Pungitius pungitius (ninespine stickleback): 119198555
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Entry
119198555 CDS
T07626
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119198555
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119198555
SSDB
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Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_PARP14_3
RRM_ACIN1
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
119198555
NCBI-ProteinID:
XP_037311780
LinkDB
All DBs
Position
19:15423309..15436910
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AA seq
518 aa
AA seq
DB search
MDGISDVAVGVKRGSDELSMYNSPNSGVSSVSDGASNGSDSKKLRVEEAPPSRVLHIRKL
PNEASETEVIALGLPFGKVTNILTLKGKNQAFLEMGTEEAAITMINYYTTVTPHIRNIPV
FVQYSNHKELKTDAGNQRTQAVLQAVSAVQSGGSPSSDVQEALAAASSPVLRIIIDNMFY
PVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPINAQQAKLALDGQNIYNSCCTL
RIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLESSVAAAFSKDSNSLLGKIPGALN
PLSAAAAAAAAAGRVALAGQAGSSGVLLVSNLNEEMVAPQSLFTLFGVYGDVQRVKILYN
KKDSALIQMSDANQAQLAMSHLNGQKMYGKIIRVTLSKHQTVALPRDGLDDQGLTKDYAN
SPLHRFKKPGSKNFQNIFPPSATLHLSNVPQDVTEEDLRLLFSNAGGTVKAFKFFQDRKM
ALIQMSTVEEAIQALIDLHNYNMGGNQHLRVSFSKSTI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagtgatgttgcagttggagtgaagaggggatcagacgagctgagtatg
tacaacagtcccaattctggcgtgagcagtgtcagtgatggggcttccaacggcagtgac
agtaagaagctgcgtgtggaggaggccccgccctcacgcgtcctccacatcaggaaactg
cccaacgaggcatcagagaccgaagtcattgccctgggcttgcctttcggcaaagtcact
aatatcctcacactcaagggaaagaaccaggctttcttggagatggggacggaggaggcg
gccatcactatgatcaactactacaccacggttacgcctcacatccgcaacatccctgtg
tttgttcagtactccaatcacaaagaactcaaaaccgacgccggcaatcagcggacccaa
gcggtgcttcaggcggtgtcagcggtccagtcgggcggctcgcccagctctgacgtccag
gaggctctagccgcagcctcaagccccgtcctgcggatcatcatcgataacatgttttac
cccgtgacgctggatgtactgcaacagattttctccaaatttggcacggttatgaagatc
atcacattcactaagaacaatcagttccaggcccttctgcagttcagcgatccaatcaat
gcgcagcaggccaaactggctctggatggccagaacatttacaactcatgctgcacgcta
cgcatcgacttttccaagctggtcaacctgaatgtcaagtacaacaacgacaagagtcga
gactacacgcggcccgagctgcccgccggcgacggccagcccagccttgagtcgtcggtg
gccgccgccttcagcaaagactccaactccctcctgggtaagatcccaggagccctgaac
cctctgagtgcggcggcggcagctgctgctgctgcaggcagggtggcgctcgctggacag
gcggggtccagcggtgtcctgctggtcagcaacctcaatgaggagatggttgcgccccaa
agtctgtttaccctcttcggggtgtatggcgatgtccagagggtgaaaattctttacaat
aagaaggacagcgctcttattcagatgtccgacgccaaccaggctcagctagccatgagc
cacttgaatggccaaaagatgtacgggaagatcatccgggtgactctgtctaagcatcag
accgtggcgctgcctcgggacggcctggacgaccagggcctgaccaaggactacgccaac
tccccgctccatcgcttcaagaaacccggctccaagaatttccagaacatcttcccgccc
tctgccaccctccatctctccaatgtcccacaagatgtgaccgaggaggatctgcggctg
ctcttctcaaatgctggaggaactgtgaaagcattcaagtttttccaggatcgtaaaatg
gctctgatccagatgtccaccgtagaggaggccatccaggctctgattgaccttcacaac
tacaacatggggggaaaccagcaccttcgagtctccttttcaaagtccaccatttaa
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