Pungitius pungitius (ninespine stickleback): 119198423
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Entry
119198423 CDS
T07626
Symbol
dync2i1
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppug03037
]
119198423 (dync2i1)
Cilium and associated proteins [BR:
ppug03037
]
Primary cilia and associated proteins
Dynein and associated proteins
119198423 (dync2i1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_RFWD3
Beta-prop_IFT140_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
119198423
NCBI-ProteinID:
XP_037311478
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All DBs
Position
19:complement(4213762..4221640)
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AA seq
1060 aa
AA seq
DB search
MSLFCAFERLQKIKTRMRTCTAKSEHRKSFIQKLTKEDTWRPADLTRHIREGDDFDRRRD
DNERRHRGGESVERRRRDPEKVSRQERDKPREISREKRHEDEKYRYPDRRKEGSRDRRGD
KDQERQDDKEKKRERDKLVAGKRNEDDYKRRDRADKQEKEKDRERDRDKEKDRARDKERH
NEGHRDKRGEEREKERRSEEQDKEHRRGERVRMEKPEREKRDRHLGRERPKDEYRDQRKD
KERRERHGDKKDVEVKDERERIEEKRRHKEERERRHREREHKDEKRKHDSESRENRDLKG
TGEEVRRHRGDRERAERDKHKERRKREEDEEEEPRRNLLTDGASSKKPASDKSPKQDTKT
EVATDEVSADQEYEDDFEEYEEDFEEMDDSASEREDEGEQRHPEEGEEREELSAQRRKEI
EAIQRAMDEENERVGTAQSRQTVSAEEEETPKWSREKNLKKEGGSQRGKFIDFVAAKQRE
VSKQVSTKQKKRSAELLRLIDLDFSMTVSLLDLPAVNEYDMYIRTFGTANTKQAYVQCNE
DNADRDIQTEEIEVCEKWTQHPPEHKGACGDPNLSHEARNHGEMSFDSQRLTAFLRSASQ
VMVILLEEDRAERKSLRKLSSQTDTPSFSDGSLQLNTNLSFLYGRRISLVHFSPVQRHTV
MSVHSATTKPSALRLDSCTVICIWNIWEPSRPQKVLVYESEVQCCCFSPGKAILVFAGTS
VGSVAVWDLREHAGGHHRLTIGEEEWAFRQPTFSTDALMAGSAHISSVTSVEVVPSTAPG
GLRPEAPLLASEDESSGLSFQLASLDEMGVLNFWVVVELPKANEAGSPTDLGLRPGGKVK
LLHSSRLLTADRVSPRDAAETGPLQTLLLRFLPTDSNHFFIGTNMGLVNHETSHGLKAPP
KLYRCQEAGVRPINVTSMHFSPFRQQLFLVGCGDGSIRLHQVSSEHPVAEWKNGTAGEPV
VSLRWTRTRPAVFCVLDAASTLHVWDLLKNDAEPVVTERMDSDRVTAMTVFGDSGQQNMY
SGIALAHESGKIEMQYFSRHFTVPIKAEEEKLESMMAEAF
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttttgtgcgtttgaaagactccagaaaataaaaacccgaatgagaacatgc
acagcgaaaagtgaacaccgaaaatcatttattcagaaactaacgaaggaagacacatgg
agaccagctgacctgacaagacacatcagggagggcgatgactttgacaggaggcgagat
gacaacgagagaaggcatcgtggtggggaatccgtagagagacgacgcagggacccagag
aaggtgtccagacaagagagggacaaacccagggagatatcaagggagaaaagacatgaa
gacgaaaaatacagatatccagatcggcgcaaggagggctcacgggataggagaggtgat
aaggaccaggagagacaggatgacaaggagaagaaaagggaaagagacaagttggtagct
gggaagaggaacgaagatgattacaagaggcgtgatagagcagacaagcaggaaaaagag
aaggacagggaaagggacagagataaggagaaagacagggcaagggataaagagagacac
aatgaggggcacagggacaagagaggggaagagagagaaaaggagagacggagtgaagag
caggacaaagagcacaggagaggagaacgggttcggatggaaaagccagagagagaaaag
cgagatcggcatctagggagagagcgacccaaagacgaatatagagaccagaggaaagac
