Pungitius pungitius (ninespine stickleback): 119198554
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Entry
119198554 CDS
T07626
Name
(RefSeq) cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119198554
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Major cadherins
119198554
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_4
Cadherin_CELSR2_9th
Stevor
RET_CLD1
DUF443
Fibulin_C
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
119198554
NCBI-ProteinID:
XP_037311779
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Position
19:1727368..1772048
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AA seq
805 aa
AA seq
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MLTRNCLLLFLWVLVDEGSVSSLHPPSAALGRSRLAREHARGSVGPMRNGAAGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDGGDNAVKYTLSGDGAGSIFTIDQTTGDIHALR
SLDREEKPYYTLRAQAVDIDTNRPLEPESEFVIKVQDINDNEPKFLEGPYTATVPEMSPV
GAYVTQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIKTALPNMDREVKEQYQV
LIQAKDMGGQLGGLAGTTFVNITLSDVNDNPPRFSKSFFHLRVPESSSVGSAVGRIKAHD
LDIGRNAEVEYTIVPGDGGAMFDITTNDHNQEGIIILKRHLDYESKKAYTFRVDATNSHL
DPRFQSFGAFKDTATVKINVLDVDEPPVFNKPSYVMDVYEDTPAGTIIGAVTAQDLDASG
SPVRYSIDWKSDMDSYFDIDPVEGTISTNELLDRESIARHNISIVATKLNSPVLTSRVAV
AVNVLDINEFPPELANPHETFVCENAKVGQVIQTFSAKDEDLPTAGQQFSFRSPKEDIKN
KNFTIRDFGNNTAGIVTKRNGFRRRLQEIYLLPVVIDDNGYPPKSSTGTLTVRVCGCESN
GSLLTCSAEAIFLPVGLSTGALVAILLCIIILLVIVVLYVGLRRQKKKETLMSSKEDIRD
NVIHYDDEGGGEEDTHAFDMGTLRNPKVVKENLFRRDVKPETKRGPRPPASQDSADMRDF
IAERLREHDVDNAAPPYDSLATYAYEGGGSAAESLSSIGSAAAAAGPGEDYDYLEDWGPR
FKTLAGIFGEQSETRSDFATTENTQ
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaaggaactgcctgctgctgttcctttgggttcttgttgacgaaggctcagtc
tcttctttgcatccaccctcggcggcactgggacggagcaggctggcgcgggagcacgcc
aggggttcggtgggcccgatgaggaatggggcggctggatttcagcgggtcaaaaggggc
tgggtgtggaaccagttctttgtgctggaggagtacatggggtcggacccgcagtacgtg
ggcaagctgcacactgacctcgacgggggggacaatgcggtgaagtacactctctcggga
gacggcgctggctccattttcacaattgaccaaacgaccggggacatccatgccttaagg
agccttgacagggaggagaagccttactacacccttcgcgcccaggccgtcgacatcgac
accaacaggcccctggagccggaatccgagttcgtcatcaaggttcaagacataaacgac
aacgagccaaagtttctggagggcccgtacacggccactgtccccgagatgtccccagta
ggggcgtatgtgacccaagtgacagccacggatgcagatgaccctacgtatggaaacagt
gccagagtggtatacagcatcctgcatggccagccctacttctctgtcgaccctaaaaca
ggtgttataaagacggccttgcccaatatggacagagaggtgaaggagcagtaccaggta
ttaatccaggccaaggacatggggggccagctcggggggctggccgggaccaccttcgtc
aacatcaccctcagcgacgtcaacgacaacccgcccaggttctccaaaagtttcttccac
ctgcgggttccagagtcttcgtccgtggggtccgccgtgggcaggatcaaagcccacgac
ttggacatcgggaggaacgccgaggtggagtacaccatcgtgccgggggacgggggcgcc
atgtttgacatcaccaccaacgaccacaaccaagaggggatcatcattctcaaaaggcac
ctggactacgaaagcaagaaggcgtacacctttagggtcgatgccaccaattctcacctg
gatccacgattccaaagcttcggggccttcaaagacacggcgacggtgaagattaacgtt
ttggatgtggacgagcccccggtgttcaataagccctcgtatgtgatggacgtgtacgag
gacacgcccgcgggcaccatcatcggcgcggtgacggcgcaggatctcgacgccagcggc
agtccggtcaggtattccattgactggaagagcgacatggacagctacttcgacatcgat
ccggtggagggaacgatttccaccaacgagctgctggacagagagagcatcgcccggcac
aacatctccatcgtggccaccaaactcaacagtccggtcctgaccagccgggtggccgtc
gccgtcaacgtgctcgacatcaacgagttcccgccggagctcgccaatccccacgagacc
ttcgtttgtgaaaacgccaaagtgggacaggtgattcagactttcagtgcaaaagacgag
gatctaccgactgctggacaacaattctccttcagatcaccaaaggaagacataaaaaac
aagaacttcaccatccgggactttggaaacaacacagctgggattgtgacaaagcggaac
ggcttccgacggcgtttgcaggagatctacctccttcccgtggtgatcgacgacaacggc
tacccgcccaagagcagcaccggcaccctgaccgtccgggtgtgtggctgcgagtccaac
ggctcgctgctgacctgcagcgccgaggccatctttctccccgtgggtctcagcacagga
gctctggtggccatccttctgtgcatcatcatcctgttagtaatcgtggtgctctacgtg
ggcctgaggcggcagaagaaaaaagaaaccctgatgtcgtccaaggaggacatccgggac
aacgtgatccactacgacgacgagggcggcggcgaggaggacacgcacgcgttcgacatg
gggaccctgcgcaacccgaaggtcgtcaaagagaacctgttccgccgggacgtcaagccc
gagacgaagcggggccccaggccgcccgcgtcgcaggacagcgccgacatgcgggacttc
atcgccgagcgcctgagggagcacgacgtggacaacgcggcgccgccctacgactcgctg
gccacgtacgcctacgagggcggcggctccgcggccgagtcgctcagctccatcggctcg
gccgccgccgccgcgggccccggggaggactacgactacctggaggactgggggccccgc
tttaagacactggcggggatatttggggagcagtcggaaactcggtcggacttcgccacc
acagagaatacgcagtga
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