Pungitius pungitius (ninespine stickleback): 119198784
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Entry
119198784 CDS
T07626
Name
(RefSeq) cadherin-20-like
KO
K06807
cadherin 20, type 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119198784
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Major cadherins
119198784
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
Mal_decarbox_Al
Motif
Other DBs
NCBI-GeneID:
119198784
NCBI-ProteinID:
XP_062415298
LinkDB
All DBs
Position
19:complement(1287302..1294673)
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AA seq
587 aa
AA seq
DB search
MDRETRENYTVVIQAKDMGGQLGGLAGTTTVNIRLSDVNDNPPTFDQRLYQMSIPEAAPV
GSVVGRIWAKDRDVGVNAEMEYSIIDGDGRDTFDISTDPTNLFGIVTVKRPLNFESKPSY
TLKVEGANTHLDPAFQHRVPFKDVTIVHVSVEDVDEPPLFDMPAYYVELSEDAEVGTVVT
AVTARDPDAANDTVRYSIEKSSDPDKFFYLEITSGSLMTVRSLDRERVGWHNITILAMEM
NNPTQISSASVAVRVLDVNDNPPSLTHYLEAYVCESAKAGQLIQTVTAVDPDQPLGGQHF
NYRLAPEAANNPNFTLRDNQDNTAWILTRRGGWSQQDQTVFYLPVVISDGEQPVQTSTST
LTVRVCSCDREGNVMSCNAEAHSLPASLSRGALIAILACIFVLLVMILLMLSLRTHRKKP
FLCDEEENVHENIVRYDDEGGGEEDTEAFDIGAMWNPREAHHRPPPRQPPHPGGKARQDM
LPEIESLSRYVPQACVAGGGVGEDSNVHGYVLAKLLDADSDTCAPPYDSLQTYAYEGEGS
VAESLSSLQSGASNADHEYDYLSEWGPRFKRLAEMYGALETNAAPVW
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacagggagaccagagagaactacaccgtggtcatccaggccaaggacatgggcggt
cagctgggggggctcgccggcaccaccaccgtcaacatcaggctgagcgacgtcaacgac
aacccgcccacctttgaccagaggctgtaccagatgagcatcccggaggcggcccccgtg
ggctccgtggtgggacgcatctgggccaaggaccgggacgtcggggtcaacgccgagatg
gagtacagcatcatcgacggggacgggagggacacgttcgacatcagcaccgacccgacc
aacctcttcggcatcgtcacggtgaaaaggccgctcaactttgagagcaagcccagttac
actcttaaagtggagggcgccaacacccacctggacccggccttccagcaccgcgtgccc
ttcaaggacgtgaccatcgtgcacgtgagcgtggaggacgtggacgagccgccgctcttc
gacatgccggcgtactacgtggagctctccgaggacgccgaggtcggcaccgtggtgacg
gcggtgacggcgagggaccccgacgccgccaacgacaccgtcaggtactccatcgagaag
tccagcgaccccgacaagttcttctacctggagatcacctccgggtcgctgatgacggtg
cgctcgctggaccgagagcgggtcggctggcacaacatcaccatcctcgccatggagatg
aataaccccacgcagatctccagcgcctcggtggccgtgagggtcctcgacgtgaacgac
aaccctccctccctgacgcactacctggaggcctacgtgtgcgagagcgccaaagcggga
cagctgatccagacggtgacggccgtggacccagaccagccgctgggtggacaacacttc
aactaccgcctggctccagaggccgccaacaaccccaacttcaccctgagggacaaccaa
gacaacacggcgtggatcctgacgcggcgagggggctggtcccagcaggatcagaccgtg
ttctacctgcccgtggtcatctcggacggcgagcagccggtgcagacgagcaccagcacg
ctgaccgtgcgcgtgtgcagctgcgaccgcgagggcaacgtcatgtcgtgcaacgccgag
gcgcacagcctgcccgccagcctcagccggggggcgctcatcgccatcctggcctgcatc
ttcgtgctgctcgtgatgatcctgctcatgctctccctgcggacccaccgcaagaagccc
ttcctgtgcgacgaggaggagaacgtgcacgagaacatcgtgcgctacgacgacgagggc
ggcggcgaggaggacaccgaggccttcgacatcggcgccatgtggaacccgcgcgaggcg
caccaccgaccccccccccgccagcccccccacccggggggcaaggcgaggcaggacatg
ctgccggagatcgagagcctgtcgcgctacgtcccgcaggcgtgcgtggcgggcggcggc
gtcggcgaggacagcaacgtgcacggctacgtgctggcgaagctcctggacgccgactcc
gacacgtgcgcccccccctacgactccctgcagacctacgcctacgagggggagggctcg
gtggccgagtcgctcagctcgctgcagtcgggggcgtccaacgccgaccacgagtacgac
tacctcagcgagtgggggcctcgcttcaaaaggctggcggagatgtacggcgcgctggag
accaacgccgcccccgtgtggtag
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