KEGG   Pungitius pungitius (ninespine stickleback): 119198962
Entry
119198962         CDS       T07626                                 
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ppug03036]
    119198962 (wdhd1)
Chromosome and associated proteins [BR:ppug03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    119198962 (wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Ctf4_C WD40 WD40_Prp19 WD40_CDC20-Fz HMG_WDHD1 Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WDR55 EIF3I Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd HMG_box WDR90_beta-prop_4th eIF2A Beta-prop_EML Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_WDR75_2nd HMG_box_2 DUF6476
Other DBs
NCBI-GeneID: 119198962
NCBI-ProteinID: XP_037312494
LinkDB
Position
4:25460767..25470636
AA seq 1115 aa
MPCERKPMRYGHSEGHTEVCFDHSGRFLVTGGNDGDVRIWEGLDDDDPKFITVGDKVYSL
ALKNGKLVTASSNNTVQIHTFPGGDPDGILTRFTTNATHVTFNSSGSRVAAGSSDFMVKV
VEVSDSSQQKTLRGHEAPVLSVTFDPKDDFLASASCDGSVVVWSIEDQSQLIRWPLLQKT
NDVSNAKSLCRLAWQPVGAKLLAVPVETKVHLYERGSWDHVSTLSDDLQTQLINVVAWSP
CGRFLAAGGVGGSLTVWDVNSKLCVERQKHEKGHTVCSLAWSPSGSQVAYTDTEGRLGLL
DGLSTSSSSSSSSKPSKKAAETYDDLFDDDDDRLMDEGLSEHNSPVKKPVAVDDDEDDDL
MPATGRPRNRGAILDDELSLDAGSLKLGRDKFGGDEDGDDASSAVMAAAPPPGPLRPVYE
GPLPTPPQKAFQPGSTPAHLTHRFMMWNSVGIARGYNDDQDNAIDVEFHDTAVHHAMHLA
NSLGHTMADLSQEAVLLACPGTEELASKLQCLHFSSWDTNKDWMVDLPAGEEARALCLGG
GWAAVATSALMLRLFSVGGVQREVFSLQGNVVCMAGHGEQLLIVYHRAPGFDGDQALGVQ
LLQLGPRKSQLIRGEALPLSRRAHLTWLGFTAEGTPCYVDSEGSVRMLNRSLGNTWTPVC
NTGETCKSRSDHYWVVGVHENPQQLRCIPCKGSRYPPTLPRPAVAILPFKLPMCQTSTEK
GLMEEQFWRSVLFENHFGFLSSSGYEVDEEAQTRSQKEQQELLMKMFALSCKLEREFRCV
ELAELMTHNAVTLAIRYASRSRRMGLAQRLSEVALEKANRLREEEPEEEAEHAARRASGY
EVTGGRQGNRPNHKEQVEQVEQVEQVQGPQEEEEPETRECVNPFAKEATSPVVPSLTPLG
KSGRANPFKVSSSSSSSSAAQPRGTNILDNMASGRKSSPLAGSAGKASKGPVLKPLPPRP
RSKTQSTLLQMTSSKKKTQEITQKQPEAPPPASPADSGDNDRPKTGFQLWLEENRKSISA
DHPELEETEVIKEAMGRFRTLSAEERLSWTERAKSQTGDAADLKKRKRGGGGGDEEGAAG
GDDEHGPVEADENSAKKKRSLDPSAKLSAFAFNKN
NT seq 3348 nt   +upstreamnt  +downstreamnt
atgccttgtgagaggaagccgatgcgctacgggcactcggagggacacaccgaggtctgc
ttcgatcactctgggaggttcttggtgaccggcgggaacgacggagatgttcgcatctgg
gagggtctggatgacgacgatcccaagttcatcaccgtgggggacaaggtgtactctctg
gcgctcaagaacggcaagctggtgacggcgagctccaacaacacggtgcagatccacacg
ttccccgggggcgacccggacggcatcctgacccggttcaccaccaacgccacgcacgtc
accttcaacagcagcggctccagggtcgctgccggctccagtgacttcatggtgaaggtg
gtggaggtgtcagacagcagccagcagaaaacgctgcgaggccacgaagcgcctgtcctc
agtgtgacctttgaccccaaagacgacttcctggcctccgccagctgcgacggctccgtg
gtggtttggagcatcgaggatcagtcccagctgatccgctggcctctgctgcagaagacc
aacgacgtcagcaacgccaagtctctgtgtcggctcgcctggcagcccgtgggggcaaag
ttgttagcggttcccgtggagacgaaggtgcacctgtacgagcgaggctcctgggatcac
gtgagcacgctgtccgatgatctgcagacgcagctcatcaacgtggtggcctggtctccg
