Pungitius pungitius (ninespine stickleback): 119199665
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Entry
119199665 CDS
T07626
Symbol
irx6a
Name
(RefSeq) Iroquois homeobox protein 6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119199665 (irx6a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119199665 (irx6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
119199665
NCBI-ProteinID:
XP_037312860
LinkDB
All DBs
Position
4:complement(19278403..19284101)
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AA seq
510 aa
AA seq
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MVTKEAAMSFSQFGYPYNASSQFFVSANPSTTCCDSISRSVSDGTGGSQTAAAAAAAAAA
AAASFCCPSYENRLLASSRTELNAALGMYGSPYAAAAAASQNYANYFPYSTDPSAIYSTL
NPQYDIKDSTGTLHSGITQTAAYYPYDHSLGQYQYDRYGTVDFNGTARRKNATRETTSTL
KTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKANDD
RKDDFNKSDQDGVTKDSSDCKEEKDLHLSDLEDMDDDDCDKLDSDCEKAAADEQALHRVM
AVSGAPQKRDCGSELHLSLTNSFHTFPCTLKSVASLSPLPSDFLDPAVSKAPSSTGPAGT
VSLSHFEGSDKPRIWSLARTAASGVILSHQQHGSELRTGNSTGDCQLQGPSITGQCGGIR
GLHESSVPSAENPFPDGLSLHSKVYGTGSYIHKDLQLHCPSYAALPDACQYSTIEGFSGG
KEEAQSSDLREACGIVQDDKVTAFRPVMKR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagcagctatgtctttctcgcaatttggatacccttacaatgcatct
tcacagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtctctgatgggacaggcggctcccagaccgccgccgccgccgctgccgccgccgccgcc
gccgccgcctccttctgctgcccgtcctacgagaaccgactcctggcgagcagccggacg
gagctgaacgcggcgctggggatgtacggctcgccatacgccgcggcggctgccgccagc
cagaactacgccaactacttcccctacagcaccgacccatccgctatctactccactctg
aatccacagtatgacatcaaggacagcacaggcactttacactccggcatcactcaaacc
gctgcatactatccttacgaccattcactgggacagtatcaatacgacagatacggcaca
gtagactttaacggcacagccaggagaaagaacgcaactcgtgaaaccaccagcaccctc
aaaacatggttgtatgagcaccgcaagaacccctaccccaccaagggagagaagatcatg
ctggccatcatcacaaaaatgaccctcacccaggtgtccacctggttcgccaacgccagg
aggagactaaagaaggagaacaagatgacctggtcgccaaagaataaggccaacgacgac
aggaaggatgactttaacaagagcgaccaagacggcgtcaccaaagactctagtgattgc
aaggaggagaaggatctgcatctaagtgatctggaggacatggacgacgacgactgtgac
aagttggacagtgactgtgaaaaggcggctgcagacgagcaggccctccacagggtcatg
gcagtatccggagcacctcaaaagagagactgcggctctgagctgcacctgagtttaacc
aacagcttccacacattcccctgcactctcaaaagtgtcgccagcctctcccctctcccg
tccgacttcctggaccccgcggtgtccaaggcaccgtcttcgaccggccccgcgggaact
gtgtccctgtctcacttcgagggatcagacaagcctcggatttggtctctggctcgcacg
gcggcttcgggggtcatactgagccatcagcagcacggctcggagctcaggacaggcaac
tcaaccggggactgccagctccagggccccagcattactggacagtgtgggggcatcaga
ggcctccatgaatccagtgtccccagtgctgagaacccattccccgatggcctatccttg
cactcaaaagtctatggcaccggcagctacattcacaaggacctccaactgcactgcccg
tcctacgctgcccttccagacgcatgtcagtactccactattgaaggattctctggtggc
aaagaagaggcacagtcatctgacctcagagaagcctgcgggatcgtgcaggatgacaag
gtcacagcgttcagaccagtgatgaagaggtga
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