Pungitius pungitius (ninespine stickleback): 119198491
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Entry
119198491 CDS
T07626
Symbol
zcchc2
Name
(RefSeq) zinc finger CCHC domain-containing protein 2 isoform X1
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
119198491 (zcchc2)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
119198491
NCBI-ProteinID:
XP_037311622
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All DBs
Position
19:16337348..16344942
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AA seq
1051 aa
AA seq
DB search
MMLKMKREMKTGDGAAEDDPLDPQQQRRGPGAAPPAPVSGGLSESPRADVRPPPLDKETV
FEWFGLHLNPAKRIEFMCGLLHMCQPLELRFLGSYLEDLARKDYHVLRDVEFRANSPGDL
GALTDVVDPVVRSKLLVCLSLLGSDSRECAGILFRILSHVDPAVFYNQPLRPPGRDANGP
GSPERTCGFSADEEPAGPLEQLALLFAMASLHPAFHFHQREMVRGQLDKIELAIGEESRL
SGPPVAAHRPEQPGQKVGGRAASHQPCQSRRSSRWAAQREAVHIEGIVLKGISGTTVDKQ
YDFEVKWSDSSCSSVTKSHLELENFLLKLPKDKCSESFEKGILRLLNLGGHNDSRQVETH
LREQFLSAPPVFRQTRKVCSFFRGDSGCSSNPPRCRCNCQLAKAHQGGCSDASSQEEDME
SYAQGHKKKLGAKSPCQRSVQGVYCTFLPGCPPQHPLSNVPPLSTSLTAARGPTGDSRRG
GHAADLGRRKSCPLRSSQEAEQQQAAEGRSHPSSKSKGRAPPTDRDEVKGAASGRLALAQ
RRDPFGETSSESSSSPSSPHHPPAESLESEEDHNRDTDSHSDDSSSALGPDMFFAPQTNP
SVGGVSVHPARPEAGTVLPPVSVMPFPLYGAADPPLPLAPPPTQSIGPDGKPSPGTPMVQ
MPPVPPAAQGPGKDPEKRDILPTSGIPPVAPPISGSPTMQPVVQRFKTAPGGSDAAPNPS
QQAPVRAMGLLPPGPTSFSSPVHQSQPSQDPGPPPLPHGEPLPAKHPSSTLPSCLPSPYT
APPSHTAGVPATTGHVQAALPPAVPTHTPGPAPALSPAPTPGPAPTRSTAHGDCTSYSNS
SASCGTPLAFQQTQQQQQQHLPPQQPTPPQQQSMCCGTCGCHNNCGGGRGGSSAPLFFSH
QMAAARQVFSVPPPLFQLTSLCSNSFLTQAPHQPNGAAALPPFFPTAAPPAHPSPYGPLH
SHADLPSHVLGPQGANYGLQQQSFCQRVYQHVYPNPLGRLGGGGVNKKSGNVSCYNCGLS
GHYAQDCNQPSIDSTQQGGAATRNRDKQRTP
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgaaaatgaagcgagagatgaaaacgggcgacggagcggccgaagacgaccca
ttggacccgcagcagcagagacgcggccccggggcggccccgcctgctccggtgtccggc
ggactgagcgagtcgccccgggccgatgtgcgcccgccgccgctcgacaaggagaccgtg
ttcgagtggttcggcctgcacctgaaccccgccaagcggatcgagttcatgtgcgggctg
ctgcacatgtgccagccgctggagctccgcttcctgggatcttacctagaagacctggcg
aggaaagactaccacgttttaagagacgtcgagttccgggccaatagtccgggcgacttg
ggggcgctaacggacgtggtggatccggtggtgcgctccaagctgctggtgtgcctgtcc
ctgctcgggtctgacagcagggagtgtgctggaatactctttcggatcctgagccatgtg
gacccggccgtgttctacaaccagccgctgcgtcccccgggtcgggacgcgaatggcccc
gggagtccggagcggacctgcggcttctccgccgacgaagagccggccggacctctggag
cagctggcgctgctcttcgccatggcctcgctgcacccggcgttccacttccaccagcgg
gagatggtccgaggacagctggacaagatcgagctcgctatcggggaggagagccgcctg
agtggcccccccgtggccgcccatagaccggagcagccggggcagaaggtggggggccgc
