Pungitius pungitius (ninespine stickleback): 119198666
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Entry
119198666 CDS
T07626
Symbol
rreb1a
Name
(RefSeq) ras-responsive element-binding protein 1 isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119198666 (rreb1a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119198666 (rreb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_8
zf-C2H2_11
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
119198666
NCBI-ProteinID:
XP_037311986
LinkDB
All DBs
Position
19:528967..560537
Genome browser
AA seq
1821 aa
AA seq
DB search
MSRRKQPNPNKVPPDMERCTEEQTREEVKVEESEEKTHNDLKAMNRVKEEASGGETLHNG
DRGGIMGADGGGDLSSINAMMSAVMSATGTINGGDGRRESGVPSANSSAGPSPSPSPTKS
LTGAMRAPPGRNARRTQDTKDESSAFICPLCDKDCQTQHQLTMHIRQHNTDAGATDHSCS
ICGKCLSSASSLDRHMLVHSGERPYKCNVCGQTFTTNGNMHRHMKIHEKDPASGLPALSP
PSPNKRRRPSAKRRQSPEEETGEEPPSKKMVEEATAVEAVAGVRGVEEELLPCPICFKTC
NSRLELDTHMDTHPDIALRCDLCCLSFRTHRGLLRHNAAVHDVLPQDPSGRPFIQSNPSI
PTGFNDLAFIDFSCKKFAHIAQVWCETNLRRCISKFHRFVCDCCDRAFPLRSALDLHKST
SHSASITQQEEEEQEEGGKEQQKENGGAAEDAVDSLSLKEEVPPPQQDDFLEALGLRHVS
KVKSGPTDDEIHQAHLDSIKVIHVEPPSSSLPQEPASAYLTGGLTLGGLAGSAALQGLSQ
RDAMSLLSLQPFQTGFLLHPDGGGAATAASSGFKPGEVGGAMELANIQQILNVASAAGQM
GLTLPPLAKAPGFPGGQGQAQAQKSMPPLKPKPPITPRSSLTATTPPPLQSSQHASLGCI
SPSLPPPNPTLFKTPSSSSSSSSSSSSAGTGGQLDAECDSPPASSAAVHEEAGLSGRKPG
TKGGSAKGSFPCRFCDQVFSFSGVLQAHMRFHLGILPHQCNICDYVAPDKATLIRHLRTH
SGERPYVCRVCHYPFTVKANCERHLRKKHAKTSRKEIEKNIKYITSTITANLASTQDTET
GCAGAETTCRFCGEDLKNYRALQIHLRTHNGCQRKPFECRRCGAAFLAKRNCIHHLLKQH
PEVQEREIEDHIATLLPASASARAPPANQTNGMGQALHAVKLEELANAVYAAELDQPLDF
SAKRRGGGGAGTPGSGSSGGGRSLAGSPGVKLESVSPSFDCRALDQPIDLSVPSKRPRRD
IKVEPSGASIVELQVLAPPKEDAAALPPLHPHPQLGCYQLPPGSTPPPASLANATRAARL
KPLLPKPASTSPSALKELPPLASIAQIISSVSGAPDLLKREEPKPPAVTSCPANAAAEAP
APPAGVEPQSEETPEGPARKRSRKKAAVKEKAIDLESSGEFASVEKMLATTDANKFSTYL
QTGAVELGGRRDVDRPGRGEEEKEGGAREEVKPASVGPQSKGKKNAYSNSVQKMTCPFCP
RVFPWASSLQRHMLTHTGQKPFPCPKCDAFFSTKSNCERHLLRKHGVTHRTLRRNGALGK
KDGDEGSHESAESQSETEQMAPEAQDLSSVNTSTDSGSAPTPESPAPSDQQDGDSVQSSP
AHKASRSCSPSAEQLESDATEQQGAPEAGGSSGPQPPQSSKVDMVVDDDDCHSNKSLDLN
FGKKLIDFKLSASSGPAQEEQGPQPAPSSSCAPQVALESQEKEQGASSSSSSSLSGSPAL
KQQPEYKHVCRVCRKSFRYATTLARHERAHLSEETQPATPQEEENPPAKEESTDGDAGQP
AEEKEEMEEAGGESERGESGESEEEEEEEEEEKKEEEEERSDEEASEPKSLEGGEASGRR
LDKRKKICNVCGKRFWSLQDLTRHMRSHTGERPYKCQTCERTFTLKHSLVRHQRIHLKPR
AADDASEDGDSCAPTPPSTCPPSDNESECGSANKALEGGEGADDEEEEEENPEKPAGADS
EPPASETSEDRPRPPADPTPAQQATDTKTTTTPDSVSKDPPSSSSSPPPPDLIQGLLEIH
TKPPLLEPVLPNVEPPLVGAD
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgcaagcagcccaacccgaacaaagtgccgccagacatggagcgctgcacc
gaggagcagacgcgggaggaggtgaaagtggaggagtcagaggagaagacgcacaatgac
ctcaaagccatgaacagagtaaaggaggaggcgagcggaggggagacgctacacaacgga
