Pungitius pungitius (ninespine stickleback): 119198931
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Entry
119198931 CDS
T07626
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119198931
03037 Cilium and associated proteins [BR:
ppug03037
]
119198931
Transporters [BR:
ppug02000
]
Other transporters
Pores ion channels [TC:
1
]
119198931
Cilium and associated proteins [BR:
ppug03037
]
Other cilia and associated proteins
Stereociliary proteins
119198931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF6524
Orf78
Motif
Other DBs
NCBI-GeneID:
119198931
NCBI-ProteinID:
XP_037312443
LinkDB
All DBs
Position
4:complement(4388718..4435645)
Genome browser
AA seq
1138 aa
AA seq
DB search
MSTVSEPSAGSIRSLSAAKRHKSIRKNSRRIYSAYQDHQQGSSDEDDKEDERVESNDPEE
MFQNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQTAGADLLKKL
SRVLYNILVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELL
AGAPFGTTRSKTIPKEHQASAQDLDTIWSLGGYLQYSVLFYGYYGRLRKIGSAGYRLPLA
YFLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKG
AAIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQ
EKPELTLWEKNEVSVVVSLITMIAPSAFELVSQLEMYHPRTSLRFQLARVLVLYLGNLYS
LIIALLDKVNSMSSSDPVSPGNWSDSSSFLATISQPEVDSLSTLVSEISVSEHRNSTIAT
IATLLDVRVTMPSSSGTISNQTALFEKNTRSQQDQCWETYVGQEMLKLSIIDMIFTVASI
LLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPA
FNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTVFAIVRYR
PSQHCGPFSGQEKIYDIISETVANDFPLWFSKVMSYVTSPVVVLPGLLLLFMLIYYLQAI
ARSLKFTNNQLRMQLQTERTDDKKKVLQMVAARLQAPEAAADKKADQQESDITSQEASIH
TASLRRNGSVTNFTFPVRHGNSIDTITQSASRTDLNRGSVVGSVTSPTVTMLPRHRPEHI
PSRKAIRSIHPVEAAGIVTAQTYGGRRGLTTRYVIVNEHEPRKKLLRSSTRIPCHYLLEE
PAEVLEVYPRNIKRYTPRSAHHQPFAHRSHPSQQHLSEEEEEEEEGKGRRRVASGKAHRP
RPRFDLHQPPHLYIGGRVEGHVSVVKGGHSRARERYGEQGDDEEEDGEGEMDCGDVESNF
QAEVSVRGADSLLVRTRRPIHSPGRHRQSPARTRHTESFVKPKMRAKLETPLTESDSASV
ASSSDQQNSSSDQYIQVLHNKEPHLKADARQEKLAKKKFKTSLDLNVIDSNDLVCTNV
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgtgtctgagccttcagctggcagcatcaggtctctgtctgcagccaagagg
cacaaaagcatcaggaagaactccagaaggatttattcagcctaccaggaccaccagcaa
ggctcctcagatgaagacgataaagaggatgagcgagtggaaagtaatgacccagaggag
atgttccagaacattcaatatcagaaggagatcatcgccaacattcggaccagaccctgg
ccaatgagacgcaagctcaaagttctaaagcaggccagagagattgttctgaagtatgaa
ggccgtctcaccagaaccagaggctaccagactgcaggagctgatctgctgaagaaactt
tcacgtgtgctttacaacattctggttctgttcattccctgggaggtgaggatcaagaaa
attgaaagtcactttgggtcgggcgtggcctcctacttcatcttcctccgatggttgttt
gggatcaacatcgtcctcacgatcatgactggagcctttatcgtcctaccagagctgctg
gcaggagctccgtttgggacaacgaggagtaaaaccatccccaaggagcatcaggcttca
gcccaggacttggacaccatctggtctctcgggggctacctgcagtactccgtattattc
tatggttactatggcagactgaggaaaattggcagtgcagggtaccggttgccccttgcc
tacttcctggttgggatggctgtctttgcctacagtttcatcatccttttaagaaaaatg
