Pungitius pungitius (ninespine stickleback): 119198433
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Entry
119198433 CDS
T07626
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119198433 (irx3a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119198433 (irx3a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
119198433
NCBI-ProteinID:
XP_037311503
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All DBs
Position
4:19576160..19580026
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AA seq
440 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERQGIASNARAGTELSPSGALSNVLSTMYGSPFAAAAQGYGAF
LPYSNDISIFNQLGAQYELKDSPGVQGHPGFAHHHPAFYPYGQYQFGDPSRPKNATREST
STLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNRT
DEEGNVYGSDHEGEEGDKREDEEEIDLENIDTENIENKDDLDDQDDLHSDIKLDGRSDSE
ISDGYEDLQGPDQRFLKSVGKEGKDAERVGGEHFHGHHHHSHLHSHHHHHHSALDTKASQ
ANGDQLKLNPASVVGSPPSENNPAPAQKPKIWSLAETATAPDNPRKSPHVSGGHSGAGPA
AQTIVAPHRLISSCPVGKMQNWTNRAFSAHQLALLNSNHYLGLANQATATGLALYSSSSR
HTEDKSHSSETSVTGTCPRH
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccacagctgggatatcagtacatccgaccgatatacccgccggagcgccag
gggatcgccagcaacgcccgggccgggacagagctcagtccgtccggcgcgctctccaac
gtcctctccactatgtacggatctcctttcgccgcggcggcgcagggctacggagcgttt
ctgccctactccaacgacatatccattttcaatcagctgggtgctcagtatgaactcaag
gacagccccggtgtccagggacacccagggttcgcccaccatcatcccgcgttctatcca
tacggccaatatcagttcggtgacccgtccagacccaaaaacgccaccagggagagcacc
agcaccctgaaggcctggctcagcgagcaccgcaagaacccttaccccaccaagggcgag
aagatcatgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgcc
aacgccaggaggaggctaaagaaggagaacaagatgacctgggccccgcggaaccgcacc
gacgaagagggaaatgtttacggcagcgatcacgagggggaggagggggacaagagggag
gacgaggaggagatcgacctggagaacattgacacggaaaatatcgagaacaaggacgac
ttggacgaccaggacgacctgcattcagacattaaactggacgggaggagtgactctgag
atttctgacggctatgaggatttacaagggcccgaccagaggtttctaaagtctgtgggg
aaagaggggaaggacgcggagagggtggggggggagcacttccacggccaccaccaccac
agccacctccacagccaccaccaccaccaccactccgctttggacaccaaagcgtcccag
gcgaacggcgaccagctcaaactgaacccggcgtccgtggtcggctcgccgccatcggaa
aacaaccccgcgccggcccagaagccaaagatctggtctttggcggagacggccacggcc
cccgacaatccgcgcaagtcgccgcacgtcagcggcggccactcgggcgcggggcccgcc
gcgcagaccatcgtcgccccgcacagactcatctcttcgtgtcccgttgggaaaatgcag
aactggacgaaccgagccttctcggcgcatcagctggctttactgaactcgaaccactac
ctggggctggcgaaccaggccacggccaccggcctggcgctgtacagcagcagcagcagg
cacacggaggacaagagtcatagttcagagacgtcagtcacaggtacatgtccccgacac
tga
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