Pungitius pungitius (ninespine stickleback): 119198811
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Entry
119198811 CDS
T07626
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119198811 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119198811 (u2surp)
Spliceosome [BR:
ppug03041
]
Complex A
U2 snRNP components
U2 related factors
119198811 (u2surp)
Complex B
119198811 (u2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
119198811
NCBI-ProteinID:
XP_037312229
LinkDB
All DBs
Position
19:complement(4806527..4815968)
Genome browser
AA seq
973 aa
AA seq
DB search
MADRTPGGTQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDEIKKKEDERAAAEIYEE
FLAAFEGGGEGKVKAFVRGGIANATKEEAAADEKKGKLYKPKSRFDNQSKSFLPLDTPPQ
FLPVDKRHSVKKPTEKEKKKSNLELFKEELKQIQEERDERHKLKGRVSRFEPLSGADGRR
SSDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASV
KIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPHPI
YIPPSMMEHTLPPPPSGLPFNAQPRERLKNPTAPMLPPPKNKEEFEKTLSQAIVKVVIPT
ERNLLSLIHRMIEFVVREGPMFEAMIMNREINNAMYRFLFENQSPAHVYYRWKLYSILQG
EAPVKWKTEDFRMFKNGSLWRPPPLNPYLHGPYDDGEEEEEDEDGVRKGSLKEDERDKLE
EMLRALTPRRGDIAEAMLFCLNRAEAAEEIVECVTESLSILKTPLPKKIARLYLVSDVLY
NSSAKVSNASYYRKYFETKLCQIFADLNATYKAIQGHLQSENFKQRVMACFRAWEDWAVY
PDPFLIKLQNIFLGLVNLAAEKEAPVVIVEADPVEDIDGAPIGEYVDGALLEDVDGVPID
AVPIDGAPIDGAPLDDLDGVPIKHMEEDIDGIPLDPSKEATFKVAPSKWEAVDEAELQAQ
AVTTSKWEAIEQTEERKKDEDDSDYDDRSPRSDDNHSYSNPIREDSDIKAKMSEMNEEKR
TKLREIEVKVMKFQDELESGKRPKKPGQSLQEQVEHYRDKLLQKEKEKEKLEREKEREKK
EKEKAEARLKDLKKEKEKDDTPTRKERKRRHSGSPSPSRSSTRRGRSPSPRSERSERSER
SDRSYSKDTSSRSAHKDSPRPSSKKSSKRSPSPRTPKRSRRSRSKTPKKSAKKSRSKSRS
PHRSHKKSKKSKH
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgaacgcctggtggcactcaaaaagctagcgctaaggcgttgcttgagagc
aaattgaagtctttcagtattggcaaaatggcagtggcaaagaggaccctgagtaagaag
gaacaagatgaaataaagaaaaaagaagatgagcgggctgcagccgaaatttatgaagag
tttcttgctgcttttgaaggaggaggagagggcaaggtcaaggcctttgtccgtggtggt
attgcaaatgcaacaaaagaggaggcagctgctgatgagaagaaaggaaaattgtacaag
cccaagtcacgtttcgataaccagtcaaaaagcttcctgcctttggataccccgcctcag
tttttaccagtagataaaagacattctgtgaagaaacctactgaaaaggaaaagaagaag
agcaacttggagcttttcaaagaagaacttaaacaaatacaagaggaaagggatgaaaga
cacaagctgaagggacgcgttagtcgcttcgaacctctctcgggcgccgatggaagacgc
tcgtcggatggttcttcaagaagaaaccgtccgtccagtgttttggatgattgtgcgcca
ggttcccatgatgttggagacccatccactactaacttgtatcttggaaacatcaatcca
cagatgaatgaggagatgctgtgtcaagagtttggccgttatggtccgctggccagcgtg
aagatcatgtggcccagaacagacgaggagagggctcgggagaggaactgtggttttgtg
gctttcatgaacaggagggatgccgagcgagctctcaagaacctaaatggaaagatgata
atgaactttgagatgaaattaggatggggcaaaggtgtgcccatcccaccccacccaatc
tacatccctccttccatgatggagcacacactcccaccacctccctccggcctacccttc
aatgcacagccccgggagaggttaaagaaccccactgccccaatgctccctccacctaaa
aacaaggaggagttcgagaagactctgtcgcaagccatagtcaaagtggttatcccaaca
gaaaggaatttgctctctctcatccaccgaatgatcgagtttgtggtgcgtgaaggccca
atgtttgaagccatgatcatgaacagagaaatcaacaatgccatgtacaggtttctattt
gagaaccaaagcccggcacatgtttactaccggtggaagctgtactccatactacagggg
gaagcaccagtcaaatggaaaacggaggactttaggatgtttaagaatggctccctgtgg
cgtccgcctcctctcaatccgtacctccacggtccgtatgatgacggtgaggaagaggag
gaagacgaggacggcgtcaggaaaggcagcttaaaagaagacgagcgagacaaactagag
gagatgctgcgtgctttgactcccaggaggggagacattgcagaggccatgttgttttgt
ctcaaccgagccgaagcggccgaagagatagtggaatgtgtcacggagtctctctccatc
ctcaaaacccctcttcccaagaagatcgcacggttatatctagtttctgatgtgttgtac
aactcttctgccaaagtatccaatgcgtcgtactacagaaaatattttgaaaccaagcta
tgccagatctttgcagacctcaacgcgacgtacaaagcgatacagggccacctgcagagt
gagaactttaagcaacgagtgatggcgtgtttccgggcgtgggaggactgggccgtgtac
ccggaccccttcctgatcaagctgcagaacatcttcctgggtctagttaatctcgctgca
gagaaggaagcccccgttgtcattgtggaggccgatccggtggaggacattgatggggct
ccaatcggggagtacgtagatggggctctgctggaggatgtggacggggtgccgatcgac
gcagtgcccattgacggagcccctattgacggagcccccctggatgacctcgacggggtc
cccatcaagcacatggaagaagacatagatggaatacctttggatccgtccaaagaggca
accttcaaggtagcaccctcgaaatgggaggcggtggacgaggcggaattacaagctcaa
gctgtgacaacttctaaatgggaggcaattgagcaaacagaagaaaggaaaaaggacgag
gatgacagtgattatgatgacaggagccctcgctcagatgataatcacagctactcaaac
cccatcagagaggactctgatattaaggccaaaatgtctgaaatgaatgaagagaaacgc
acaaagctcagagaaatcgaggttaaggtcatgaagttccaggatgagcttgagtctggg
aaaaggcccaagaagcctgggcagagtcttcaggagcaggtggaacattacagggacaaa
ttactacaaaaggaaaaggaaaaagagaaacttgaacgtgagaaagagagggagaagaaa
gagaaggagaaggctgaggcacgtttgaaggacttgaagaaggaaaaagaaaaggatgac
acaccaaccaggaaggagaggaaacggcgtcacagtggttcacccagcccatcgaggagt
agcacccgacgaggccggtcgccttcaccccgttccgagcggtcagaaagatcagagcgc
tccgaccgctcgtactctaaagacacgtcctcacgctccgcccacaaagactcgccgcga
cccagcagcaaaaagtcgtcaaagagatctccctctcctcgtacacccaaacgatcgagg
cggtcgcgctcaaagacgcccaagaaatcagcgaagaaatcccgctccaaatcaaggtct
cctcaccggtcgcataaaaaatcaaagaagagcaaacactga
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