aaagaaagacgagagagacatggagacaaaaaggacgtggaagtgaaggacgaaagggag
cgcatagaagaaaagagaagacacaaagaggagcgagaaagaagacacagagagagagaa
cataaagatgaaaagcgaaagcatgacagtgagtccagggagaatcgagacttgaagggt
acaggtgaagaggtcaggcgtcaccgcggtgacagagagcgagcagagcgggacaaacac
aaggagagaaggaaaagagaggaagacgaagaggaggaaccgaggagaaatcttctcaca
gacggggccagctccaagaaaccagcatctgacaagagtcctaagcaggacacaaaaaca
gaggttgccacggatgaagtttcggctgaccaggaatatgaagatgactttgaggaatat
gaggaggacttcgaggagatggatgacagcgcgagcgaacgtgaggacgagggggagcaa
cggcatccggaggagggggaagagagggaggagctttcagcacaaaggagaaaggaaatt
gaagcgattcagcgagccatggacgaagagaacgagagagttggaacagctcagtccaga
caaactgtgagcgcagaggaggaagagacccctaagtggtccagagaaaagaacctgaag
aaggagggcggatcccaacgtggaaagtttatcgactttgtagccgcaaagcagcgtgaa
gtcagcaagcaggtttccactaaacagaagaaacgcagtgcagagctcctccgcttaatt
gatctggacttctcgatgacggtctctctattggatctgcccgcagtgaatgaatatgac
atgtatatccgaacctttggaacggcaaacaccaagcaggcttacgttcagtgcaacgag
gataacgctgacagagacatccagacggaggagatcgaggtgtgtgagaagtggacgcag
catcctccagagcacaagggagcctgtggagatccaaacctctcccatgaagcccgtaac
catggtgaaatgagctttgattcgcagcgtctgacagcgtttctgcgctccgcctctcag
gtcatggtcatcctgttggaagaggatcgagctgagagaaaatccctgaggaagttgagc
tctcaaacagacacgccgtctttcagcgatgggagtttacagctcaacactaatttgtcc
tttctttacggtcggcgcatcagcctggtgcacttctctccggtccagaggcacaccgtg
atgtccgtccacagcgcgaccacgaagcccagcgcgctgcgtctcgacagctgcaccgtc
atctgcatctggaacatctgggagccgtccagacctcaaaaggtcctcgtctacgaatcc
gaggtgcagtgttgttgcttcagccctggaaaggccatcttggtgtttgcaggcacgtct
gttggctccgtggcggtgtgggacctcagggagcacgccggtggccatcaccggctgacg
atcggggaagaggaatgggctttccggcagcccaccttctccactgacgcactgatggcc
ggctcggctcatatctcgtcggtgacatctgtcgaagtcgtcccctccactgcaccgggg
gggctgaggccagaggccccccttttggcatccgaagacgagtcgtcagggttgtcattc
cagctggcttctctggatgaaatgggggttctgaatttctgggtggtagtggaactccca
aaagccaacgaggccggctccccaactgatctaggactcaggcctggcgggaaagtaaag
ttacttcacagctcccgcctcctcaccgctgacagggtatcgccacgagatgcggcagaa
acagggccgttacagacgcttctcttaaggttcctccccacggactccaatcatttcttt
atcggcaccaatatgggtctggtcaatcatgaaaccagtcacggtttaaaagccccacca
aagctttacaggtgccaggaggctggagtccgacctattaatgtcacctccatgcacttt
tctccattcaggcaacaattgttcttggtgggttgtggagacggcagcatcaggctgcat
caggtcagcagtgagcatcccgtggcagagtggaaaaacggtacagctggagaaccggtg
gtctcgctgcgctggacccggaccagacctgcagtcttctgcgtgctggacgcagcctcg
accctccacgtatgggacctgctgaaaaacgacgcagagcccgtggtcaccgaaaggatg
gactcggacagggtgacggccatgactgtgtttggagactcgggacaacagaacatgtat
tcaggaatagcactcgcacacgagtcaggaaagatagaaatgcagtatttctcaagacat
tttacggtgcccattaaagcagaagaggagaagttggagagtatgatggctgaagccttc
tga
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