA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacacccgacaggacaagagagccagcttctccgctataacggagcacaac
accaacgggatggccaggacctccgccgtggcctcaagcaaaagtggcgcttcaaagaaa
ttagtgatcaaaaatttcaaagacaggccaaaattagccgagaactataccgaggacaca
tggctgaagctacgagatgcagtcagtgccatccagaacagcacctccatcaagtacaat
ctggaggagctctatcaggcggtagaaaacctctgttcgtataaagtctcccccacgcta
tacaagcagctacggcaggtctgtgaagatcatgtgcaggcccagatcaaacagttcaga
gaagagtctttggacaatctttccttcctcaagcgaatgaatcgctgctggcaggatcac
tgcaggcaaacgataatgatccgaagtatctttctcttcctggatcgtacctatgtgctt
cagaactccctcctcccgtccatctgggacactggattggaattgtttcgtacccacatt
gtgagtgacactgcggttcagaagcgcacagtggatggcatcttggagcagattgaactc
gagcgaaatggagagacagtagaccgtagtctgatcagaagccttctgggcatgctgtca
gacctgcaggtgtacaaagagtcttttgaagagagatttctgattgagaccaatcgcctg
tatgcagcagagggacagcgactgacgcaagagagagatgtgcctgagtacctgcaccat
gtggctcatcggctagaagaggagaatgatcgcatcatgagctacctcgaccagagcact
cagaaaccccttatcaactgtgtggagaaacagcttttaggagaacacattactgctatg
ctacaaaaaggtctgaggaccctgctggatgagaatcgagtgactgagcttggcctcctc
taccagctcttcagcaaggtgaagggaggactccccactctgctgcagttctggagagat
tacattaagtccttcggtggggagatcgtatgcactccagagaaagacaaggacatggtg
caggacctgctggactttaaggacaagatggacaacgtggcacagatgtgcttcacgcgg
agtgaagggttcatcaatgccatgaaagaggcctttgagacctttatcaacaagaggccc
aacaaaccggctgaactcatcgctaaatatgtggattcaaagttaagagcagggaacaaa
gaggccacggaggaggagctggagagaatcctggacaagataatgatcatcttccgcttc
atacacgggaaagatgtgtttgaagctttttataagaaggacttggccaagcgtctgctg
gtcggtaagagcgcgtctgttgacgctgaaaagtcgatgctctccaagctcaaacatgaa
tgcggagcagcatttaccagtaaactagaggggatgtttaaggacatggaactatccaaa
gatatcatgatccagttcaaacagtatatccagaaccagagcgggccaagcaacatagaa
cttactgtcaacatcctcaccatgggctactggccttcgtacatacccatggaggtccac
ttgcccccagagatggtaaaactccaggaggtcttcaagctgttctacttggggaagcac
agtgggaggaagctgcagtggcaacccaccctgggccatgctgtgctaaaggcagagttc
aaagagggcaagaaggagctgcaggtctctctgttccagacgcttgtgctgctgatgttc
aatgagggagaagaattcagcatggatgagattcgcgctgccactggcatagaggaggaa
gagctcaggcgcacgctgcagtcgctggcctgcggaaaagcacgcgtcctcaacaagaat
cctcggggaaaagacgtggaagacggagaccgtttcaatttcaacaatgattttaaacac
aaactgttccgtataaagatcaaccagatccagatgaaggaaacggtagaggaacaggta
agcaccacagagcgtgtgtttcaagacaggcagtaccagatcgatgccgctgtggtgcgc
atcatgaagatgaggaagaccctcagtcacaaccttctggtatcagagctctacaaccag
ctaaagttccctgtaaagccgggtgatctgaagaagcggatcgagtcgctcatagacaga
gactacatggaacgtgacaaggagactcccaaccagtaccactatgttgcctga
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integrated database retrieval system
