Pungitius pungitius (ninespine stickleback): 119198480
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Entry
119198480 CDS
T07626
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119198480 (rnf6)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119198480 (rnf6)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119198480 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
119198480
NCBI-ProteinID:
XP_037311596
LinkDB
All DBs
Position
19:complement(5973735..5979459)
Genome browser
AA seq
718 aa
AA seq
DB search
MDPPGGGDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERMSSQPRTELRAQAADSGEQQGGSGESEERGAGGRRVAGAAEPGAEPSNGDSLLEW
LNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQPEPGEHNDTVDPAE
LPVAAPSITSPSIRTASSFSNPRSSTTPRPVPYPTPRPALIRRMQTRRTRSSTTSLFMSP
PALPAPVASPPAADRSATLHSLAPTPTVSNPPLDQTTPLQPQALNAEVVQGSDDISASLD
CPRVSLQSASQAPAAEHELRGRRTRSRGRARRAAVGGGVSSRLSRRSRSPLHRIPVASTT
PPSSSGVSGSSIPPIEPGSGTSSVSVETVEAVAEPAALTEPAVESGERDSESHAVGAGSS
AVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTFESDSGGFRRTISRSE
RAGIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGELSSLMETEADSETVAP
SHTDAGVTNSSTSPASRLHTSETEAGQVGASRVDQERAGLVGGEEDQVGQARVGGAVVSS
TEARPTSRDTNNLVENGTLPILRLAHFFLLNDEEDDEHPRGLTKEQIDNLSTRTYGQASL
EGEIGRACSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPILAVHHD
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctggtgggggagacgaacgccggaggcaagcagagcgtcttcgtcgggag
gaggcttactatcacttcattaatgaattgagtgaagaggagtaccgcctcatgagggac
agcaacctgcttggcacccctggggaggtgactgccgaggagcttcggcaacgtcttgat
ggagcaaaagagcgaatgtcttctcagcctcggaccgagctgcgcgcgcaagccgccgat
tctggagagcagcagggcggcagcggcgagtccgaggagagaggggccggaggcagacga
gtagcaggggccgcagagcctggagccgaaccatctaatggtgactcattattggagtgg
ctgaacacttttagacgcactggtaatgccactcgcagtggtcaaagtggcaaccagaca
tggcgtgctgtcagccggaccaaccccaacagtggagagtttcgctttagcctggagatc
aacattaaccatgatcagccagagccgggggaacataatgacactgtggaccccgcagag
ctgccggtggctgccccgagcattacctcaccttccattcgcactgcttcctcattctcc
aacccccgctcctcaaccacgccacggccagtcccgtaccccacccctcgccccgccctc
attaggaggatgcagacacgccgtacacgcagtagcactaccagtctttttatgagcccc
cctgcacttcctgcacccgtggcctccccacccgctgctgatagaagtgccacattgcac
tctttagcccccactcctactgtttccaacccacctcttgatcaaacgacaccgttgcaa
cctcaagccctgaatgcagaagtagtgcagggcagtgatgatatttctgcttctttagac
tgcccccgtgtgtccctgcagtctgcatcccaggcccctgcggcagaacacgaattgcgc
ggcaggaggactcgatcacgtggtcgtgcacgcagggctgccgtcgggggcggggtttca
tcccgcttgtcaaggcgcagtcgttcccccttgcacagaatacctgtggccagtaccact
ccaccgtcaagtagtggtgtcagtggctccagcatcccccctattgagccaggcagtggc
acaagctctgtttccgtggagacggtggaggctgtggcagaacctgcagctctaacggag
cccgcagtagagtcaggagagcgcgatagtgaatcacacgcagtgggagcaggaagttcg
gcggtgcgacggcacccaactatcatgttggacctgcaagtgagaaggatccgacccggc
gaaaaccgcgatcgggacagcatcgccagccgaacgcgttctcgcgcccgggtagctgag
aatacggtcacctttgaaagtgacagtggtggatttagacgcaccatctcccgctctgag
cgagctgggatccgcacctatgtgagcactatccggattccactgcgacgtatcagtgag
acgggcctgggcgagcccaactccaccgccctgcgttctattttgcgccagatcatgact
ggattcggggagctcagctccctgatggagaccgaggctgattcagagactgttgcacct
agccacacagatgctggtgttacaaatagtagcaccagcccagccagtcgtctacataca
agcgagaccgaagctggccaagtaggcgccagcagggtagatcaggagagggcggggctg
gtgggcggtgaggaggaccaggtagggcaggccagggtcggaggagcggtggtgagcagc
acagaggcacggcccaccagcagagacaccaacaacctggtagaaaacggtactctaccc
atcctccggttggcccacttcttcctgctcaatgacgaggaggatgatgaacacccgagg
gggctcaccaaagagcagattgacaatctatccacacgtacctatggccaagccagtcta
gagggagagataggtcgcgcatgcagtgtttgcatcaatgagtatgcccagggcaacaag
ctgcgccgcctgccctgctcccatgaattccacattcactgcattgaccgctggctctct
gaaaacaacacctgtcccatctgcaggcagcccatacttgcagtgcaccatgactga
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