gccaagaactctcgtctgagcctggccagtgcctccgatgagaactttacgttctgttgg
agagttttctgtgcctgggattacctgataggaaacccagaggctgcagagagcaaagga
gctgccattgtcaacaacatcagggaagccatcgttgaggagcaggaaaagaagaaggac
accagtctggcagttctcatcagtctgcgtattttagccaacatcctggtgctgctgtct
ctggctggcagcatctacatcatctactttgtggtggaccgttctcagaaactagagcag
gagaagccggagctgacactttgggagaagaatgaggtgagtgttgtggtttctctcatc
accatgattgctccttctgcctttgagcttgtttctcagctggagatgtaccacccacga
acctccctgcgtttccagctggccagagtacttgttttatacctggggaatctctacagc
ctcattattgccctccttgataaggtcaacagtatgagctcttctgacccagtgagtcca
ggtaactggtctgactccagctccttcctggccacaatctctcagccagaggtagacagc
ctctccaccctggtttctgagatctctgtctcggagcatcgcaacagcaccatagcaaca
attgccacattgctggatgttagggttaccatgccaagcagttcagggaccatctccaac
cagacagctctgtttgagaagaacacccgctctcagcaggaccaatgctgggagacctac
gttggacaggagatgctgaagctatccatcatcgacatgatctttacggtggccagcatc
ctactcattgacttcatcagaggcttggtggtccgctacctaagtgactgctgctgctgg
gatttagagagcaagtttcctgaatatggagaattcaaaatagcagagaatgttttgcat
ctgatttataaccaaggaatgatctggatgggagcatttttctctccctgtcttcctgcc
ttcaacgtgttgaagctgattggtctcatgtacctgaggagctgggccgtcctcacgtgt
aatgttccccaccagcaggtgttccgggcctcaagatcaaacaatttctacttggctatg
cttcttttcatgctgtttctgtgtatgctgcccaccgtctttgccatagtgagatataga
ccgtcacagcactgtggaccattcagtggccaagagaagatatatgacatcatctctgag
acggtggccaatgacttccccctgtggttcagtaaagtaatgagttacgtcactagccct
gtcgtggtgctgccaggcctgctgctgctgttcatgctgatatactatctccaggccatt
gccagatccctcaaatttaccaacaaccagctgaggatgcagctccagacagagcggaca
gatgacaagaagaaagtcctccagatggttgcagcgagattacaggctccagaggctgca
gctgacaaaaaggcggatcagcaggaaagtgacatcacgagccaggaggcctctatccac
actgcatctctcagacggaacggcagcgttacaaactttacttttcctgttcgtcatgga
aacagcatcgacactatcacacaatcagcttctaggacggacctgaacagaggaagtgtg
gttggatcagtcacaagtccgacggtgaccatgctgcccagacacaggccggaacacata
cccagcaggaaggcaatacgctccatacatccagtagaggctgccgggatcgtcactgca
cagacatatggaggaaggcgcggtctcaccacccgctatgtaattgtcaatgagcacgag
ccccggaagaagctgctccgctcctccacacggatcccatgccattacctcttggaggag
cctgcagaggtccttgaggtgtacccacgcaacatcaaacgctacacgccccgcagcgct
caccaccaaccatttgctcaccggtcccacccatcgcagcagcatctgagtgaggaggaa
gaggaggaggaagagggaaaaggcaggagaagggtggcgtcagggaaggctcatcggccc
cgcccccgctttgaccttcaccagccgccacacctgtacatcgggggccgtgtggagggc
cacgtgtccgtggtgaaaggcggccacagtcgagctcgagaaagatatggagagcaagga
gacgatgaagaggaggatggtgaaggagaaatggattgtggagatgtcgagtcgaacttt
caggccgaggtcagcgtgagaggagccgactcgctccttgtccgaaccaggcgtcccatc
cattcgccaggaagacaccgtcagtccccggccaggaccaggcacacggagtcttttgtg
aagcccaagatgagagcaaagctggagacccctttgaccgagtcagactcagcctcggtg
gcctccagcagcgaccagcagaacagcagcagtgaccagtatattcaggtcctccacaac
aaggagccccatctcaaggcggatgccaggcaagagaagctggccaaaaagaaattcaaa
accagcttggatttaaatgttattgattcaaatgatcttgtctgcaccaatgtatga
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