Pungitius pungitius (ninespine stickleback): 119198713
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Entry
119198713 CDS
T07626
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119198713 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppug01007
]
119198713 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119198713 (gars1)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119198713 (gars1)
Enzymes [BR:
ppug01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
119198713 (gars1)
Amino acid related enzymes [BR:
ppug01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
119198713 (gars1)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119198713 (gars1)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
119198713 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
DUF5915
OS-D
Motif
Other DBs
NCBI-GeneID:
119198713
NCBI-ProteinID:
XP_062415179
LinkDB
All DBs
Position
19:complement(5507652..5513781)
Genome browser
AA seq
749 aa
AA seq
DB search
MLRSAASALLRRTSTDIPALRPLTTVRIARQSLRYDPKNRPFSTSVRLSKKKKQSLWLQP
AEGQTMNGNIEAVLAPLRLAVKEQGDLVRQLKQDGAPDVDVTKAVAELKARKRTLEAKEL
SLQPKDDIVDRSKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRHHFI
QEEQILEIDCTMLTPESVLKTSGHVEKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKK
CTAEKKAEMEQVTTQMDNYTQQELTDLFVKYNVKSPTTGNDLTPPISFNLMFQTSIGPGG
NMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAE
IEHFVDPNEKVHPKFSNVADLDITLYSSKAQTSGQSAHIMRLGDAVEQGVINNSVLGYFI
GRIYLYLTRVGIAKDKLRFRQHMDNEMAHYACDCWDAEAKTSYGWIEIVGCADRSCFDLQ
CHARATKVPLVAEKPLKEPKVVNVVQFEPNKGALGKAYKKDAKIAMEYLSQCDEDFIADQ
ERLLSESGEFTIESEGKSFKLTKDMVAVKRFQKTLHVEEVVPNVIEPSFGIGRIMYTIFE
HTFHVREGDEQRTYFSFPATVSPYKCSVLPLSQNQEFMPFVRELSEAMTKNGVSHKVDDS
AGSIGRRYARTDEIGVAFGITIDFDTVNKEPHTATLRDRDSMRQIRAEVSELPVIVRDLA
NATLTWAEVESKYPIFEGQETSKKDTVEE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtagcgcagcatcagcactgctgaggaggaccagcactgacatccccgccctc
cgcccgctaacgacggtccggatcgctcggcagtcgctccgctacgaccccaaaaaccgg
ccgttttccacgtcggtccgcttgagtaagaagaagaagcaaagcctgtggctgcagccg
gcggaaggacaaaccatgaacggcaacattgaagcggttctggcccccttgaggctggcc
gtaaaagaacagggggacctggtgcggcagttaaaacaggatggagctccagatgtggat
gttactaaagctgtggctgaactgaaagcaaggaagagaaccctggaggccaaggagctg
tcattacaacccaaagatgacattgtagacagatcaaagatggaggataccctcaagaga
cggttcttttacgaccaggcttttgccatctatggaggtgtgagcggcctgtatgacttc
ggccccgtgggctgtgccctgaagaacaacatcctgcaggcctggaggcatcacttcatc
caggaggagcagattctggaaatagactgcaccatgctgaccccggagtccgtcctcaag
acatcaggacatgtggaaaaatttgctgactacatggtgaaagacgtcaaaaacggcgaa
tgcttcagggcagaccacctcctcaaagcccacctccagaagctgatgtctgataagaag
tgcacagcagagaagaaggccgagatggagcaggtcacaactcagatggacaactacacc
cagcaggagctgaccgatctctttgtgaaatacaacgtcaagtcgcccaccacaggaaac
gacctcacacctcccatctccttcaacctgatgtttcagacgtccatcggaccagggggg
aacatgccggggtacctgaggcctgaaacagctcagggaatcttcctcaacttcaaacgc
ctgttagagttcaaccagggaaaactgccctttgctgcagctcagataggaaactccttc
aggaacgagatctctcctcgctctgggctcattcgtgtcagagagttcaccatggcggag
attgagcactttgtggacccaaacgagaaggtccaccctaaattctcaaacgtagccgac
ctggacatcacgttatactcctccaaggctcagactagtggccagtctgcacacatcatg
aggctcggtgatgctgtggagcagggagtcatcaataactctgtcctgggatatttcatc
gggaggatctacctctacctcaccagagttggtatcgccaaagacaagctgcgcttccgt
cagcacatggacaacgagatggctcactacgcctgcgactgctgggacgccgaagccaaa
acctcctacggctggattgaaatcgtggggtgtgccgaccgctcgtgcttcgatctgcag
tgccacgcgcgggccacgaaggtccctctggtcgcagagaagcctctgaaagaacccaaa
gttgtcaatgtcgtccagtttgagccaaacaaaggagccttgggaaaggcgtacaagaag
gatgccaagatcgccatggagtatctgtctcagtgtgacgaggacttcatcgcagatcag
gagcggctgctcagtgagagcggagagttcaccatcgagtcggaaggcaagtccttcaaa
ctcaccaaggacatggtcgctgtgaagcgattccagaagaccctgcatgtggaggaagtg
gttcccaatgtgatcgagccctccttcggcatcggtaggatcatgtacaccatctttgag
cacacattccacgtcagagaaggtgacgagcaaagaacgtacttcagcttcccagccacc
gtgtctccctacaaatgttctgtcctgcctctgagtcaaaaccaggaattcatgcccttt
gtgagggagttatctgaggcgatgaccaaaaacggcgtgtcccacaaggtggacgactcc
gcgggatccatcggcagacgttacgccaggacggacgagatcggggtggcgttcggcatc
accatcgacttcgacacggtgaacaaggagccgcacaccgccacgctgagggaccgcgac
tccatgagacagatccgggccgaggtcagtgagttgccggtgatcgttcgggatttggcc
aacgccacattgacctgggccgaggtggagagcaagtaccccatctttgaaggacaggag
accagcaagaaggacacagtcgaagagtaa
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