gatcgaggaggaatcatgggagcagatggaggaggagacttgtcctccatcaacgccatg
atgtcagctgtgatgtcggcgacggggaccatcaacggcggagacggaagaagagagagt
ggagtcccctcggccaactcctccgccgggccgtcgcccagcccctccccaacaaagtcg
ctcactggggccatgagagccccgcccggccgcaacgcccggcgcacacaggacaccaaa
gacgaaagctcagcttttatttgtccgctatgtgacaaggactgtcaaacacaacaccag
ctcactatgcacatcagacagcacaacactgacgccggagcgacggaccactcctgcagc
atctgtgggaagtgcctgagctcggcctcctctctggaccgacacatgctggtccacagc
ggggagaggccctacaagtgcaacgtctgtgggcagaccttcaccaccaacggcaacatg
cacagacacatgaagatccatgaaaaggaccctgccagcggcctgcctgccctcagcccc
ccgtcccccaacaagcgccgccgtccctccgccaagaggaggcagagtccagaggaggag
acgggggaggagccccccagcaagaagatggtggaggaggcgactgcggtggaggccgtg
gccggagtccgaggagttgaggaggagctgctgccgtgtcccatctgcttcaagacgtgc
aactctaggctggagctggacacacacatggacacacaccctgacatagcactgaggtgt
gacctctgctgtctgtccttccggactcaccgggggctgttgcgtcacaacgcggcagtg
cacgacgtcctcccccaggacccgagcgggcgccccttcatccagagcaacccctccatc
cccaccggcttcaacgacctggccttcatcgacttctcctgcaagaagttcgctcacatc
gcacaggtctggtgtgagacaaacctccggcgctgcatcagcaagttccaccggtttgtc
tgcgactgctgtgaccgagcctttcccctccgctcggccctggacctccacaagagcacc
tcccactccgcctccatcacacagcaggaggaggaggagcaggaggaggggggcaaagag
cagcagaaggagaatggcggcgctgcagaagacgccgtcgacagtctgagtctcaaggaa
gaagtcccgcccccgcagcaggacgacttcctggaggcgctcggtctccgccacgtttcc
aaggtgaagtccggacccacggacgacgagatccaccaggcgcacctggacagcatcaag
gtgatccacgtggagccgccctcctccagcctgccccaggagcccgcctccgcctacctg
accgggggcctgaccctcgggggcctggcgggctccgccgccctgcagggcctctcgcag
agggacgccatgagcctgctctccctgcagcccttccagacgggcttcctgctgcacccc
gacggcgggggggccgcgaccgccgcctcgtccgggttcaagcccggggaagtgggcggg
gccatggagctggccaacatccagcagatcctcaacgtagcgagcgcggcgggtcagatg
gggctgacgctgccgcctctggccaaagcccccgggttccctggaggtcaagggcaagcc
caggctcagaagtcaatgcccccgttgaagcctaaaccccccatcaccccccgctccagc
ctcacggcgacgacgcccccccccctccagagctcccagcatgcctcactgggctgcatc
agccccagcctgccgccccccaacccgactctcttcaaaacgccctcctcctcctcgtcc
tcctcctcgtcctcctcttcggccgggaccggagggcagctggacgccgagtgcgactcg
ccgccggcctccagcgcagcggtgcacgaggaggcggggcttagcgggaggaagccgggc
actaagggcggctcggccaaaggctcgttcccgtgccggttctgcgaccaggtgttctcc
ttctccggcgtgctgcaggctcacatgcgcttccacctcggcatcctgccgcaccagtgc
aacatctgcgactacgtggcgcccgacaaggccacgctgatccgccacctgcggacgcac
agcggcgagcggccctacgtctgccgcgtgtgccactaccccttcaccgtgaaggccaac
tgcgagcgccacctcaggaagaagcacgccaagacctccaggaaggagatcgagaagaac
atcaagtacatcacctccaccatcacggccaacctcgcctccacccaggacacggagacg
ggctgcgccggggccgagaccacgtgccgcttctgcggcgaggacctgaagaactaccgg
gcgctgcagatccacctgcgcacgcacaacggctgccagaggaagcccttcgagtgccgg
cgctgcggcgccgctttcctggccaagcgcaactgcatccaccacctgctgaagcagcac
cccgaggtgcaggagcgggagatcgaggaccacatcgccacactgctgcccgcctccgcc
tccgcccgggcgcctccggccaatcagaccaacgggatgggtcaggcgctgcacgccgtg
aagctggaggagctcgccaacgccgtctacgcagccgaactggaccagccgctggacttc
