Pungitius pungitius (ninespine stickleback): 119198511
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Entry
119198511 CDS
T07626
Symbol
itga11a
Name
(RefSeq) integrin alpha-11a
KO
K06587
integrin alpha 11
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04810
Regulation of actin cytoskeleton
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119198511 (itga11a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119198511 (itga11a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119198511 (itga11a)
04810 Regulation of actin cytoskeleton
119198511 (itga11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119198511 (itga11a)
Cell adhesion molecules [BR:
ppug04515
]
Integrins
Integrin alpha subunits
119198511 (itga11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
LYRIC
Motif
Other DBs
NCBI-GeneID:
119198511
NCBI-ProteinID:
XP_037311667
LinkDB
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Position
4:21397635..21428618
Genome browser
AA seq
1192 aa
AA seq
DB search
MEYFCFLLLWICSQMIGFHDCFNIDTKNFRIIKGPKQAQFGYTVQQHIAAGGEKWLLVGA
PYEMNGNHQTGDIYKCSLSRRTNGNGCSKLNLGRITLTNVSERKDKMRLGMTLTSNPKDN
SFVACGPLWSYECGSSYYSTGICSRVNASFKFSRTIAPAFQKCETYMDIVIVLDGSNSIY
PWYEVQAFLINILQKFYVGPGQIQVGVVQYGEKVVHEFKLSDYKSVEEVVKRAQSINQRG
GEETNTALGINVARSQAFTRGGRRGAKKVMIVITDGESHDSADLKQAIEDSEADGITRYA
IAVLGYYNRRGINPEAFLKEIKDIASDPDDKHFFNVTDESALKDIVDALGERIFSLEGTS
KNGTAFGLQMSQAGFSAHNVEDGILVGAVGAYDWNGAVLKETRQGKVVPPKSSYTQEFPE
ELKNHGAYLGYTVTSVVSARSGRLLVAGAPRFNHTGKVIIFTLKNSGNLTILHALKGQQI
GSYYGSEIAPLDLDGDGITDNLLVAAPMFFSGGLEKGKVYIYRVTELNRFLLEGVLEIHN
GGQNARFGSSLAPVPDLNGDGFNDLVVGAPLEDDHKGAIYVFFSQHNRILRKYKQRIAAA
DLAPGLLYFGRSVHGAMDMNDDGLVDLAVGSLGAAVLLWSRSVVRIYTTVRFEPSKVNIF
VKDCQRGGKDVTCMSAIVCFNITARTAVSPTQEVGIKYNVSIAERRFNPRAMLDNPNKLQ
PQNLTLLPGEEACEHIYFHVMETTDYARPIVFAAQAELQDPARGPVLDDSWPTVARTELP
FWNGCDEDDRCTPDLALRSATDLMTRSQFCAQPVQSRGAFCRQQSEGGGEVSLRLLEGNR
RRMVVDVRLENKGENAYNAGLNITYTPNLRFSSLIVKDNSDIKIECLIEDKLRTEKICNV
SAPFMRAKTQVSFRLEFEFSRTVFLQHVRVTLEARSDGEEMSTADNFNDIYYSLKYEGDL
LFTRDSNPTRYDIKSELSLEEPGVIGPLFNFTFQIQNLGYFPVRDLQLNIEIPEMTKNGN
QLLQISDFSIDQRDGSRCLPPQHVAQSRAAPEDLSRFSRLNRSNTLTLPMQCTLNVASNR
EIAVRITGALRIDTLHALKFKILELGTSASVELLSSSPMFLHEERPVRHIILEIRKEGDY
RISNWIIIGSTLGGLLLLALLSLALWKMGFFRRQKRRDEDEQEANGAVAEER
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggagtacttctgcttcctgctgctctggatctgcagccagatgataggcttccatgac
tgcttcaatatcgacacaaagaacttccggatcatcaaaggcccgaaacaagcccagttt
ggatacactgttcagcagcacattgctgctggaggagagaagtggttattggtgggagct
ccgtatgaaatgaatggcaaccaccaaacgggggatatttacaaatgttcactgagccga
cggaccaacggcaacggttgttccaagctcaacttgggaaggataactctgaccaacgtg
tcagagcgaaaggacaagatgaggctgggaatgacgctcacttccaaccccaaagacaac
agctttgtggcgtgtgggcccttatggtcctacgagtgcggcagctcctactacagcact
ggcatatgctccagagtcaacgcaagcttcaagttctccaggaccattgcgcccgccttt
cagaagtgtgagacctacatggacatagtgatcgttctggacggctcaaactccatctac
ccctggtacgaggtgcaggcctttctcatcaacatccttcagaagttctatgttggacca
ggtcaaatacaggttggagtcgttcagtacggcgagaaggtggtgcatgaattcaaactg
agcgactacaagtctgtggaggaagtggtgaaaagggcgcaaagcatcaaccaacgaggt
