Pungitius pungitius (ninespine stickleback): 119198646
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Entry
119198646 CDS
T07626
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119198646 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119198646 (nup58)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119198646 (nup58)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
NUP58_M
Siah-Interact_N
Nup49_C
PSY3
XAC0095_dom
DUF5305
FapA
Motif
Other DBs
NCBI-GeneID:
119198646
NCBI-ProteinID:
XP_037311943
LinkDB
All DBs
Position
19:9463253..9474299
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AA seq
593 aa
AA seq
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MSGFNFGSGATNTGGGFAFGATASAPAANTGGFSIGGALGTAGTTLGAATSTPASSLGLG
GSLFGQKTAGFSFNTPASSAAAAPTTGLTLGAPAATAASTGFSLAFNKPTGSAAPFSLTT
APTSSAAPAGAGLSFGSVLTGTAPQQPAGGFSLGLGSTMTTAAASTGQSLGGSLFSNTLS
TGLGQTTLGGGGLTLGSLLAASTSISAAPAPSMGLGGVDFTTSSESKSDPSSGANAKDSK
ALKDENLPPVICQDVENFQKFVKDQKQVEEDISRMSSKGISKVQDDIKSLKQLLSVSASG
LQRQALAIEKLKLETAQELKNAEISLRTQKTPPGLQHENTAPSDYFHSLVEQFEVQLQQY
RQQIEELENHLTTQSSGSHITPQDLTLAMQKLYQTFVAQAAQLQSVHENVKILKHQYLSY
RRAFLEDSTDVFESKRASNRKWQSAPRITTGPAPFSNVPNAAAVAMAATLTQQQQPTPGT
QAPLGAGFGNPFASAVGSSLGSSTLGGFGGGPGFGGVGTGGSSFAFSTSKPTGGSLSAGF
GSSSSSGFNFSNPGLNPSAGLTFGVSNQATTGFGAAPLLQLKKPPAGNKRGKR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcttcaactttggatcgggggccaccaacactggtgggggatttgcatttggt
gccacagcaagtgcacctgcggccaacactggcggcttctcgatcggaggtgctctgggc
acagcaggcacaacactgggcgctgccaccagcaccccggcctcatctctgggtctggga
ggctctctctttggtcagaaaactgcagggttctctttcaacacccccgcatcaagcgcc
gccgccgcacccaccactggccttacattaggtgctccggcagctacagctgcgtccact
ggcttcagcttggccttcaacaagcccaccggctcagccgcccccttctccctcaccact
gctcccacctcctcagcggcccctgcaggggcaggtttatcatttggctctgtcctgaca
ggcacagctccccagcagcccgcgggaggcttctcgctgggtctgggctcaacgatgacc
acagcggcagcatcgacaggccaatcgctgggcgggagtctcttctccaacactttgtct
acaggtttgggtcagaccactcttggaggaggcgggttaacgttgggttctctattggct
gcatccacatccatatcagcggccccggccccaagtatgggcctgggcggagtcgacttc
actacttcctccgagagtaagagcgacccgtcgtctggagccaatgcaaaggacagcaaa
gctttgaaagatgagaacctccctccggttatttgtcaagatgttgagaatttccaaaaa
tttgtgaaagaccagaaacaagttgaagaagacatcagcaggatgtcctcaaagggcatt
tctaaagtccaagatgacatcaagagcctcaaacagcttctctctgtcagtgccagtggc
ctacagcgccaagctcttgccatcgaaaagctgaagctggagacggcacaggagctgaaa
aatgcagaaatatcattacgtacacaaaagactccccccggacttcagcatgagaacacc
gctccgtcagattatttccacagcctggtcgagcagttcgaggtgcagttgcagcagtat
cggcagcagatagaagaactggagaaccacctgacgacgcagagcagtggctcccacatc
actcctcaggacctgacgttggccatgcagaagttgtaccagacattcgtcgcacaggcg
gcccagctccagtccgttcatgagaatgtcaagatcttaaagcaccagtacctttcgtac
cgccgggccttcctggaagactcaacagatgtctttgagtccaaacgggcatcgaacagg
aagtggcagagtgctccgcgaatcaccaccgggcccgcaccgttctccaatgttcccaac
gctgcagcagttgccatggcagccacgttgacccagcaacagcagccaactccagggacc
caggcacccttgggggcggggtttggaaacccctttgcttcggcagtgggcagtagcttg
ggctcttctacccttggaggttttggtggtgggccaggatttggtggggtggggactggg
gggtcttcttttgccttctccaccagtaagcccacaggaggcagtctgagtgcaggtttc
ggtagcagcagcagctcaggctttaacttcagtaacccgggcctcaacccctcggctggc
ctgaccttcggtgtgtctaaccaagccactacgggctttggtgctgctcccctcctccag
ctcaagaaaccccccgctggtaataaacggggcaagagataa
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