Pungitius pungitius (ninespine stickleback): 119198746
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Entry
119198746 CDS
T07626
Symbol
shrprbck1r
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04217
Necroptosis
ppug04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119198746 (shrprbck1r)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119198746 (shrprbck1r)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119198746 (shrprbck1r)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
119198746 (shrprbck1r)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
119198746 (shrprbck1r)
Multi subunit type E3
LUBAC complex
119198746 (shrprbck1r)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
zf-RING_2
zf-RING_5
IBR_1
ubiquitin
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
119198746
NCBI-ProteinID:
XP_037312119
LinkDB
All DBs
Position
19:8316030..8325623
Genome browser
AA seq
710 aa
AA seq
DB search
MSLTSGGWTQTPGCAPLRSAALPATYGASGSLLGCQTVLMSVRVSVCHSGIRPLCLPGAG
DDSLRLQLSMDPGKSGEFRLTLQDSSGTGRSVTIAEFDLRTVKYEVKSAKCHELSLAAPP
HDRISFNFRCEQEAQEWATVVISALSEAHRVAPQDNDPQPPQQGLHPHSTLSLQQKEDTC
IELTRAIEAGDVQSASDFAATLARQCAALKIQPSAKDYEDTEINLAVAVEDSSSSCCVTV
KVSPHMTTAALKQQMFLEYGFHPRVQRWVIGQCLCTDQRSLASYGVRQDGDTAFLYLLSA
RHARLTFQVLQRDQESALLLGTPSLSLPRPPLAAASANGAPSTGQRPYATLPSRLHTSSN
TGGSERGNVHEIRDLINLEMPQLNKALTPKTASIQGWSCPSCTYINKPTRPGCEICSTDR
PDSYVIPGGYRPDALELRRIQQEKEAVRQYQQAREKERRENFARLVMMDGRDLLPNPESV
DCRICYVDLKPAEGVLLRECLHCFCRECLRSVIMLSEEPEVACPYRDDTYSCTCSLQERE
IRALVPAEEYERWLQRGLSVAESRCEGSYHCATPDCPGWCVYEDTVNVFPCPVCRKHNCL
ICKSIHEGMNCKQYQDDLAARAINDSAARRTTHLLKTLVQSGEAMHCPQCGIIVQKRDGC
DWLRCTVCHIEICWVTRGPRWGPTGPGDTSGGCRCNLNNQKCHPKCQNCH
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgacttcaggcggctggactcaaacccccgggtgcgcgcctttgcggtccgcc
gccctccccgctacctacggggcctcggggtcgctgctcggctgccagaccgtgctcatg
tcggtgcgggtgtcggtgtgccactccggtatccggccgctgtgtcttccgggagcgggc
gatgactcactgcgcctgcagctgagcatggacccgggaaagtccggggaattccggctg
acgctgcaggacagcagcgggaccggccggagcgtgaccattgctgagtttgatttgagg
acggtaaaatatgaggtgaagtcagcaaagtgccacgagctgagtttggcggcgcctcca
cacgaccgcatcagcttcaacttccgctgtgagcaggaggcccaggagtgggccaccgtg
gtgatttctgccctgagtgaagcacacagagttgctcctcaagataatgatccacagccc
ccccaacagggtctccatcctcatagcaccctgagcttgcaacaaaaagaggatacttgc
atagagttgacccgagccatagaagcaggagacgtgcagtctgcttctgactttgctgcc
acactcgcccgacaatgtgccgcactcaagattcagccgtctgccaaagactatgaagac
acagaaatcaacttggccgttgcggttgaggattcatcttcgtcctgttgtgtcactgtg
aaagtctccccgcatatgactaccgcagcactcaagcagcagatgtttcttgagtatggc
tttcacccacgggtgcagcgctgggtgattggccagtgtctgtgcaccgaccagcgctcc
ctggcttcatacggcgttcgtcaggacggggacacggccttcttgtacctcctgtcagcc
cgccatgctcgcttgaccttccaagtcctccagcgggaccaggagagtgccctcctcctc
ggcaccccgtccctgtctctccccaggccccccctcgccgcggcctctgcaaatggtgcc
ccgtccacgggccagaggccttacgccaccctgccttctagactccacacaagcagcaac
actggtgggtcagagagaggaaatgtccatgagatcagagatctcatcaacctggagatg
cctcaactcaacaaagcactgactcccaaaacagcctccatacagggttggtcgtgtcct
tcttgcacttacattaacaaaccaacacggccgggctgtgagatctgcagtaccgaccgc
ccggacagctacgtcatccctgggggataccgaccagatgcactggaactcagacggatc
caacaggagaaggaggctgtgaggcagtaccagcaggcaagggaaaaggagcgcagggag
aattttgcccggctagtgatgatggacggccgcgacctgctgcctaacccggagtccgtg
gactgtaggatctgctacgtggacctgaagcctgcagagggcgtcctcctgagggagtgc
ctccactgcttctgcagagagtgcttgcgctcagtcatcatgctgagtgaggagccggag
gtggcctgtccctacagagacgacacgtattcctgcacatgctccctgcaggagagggag
atcagggctttggtgccagcagaggagtatgagcgctggctgcaaagaggtctgtcagtg
gctgagtcgcgatgcgagggcagctaccactgcgccacccccgactgtccgggctggtgt
gtgtacgaggacacggtcaatgtcttcccctgccccgtctgcaggaaacacaactgcctg
atttgcaagtcgatccacgagggaatgaactgtaagcagtaccaggatgatcttgcagcc
cgagctataaatgactccgctgccaggaggacgacacatctactcaagactcttgtgcag
tcaggtgaggctatgcactgtccccagtgtggcatcattgtgcagaagagggatggatgc
gattggttgcgctgcactgtctgtcacattgagatctgctgggtaacgagaggaccccgc
tggggacctacgggtccaggagacaccagcggaggatgtcgctgcaacctcaacaatcag
aaatgccaccctaaatgccaaaactgccactga
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