Pungitius pungitius (ninespine stickleback): 119198538
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Entry
119198538 CDS
T07626
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11 isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119198538 (dcaf11)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119198538 (dcaf11)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_LRRK2
PROPPIN
Motif
Other DBs
NCBI-GeneID:
119198538
NCBI-ProteinID:
XP_037311750
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All DBs
Position
19:14387918..14396508
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AA seq
638 aa
AA seq
DB search
MGSQSSSGMSGGRGSSSGNPAEQPEASEPNQSSSSSSSSSSSSNSSRGRRTTDGQQGDRQ
PASEEDVDLAEVLAYLLRRGQVRLVHGSGATGLQLVQSYSDSDEDSDGAWDGRLGDRYNP
PVDAQPDTHEVDQSEIRTQILLATGSFSAKGRHSFTHMLTERRQGRCRGASFSHGECSRI
RTHFLPNYVSHKDTYQQKAFCGVYSEDGNMFLSACQDQNIRLYDTSRGRFHLRRTVKARD
VGWSVLDVCFTPDAQNVLYSSWSDYIHLCSIDGDSENHTALDLNPDERRFCVFSLAASTD
GNEILGGANDGCLYVFDLEQNKRTLKIEAHEDDVNAVAFADSSSQLLFSGSDDALCKVWD
RRTLREDRPQPVGQLAGHRDGITFIHSKGDARYLISNSKDQSIKLWDIRKFSPKEGLAAS
RVAVTQQNWDYRWQQVPQRGPVSLFSPEETQAHRRHLGDDLPRPRRPAHPGPQPLLPRVH
HGTEVHLLRLLHRQSHHLRRPDGRRGLQTVGPRRVREGRQLAPVRGQHRQQLLGRSGANV
AAPTDPPAGGGERAGPRLTAGGGWGGRPQKKRVKRNCDITTVEARLHAHKDEETINYFFN
SMLDINDCGVVVTCLFGRPYSLALSAAFWGTMGQPTPA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgggctctcagtccagttctgggatgtcaggtggaaggggctcttccagtggcaaccca
gctgagcagcccgaagcatcagaaccaaaccagagcagcagcagcagcagcagcagcagc
agcagcagtaacagcagccggggccgcaggacgactgacggccagcaaggagacagacag
ccagcatcagaggaggacgtggacttagctgaagtgctggcttacctactgaggaggggc
caggtccggctggtccatgggagcggagccaccgggctgcagctggtccagtcgtactct
gactccgacgaggacagcgacggagcctgggacggccggctgggtgaccgctacaatccg
ccagtggacgcccaacccgacacacatgaggtggaccagagcgagatccgaactcagatc
ctgctggccaccggctccttcagcgccaaaggccgccacagtttcacccacatgctcaca
gagaggaggcagggcagatgtagaggcgccagtttttctcatggagagtgcagtcgtatc
cgcacacattttctgccaaactatgtatcgcacaaggatacgtaccagcagaaagccttc
tgtggagtgtacagcgaggatggcaacatgttcctctccgcctgccaagaccagaacatc
cgcctgtacgacacatccaggggccgcttccacttgcggagaacggtgaaggctcgcgac
gttggctggagcgtcctggacgtctgcttcacccctgacgcccaaaatgtgctctactcc
agctggtccgactacattcatttgtgcagcatcgacggagacagtgaaaaccacaccgcc
ttggacctcaatccagatgagaggaggttctgtgtgttctcactggctgcgtccacagat
ggcaacgagatcctgggaggagcaaacgacggctgcctttatgtctttgatctcgagcag
aacaagcgaacgctgaagatcgaagcccacgaggacgacgtgaacgcggtggcgtttgcc
gacagctcgtcccagctgctcttctctggcagcgacgacgcgctctgcaaggtgtgggac
agacggacgctgcgcgaggacagaccgcagcctgtcggacagctggccggccaccgagac
ggcatcaccttcatccacagcaagggtgacgcgcgctacctgatcagtaactcaaaggac
cagtccatcaagctgtgggacatcaggaagttctcccccaaagagggcctggcggcttcc
cgggtggctgtcacgcagcaaaactgggattaccgctggcagcaggttccccagagaggt
cccgtgtcccttttcagccctgaagagacacaagctcacaggcgacacctcggtgatgac
ctaccgcggccacggcgtcctgcacaccctggtccgcagccgcttctcccccgagttcac
cacgggacagaagttcatctactccggctgctccaccggcaaagtcatcatttacgacgt
cctgacgggcgccgtggtctccagactgtcgggccacgacgcgtgcgtgagggacgtcag
ttggcacccgtacgaggacaacatcgtcagcagctcctgggacggagcggtgcgaatgtg
gcagcaccgacagacccacccgctggaggaggagagagagcgggaccgagactgacagcc
gggggggggtgggggggcagaccgcagaagaagagagtcaaacgaaactgtgacatcacc
acagtggaggcgaggctacacgctcacaaggacgaagagacaattaactatttttttaat
tcgatgctggatattaatgattgtggcgtggtggtgacgtgtttatttggaaggccttat
agcctcgcgttgtcggcagcgttttggggcacaatgggacagcctactcctgcttga
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