tccgccaagaggcgcggcggaggcggcgccgggactcccggtagcggcagcagcggcggc
gggcgcagcctggcggggtcaccgggggtcaaactggagagcgtctcccccagcttcgac
tgccgcgcgctggaccagcccatcgacctgtccgtccccagcaagaggccgaggagggac
atcaaggtggagcccagcggcgccagcatcgtggagctgcaggttctcgctccgcccaag
gaggacgcggcggccctgcctccgctgcacccccacccccagctgggctgctaccagctc
ccccccggatccacccctcccccggcctccctcgccaacgccacccgggccgcgcgcctc
aagccgctgctccccaagccggcctccacctcgccctccgccctcaaggagctcccccct
ctggcctccatcgctcagatcatcagctccgtctccggggcgccggacctgctgaagagg
gaggagccaaagccgccggccgtcacttcctgtccggccaacgcagccgctgaggccccg
gcgccgccggctggcgtggagccgcagagcgaggagacgcctgagggacccgccaggaag
cgctccaggaagaaggcggccgtgaaggagaaggccatcgacctggagtccagcggcgag
ttcgccagcgtggagaagatgctcgccaccaccgacgccaacaagttcagcacctacctg
cagaccggcgctgtggagctggggggcaggagagacgtagaccgacccggaagaggcgag
gaggagaaggagggaggagcaagggaggaggtgaagccggcctccgtggggccgcagtcc
aaagggaagaagaacgcgtactccaactcggtgcagaagatgacctgccccttctgcccc
cgggtgttcccctgggccagctcgctgcagagacacatgctgacgcacacaggtcagaaa
ccgttcccgtgtcccaagtgcgacgccttcttctccaccaaatccaactgtgagcgccac
ctgctgaggaagcacggcgtgacgcaccgcacgctgcggcgcaacggcgccctcggcaag
aaggacggggacgagggatcccacgagagcgcagagagccagtcggaaacggagcagatg
gctccagaagctcaagacctcagcagcgtgaacacctccacagactcaggctccgccccc
acgccagagagccccgccccctcggaccaacaggacggggattcggtgcagtcgagcccc
gcccacaaagccagccgcagttgcagcccgagtgcagagcagctggagtcagacgccacg
gagcagcagggggcgccagaggctggagggtcatctggaccccagcctccacagagcagc
aaggtggatatggtcgtcgacgatgacgattgccatagcaacaagagtctggacctgaac
tttggcaaaaagctaattgacttcaagctctctgcctcctcggggccggctcaggaggag
caaggcccccaacccgcgccctcctcctcatgtgctcctcaagtcgcgttggagagccag
gagaaggagcaaggagccagctcctcctcctcctcctcgttgtctggcagcccggcgttg
aagcagcagccggagtacaaacacgtgtgccgcgtgtgcaggaagagcttccgctacgcc
accacgctcgctcgccacgagagggcgcacctctccgaggagacgcagccagcgacgccg
caggaggaggagaacccgccggcgaaagaggagtcgacggacggcgatgcgggtcaacca
gcggaggagaaagaggagatggaagaagcaggaggggagagcgaaagaggggagagcggg
gagtcagaggaggaagaggaagaggaggaggaggagaagaaggaggaggaggaggagagg
agcgacgaggaggcgtcggaaccaaagagtttagaaggaggagaggcatcagggaggcgg
ctggacaagaggaagaagatctgtaacgtctgtggaaagcgattctggtctctgcaggat
ttaaccagacacatgaggtcccacacaggtgagcggccctacaagtgtcagacctgcgag
cggaccttcaccctgaagcacagcctggtccggcaccagaggatccacctgaagccgcgc
gccgccgacgacgccagcgaggacggagactcctgcgcgccgaccccgccctccacctgc
cccccctcggacaacgagagcgagtgtggtagcgccaacaaggcgctggaggggggggag
ggagcggacgacgaggaggaggaggaagaaaaccctgaaaaaccagccggtgcagattcc
gagccgccagcaagcgagacctctgaggaccgtccgcgcccccccgccgacccgaccccc
gcccaacaagctactgacacaaagacaactactacgcccgactccgtctccaaagacccc
ccctcgtcctcctccagccctcctccaccagacctcatccaagggctgctggagatccac
accaagccccccctcctggagcccgtcctgcccaacgtagagccccctctggtgggggcg
gactga
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