Pungitius pungitius (ninespine stickleback): 119203556
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Entry
119203556 CDS
T07626
Name
(RefSeq) inner ear-specific collagen
KO
K24214
otolin-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119203556
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
119203556
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
119203556
NCBI-ProteinID:
XP_037313081
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All DBs
Position
15:complement(11692727..11697579)
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AA seq
500 aa
AA seq
DB search
MPSVRLVFLTTLLVVQMATLASSTRTTRMPKPQTTKKPPRAGGSGGAGGGGGFGRATTTT
TPSPSSSLQMDETTDVTMDTYSASPTDSTTYSDTFSTEFHTDAIVPPGNAVGNYTLNFNE
CFFNVCECCPPGMGPAGPMGDSGPPGPQGERGPLGLPGERGETGPRGVPGPAGLPGANGL
NGDTGEKGDLGPMGLPGAPGISGKPGERGDQGPRGEKGERGFSGLKGDPGERGEPGLNGS
QGDTGREGPIGPPGVAGTKGQKGEQGLSGECSPSEKSNVAERGPPGLRGEMGPPGVNGTD
GAKGERGQPGPAGAKGDTGTRGPPGLPGGRGLVGLRGEKGAKGGRGPRGPKGPPGESVEQ
IRSAFSVGLFPSRSFPPPGLPVKFDKVFYNGEGHWDPTINKFNATYPGVYLFSYHITVRN
RPVRAALVVNGIRKLRTRDSLYGQDIDQASNLALMQLNEGDQVWLETLRDWNGVYSSSED
DSTFSGFLLYPDPKDKPTDM
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgttcgcctggtcttcctgaccacgctccttgtggtacagatggccacgctg
gcctccagcaccagaaccacacgaatgcccaaacctcagaccaccaagaagccccctcga
gctggtggcagcggcggcgcaggtgggggtggaggattcggacgagccaccaccaccacg
accccatctccttctagcagcctgcagatggatgagacaactgacgttacaatggacact
tactcagcgtcccctacagacagcaccacctacagcgacactttctccaccgagttccac
accgatgccatagtgcctcccgggaacgccgttggaaactatactctcaacttcaatgag
tgcttcttcaacgtctgtgagtgctgtccgccagggatgggccccgcagggcccatggga
gacagtggcccaccagggccacaaggagagaggggccctttagggttaccaggagagagg
ggagaaacagggccccggggagtcccaggaccagcaggactacctggtgccaacgggctt
aatggtgacacaggtgaaaaaggtgatctaggaccgatgggtcttcctggtgctcctggc
atctcaggaaaaccaggagagagaggtgatcagggccccagaggagagaaaggtgaacgt
ggtttcagcggtctgaaaggtgacccaggagaaagaggagagcctggcctgaatgggtct
cagggcgacactgggcgagaggggcctataggtccccccggggtagctgggacaaagggt
cagaaaggtgaacaaggacttagtggcgagtgttcgccaagcgagaaaagtaatgtggcg
gagcgtgggcccccaggcctgagaggtgagatgggccccccgggagtgaatggaactgat
ggtgcaaagggagagagaggccagccagggcctgcgggcgcaaagggcgataccggtacc
agagggccaccaggacttccaggaggaaggggcttggtaggcctgaggggggagaaggga
gctaagggcgggcgtgggccccggggcccaaaaggcccaccgggtgagagtgtggaacag
attcgctctgccttcagtgtgggcctgtttcccagcaggtccttccctccgcccggcctg
cctgtgaagtttgacaaggtgttttataacggggagggtcactgggacccaaccatcaac
aagttcaacgccacctacccgggggtctacctattcagctaccacatcaccgtgcgcaac
aggccagtgcgtgccgccctagtggttaatgggatacggaagctgcgaacccgggattcc
ctctacggccaggacattgatcaggcgtccaacctcgcgctgatgcagctgaatgaaggc
gaccaggtgtggctggagacgctgagggactggaacggagtctactccagcagtgaggac
gacagcactttctctggcttcctgctttacccggaccccaaggacaagcctactgatatg
tga
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