gctgcgtcccatcagccctgccagagccggcgctccagccgctgggcggcgcagagagaa
gcagtgcacatcgagggcatcgtgctgaagggcatctctgggaccacggtggacaagcag
tacgactttgaggtgaagtggtccgactcctcctgcagcagtgtgaccaaaagtcacctg
gaactggagaacttcctgctgaagcttcctaaggacaagtgcagcgagtcttttgagaag
ggcatcctgaggcttctgaacctggggggccacaatgacagcaggcaggtggagacgcat
ctcagggagcagttcctctctgctcctccagtcttcagacagaccaggaaggtgtgcagc
ttcttcaggggggactcgggttgctcttcaaacccccctcggtgcagatgtaactgccag
ctggccaaagctcaccagggaggctgttctgatgcctctagtcaggaggaagatatggag
tcgtacgctcagggacacaagaagaagcttggggccaagagtccatgtcaaaggtcagtg
cagggtgtgtactgcaccttcctaccaggctgccccccgcagcatccactcagtaacgtc
cccccgctctcaaccagcctcactgctgccaggggccccacaggggatagtcggaggggg
ggccacgctgcggaccttggtaggaggaagagctgtccactgaggagcagccaggaggct
gagcagcagcaggccgctgaggggaggagccacccgagcagtaaaagcaagggccgagcc
ccgcccacagacagggacgaggtcaaaggtgcagccagcggcaggttggcgctcgctcag
aggcgagatccgtttggtgaaacatcgtcagaaagctccagctccccatcgagcccccac
cacccacctgcagagagcctggagagtgaggaggaccacaacagagacacagacagccac
tctgatgactccagcagcgctctgggtcccgacatgttcttcgccccccagaccaaccca
tctgtggggggggtctcagtgcacccggcccgcccagaggccggcacagtcctccccccg
gtgtccgtcatgccctttcccctgtacggggctgctgaccccccacttccactggctcct
cctcccactcaaagcatcggaccggatgggaagccctccccagggaccccgatggtgcag
atgcccccggtacctccagctgcccaaggccctgggaaggatcctgagaagagggacatc
ctcccaacgtctgggattccacctgttgcccccccaatttcaggaagtcctactatgcaa
cctgtggttcagaggttcaagacggctccagggggcagtgatgcagcccccaacccctcc
cagcaggctcctgtgagagcaatgggcctcctgccccctggcccgacgtccttctcctcc
cctgtgcaccagtctcagccctcccaggacccgggccccccccccctgcctcacggcgag
cctttacctgccaagcaccccagctcaacgttaccatcctgcctgccttctccctacact
gcccccccctctcacacagcaggggtacccgccaccaccggacacgtgcaagcagctctg
cctccagctgtgccgacccacactcccggcccggcccccgccctcagcccggcccccacc
cccggcccggcgcccacgcgcagcacggcccacggcgactgcacgtcctacagcaacagc
agcgcgtcctgcgggactcctcttgccttccagcaaacccagcagcagcagcagcagcat
ttgcccccccagcagcccacacccccccagcagcagtcaatgtgctgtgggacctgcggg
tgtcacaacaactgtggtggggggcgcggcggcagcagtgctcccctgttcttctcccac
cagatggcagcagcgcgccaggtcttcagcgtccccccccccctcttccagctcaccagc
ctgtgcagcaacagcttcctcacgcaggccccccaccagcccaacggggccgccgccctg
ccccccttcttccccactgctgcaccgcccgcacacccgtccccctacggccccctccac
agccacgccgacctgccgtcccacgtgctgggcccccagggcgccaactacggcctgcag
cagcagtctttctgccagcgcgtctaccagcacgtgtaccccaacccgctggggaggctg
ggggggggcggagtcaataagaagagcgggaacgtgtcctgttataactgtgggctgagt
ggccactacgcacaagactgcaaccaaccctccatcgactccacccagcagggtggggca
gccacgcggaaccgggacaagcagaggacgccgtag
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