tgtggccggttcctggcggcgggcggcgtgggcggctcgctgacggtgtgggacgtgaac
agcaagctctgcgtggaaaggcagaagcacgagaagggccacacggtgtgcagtctggcc
tggagtccttcaggcagccaggtggcctacaccgacacagagggccgcctgggtctgctg
gacggactcagcacctcctcctcctcctcctcctcctccaagccgtctaagaaagcggcc
gaaacctacgacgacctttttgacgatgacgatgaccggctcatggacgaaggcctcagc
gaacacaactcgccggtcaagaaacccgtcgccgtggacgacgatgaagacgatgacctg
atgccggcgacggggcggccgaggaaccgcggggcgatcctggacgacgagctctcgctg
gacgccggctcgctgaagttgggtcgggacaaatttggaggcgacgaagacggggacgac
gccagcagcgccgtcatggcggccgcccccccgcctgggccccttcgccccgtctacgag
gggcccctgccgacgcccccgcagaaggccttccagccgggctccacgccggctcacctc
acgcaccgcttcatgatgtggaactcggtgggaatcgctcgcggctacaacgacgatcag
gacaacgccatcgacgtggagttccacgacacggccgtgcaccacgccatgcacctcgcc
aactcgctgggtcacaccatggccgacctttcccaggaggccgtgctcctggcctgcccc
ggcacggaggagctcgccagcaagctgcagtgcctccacttctcctcctgggacaccaac
aaggactggatggtggacctgccggcgggcgaggaggcgcgggcgctgtgcctcgggggg
ggctgggcggcggtcgccaccagcgccctgatgctccgcctcttctccgtggggggggtc
cagagggaagtcttcagcctgcaggggaacgtggtctgcatggcggggcacggggagcag
ctgctcatcgtctaccaccgggcccccggcttcgacggggatcaggctctgggggtccag
ctgctgcagctggggcccaggaagagtcagctgatccgcggggaggcgctgcctctgtcc
cgccgggcccacctgacgtggctcgggttcaccgccgagggcaccccgtgctacgtggac
tcggaggggtcggtccggatgctgaaccggtccctcggcaacacctggacacccgtgtgc
aacaccggggaaacgtgcaaaagccggtcagaccactactgggtggtgggggtccacgag
aacccccagcagctcaggtgcatcccctgcaaaggctccaggtacccccccacgctgccc
aggccagctgtggccatcctgcccttcaagctgcccatgtgtcagacctccacggagaag
ggactgatggaggagcagttctggcgctccgtcctcttcgagaaccactttgggttcctg
tcgtccagcggctacgaggtggacgaggaggctcagactcgctcccagaaggagcagcag
gagctgctgatgaagatgtttgcactctcctgtaagctggagagggagttccgctgcgtg
gagctggcggagctcatgacccacaacgcggtgaccctggccatccgctacgcctcgcgc
tcccgccgcatgggcctcgcccagcgcctcagcgaggtcgccctggagaaggccaaccgc
ctccgggaggaagagccggaagaagaggcggagcacgctgccagacgggcttctgggtac
gaggtcacaggaggtcgccaaggcaacagacctaaccacaaggagcaggtggagcaggtg
gagcaggtggagcaagtacaggggccccaggaggaggaagaaccagaaaccagagaatgt
gtcaatccgttcgctaaagaagccacttcacctgtggttccttctctgacaccactcggt
aaatccggacgagcaaatcccttcaaggtctcctcctcctcctcctcctcctcggcggcg
cagcctcgcgggaccaacatcctggacaacatggcgtccggcaggaagtcgtctccgctc
gccggctctgcagggaaagcaagcaaaggccccgtcctcaaaccgctgcccccccgaccc
agaagcaagactcagtccactctgctgcagatgaccagctccaagaagaagacccaggag
atcacgcagaagcaacctgaagctccgcctccagcgtcgcctgctgacagcggcgacaac
gacaggcccaagacgggcttccagctgtggctggaggagaacaggaagagcatcagcgcc
gaccaccccgagctggaggagacggaggtcatcaaggaggccatggggcgcttcaggacg
ctgtctgcagaggagcgactgtcgtggacggaaagagcaaaaagccaaacgggagacgca
gcggacctgaagaagaggaagagaggaggaggaggaggtgatgaagaaggagcggccgga
ggagatgacgaacatggaccggtggaagcagatgaaaatagtgccaagaagaagagatct
ttggatccctccgccaagctttcagcgtttgcttttaacaaaaactga

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