ggggaggagaccaacacggctctgggcatcaacgtggcgcgctcgcaggctttcacgcgg
gggggtcgccgcggcgccaagaaggtgatgatcgtgataaccgacggggagtcgcacgac
agcgccgatctcaagcaagccatcgaggacagcgaggcggacggcatcacccgttacgcc
atcgccgtcctcggctactacaaccgtcgaggaatcaaccccgaggctttcctcaaggag
atcaaggacatcgccagcgacccggacgacaagcacttcttcaacgtgacggatgagtcg
gccctgaaggatatcgtggacgcactcggagaacgcatcttcagcttggaaggaaccagt
aagaacgggacggcgtttggcctccagatgtctcaggcgggattttccgcacacaacgtc
gaggacgggattctggtcggtgcagtcggcgcttacgattggaacggagccgtgctgaag
gaaacgcgacagggcaaggtggtgcctcccaaatcgtcctacacccaggagttccccgaa
gagctgaaaaaccacggtgcctacttgggttacaccgtgacgtctgtggtgtcggcccga
agcggccgcctcctcgtggcgggagccccgcggttcaaccacaccggcaaagtcatcatc
ttcacgctgaagaactcgggcaacctcaccatcctgcacgctctcaagggccagcagatc
ggctcctactacggcagcgagatcgcacctttggacctggatggcgacggcataactgac
aaccttttggtggcggcgcccatgttcttcagcggaggcctggagaaggggaaggtctac
atctacagagtgacagagctgaaccgcttcctcctggagggggttttggagatccacaac
ggtggccagaacgcccgctttggctcctcgctggctcccgtgcccgatctgaacggcgac
ggcttcaacgacttggtggtgggagccccgctggaagatgaccacaaaggagccatttac
gtgttcttcagccagcacaacagaatactgcgcaagtacaaacagaggatcgcagcagcg
gacttggctcccggcctgctgtactttggccgcagtgttcacggcgccatggacatgaac
gacgacggcttggtggacctggcagtaggttctcttggtgctgctgtcctgctttggtcg
cggagcgtggtccggatatacaccactgtcaggttcgagcccagtaaggtcaacatcttc
gtgaaggactgtcagagaggcggcaaggacgtgacctgcatgtcagccattgtgtgtttc
aacatcactgccaggacggccgtttctcccacacaggaagtcggcatcaagtacaacgtc
tccatcgcggagagacgcttcaaccctcgcgccatgttggacaacccgaacaagctgcag
cctcaaaacctgaccctcttacccggagaggaggcctgcgaacacatctacttccacgtc
atggagaccacagactacgcacggcccatcgtgtttgccgctcaggcggagctccaagac
ccggcccgcggaccggtcctggacgacagctggcctaccgtcgcgaggaccgagctgccc
ttctggaacggctgcgacgaggacgaccgctgcacgcccgacctggccctccgcagcgcc
accgacctgatgacccgcagtcagttctgtgcgcagcccgtccagtcccgcggggccttc
tgccggcagcagagcgagggagggggcgaggtttctctgcgcctgctggaggggaacagg
aggaggatggtggtggacgtccgattggagaataaaggagagaacgcctacaacgccggc
ctaaacatcacctacacgcccaacctacgcttctccagtctcatcgtcaaggacaactct
gacatcaaaatagagtgtttaattgaggacaaactgaggactgagaagatctgcaacgtc
agcgctcccttcatgagggccaaaactcaggtgtcgttccgtctggagtttgagttcagt
cggaccgtcttcctgcagcacgtcagggtgaccctggaggccagaagcgatggcgaggag
atgagcacggcggataacttcaatgacatctattactcgctgaaatacgagggagacctt
ctcttcactagggattcaaatccgactcgatatgacatcaaatcagagctgtcgctggag
gagcccggagtcatcggtcctcttttcaacttcacgttccagatccagaacctcggctat
tttccagtacgagatctgcagctgaacatcgaaatccctgaaatgacaaaaaatgggaac
caactcctgcagatatctgacttttctattgaccaaagagacggatcgcgctgtttgccg
cctcagcatgtggcccagagcagggcggcaccggaggacctttcccgcttctcccgcttg
aaccggtccaacactctgactctgccgatgcagtgcaccctcaacgtggcctccaacagg
gaaatagcggttcgaatcacaggagcgctacgaatagacaccttacatgcactgaagttt
aaaatcctggaactgggaaccagcgcatcagtggagcttctgtcctccagccccatgttt
ttacacgaagagaggcctgtcagacatataatattggagatcaggaaggagggggattac
agaatctctaactggatcattattggaagcacgctgggcggactcttattgttagccctg
ctcagtctcgctctatggaagatgggattcttccggaggcagaagcgcagggacgaagac
gagcaggaggccaacggcgccgtggccgaagagcggtaa
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