Pungitius pungitius (ninespine stickleback): 119205091
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Entry
119205091 CDS
T07626
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
ppug04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119205091
04020 Calcium signaling pathway
119205091
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119205091
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119205091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
DUF2755
Motif
Other DBs
NCBI-GeneID:
119205091
NCBI-ProteinID:
XP_062413828
LinkDB
All DBs
Position
15:3545233..3580408
Genome browser
AA seq
2150 aa
AA seq
DB search
MLTSSDQSLSRSLSPGPLSPSGSGPAGRMHAQSSLSLPEPEPWRTSGASPRHGLAQAARS
SSLQVPHALPECLGLPPRAASFDVPCAQDDASSDQGSGSLSPHGMQRRRGGLVEQKDIIM
AHQAHKIQSTPQARRKEWEMARFGDEFAPGAVDSGDGDAERGGEEQDAAAVAAGLTASIR
QAKAQRARTMAMYNPVPHRQNCLTVNRALFIFAEDNIMRRAARRIIEWPPFEYMILATIT
ANCVVLALEQHLPGEDKTPMAKRLEKTEPYFIGIFCFEAAIKLLALGFVFHKGSYLRNGW
NVMDFIVVLSGILATAGAHMNIPVDLRTLRACASAATSQARLRHPKDEKYTDTSTASMSR
SRMNFRSGRRGPAAYLRRKERMLRISIRRMVKTDTFYLMVLSLVALNTVCVAIVHHNQPD
WLTIFLYYAEFVFLGLFLAEMFLKMYGLGFRLYFHSSFNCFDCGVIVGSIFEVVWGFFRP
GMSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGM
QLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIRSQGGVQYGMWSSIYF
IVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEEEEFFNQRYARGRDGLISDGRRRPY
LYRKRAIHRGRPNFPEEPEERAGAPDEQPLKGPNAFVTRRERRRKVHMSVWEQRANQLRK
RRQMASREELVASAAAEDAAETPGVPLEAAPAHPPGSPASAGTPLPEEDVSVAIAIPEPP
AAEPLVSLGEEKAAVGPNHRAAGGGRHRMARRFRPGQDDGARHRRHRHRDARAEAKSLDC
GSQAAREEPHARLSRSQERKTLDEGEEKDEREEKAEADGGSVQDDGATCIINPYAEDGED
ARREIPDPSRCELDPAGSEQGEGAATDQAAPEEPASEAGEFAAGPGEPVSRPASVKRGDK
ARPAGSVAIEMSAQPLLELTPMTGNSKESEVYSSEQTDRDEETGDEEREPSVPPKPAAPD
SMFIFKASNPIRKICHYVVTMRYFEMSILLVIVASSIALAAEDPVCTNSDRNKVLRYFDY
VFTGVFTFEMIIKMIDQGLILHDGSYFRDMWNILDFIVVVGALIAFALTNNKGRDIKTIK
SLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYQLFMFIFAVIAVQLFKGKF
FYCTDSSMNSEKECQGYYIDYSRDKKEVKRREWKRHEFHYDNVCWALLTLFTVSTGEGWP
EVLQHSTDVTEESMGPSRGNRMEMSVFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMIQ
ECSLEKNERACIDFTISAKPMTRYMPQNRQTFQYRLWHFVASPSFEYTVLVMIALNTVVL
MMKYHSAPAAYDMVLKHLNSAFTVLFSMECVLKILAFGLVNYFRDTWNIFDFITVLGSIS
EIIVDLQSVNTINMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLF
FIYAIIGMQVFGNIKLNDESHINQHNNFKTFFSALMLLFRSATGESWQEIMLSCLAGREC
EPDSSISPLTTSPDHEGGCGTDFAYCYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSI
LGPHHLDEFVRIWGEYDRLACGRIHYTAMYEMLTHMSPPLGLGKKCPAKIAYKRLVLMNM
PVDEDMTVHFTSTLMSLIRTALDIKIARGGEDRIALDSELQKEISIIWPYLPQKNLDVLV
PINKDTDMTVGKIYASMMIMDYFKTNKAKKLRQQLEAQKSSLMFKRLDASTLPEDILSDS
QSLPMMAHSAGSALTRGGFLALSPISPQELFLQPISTDADGAQEQNPVGGCSRGIEAPQE
LPLGTGLCARASSMPRLAVESQAEVASGSMKRSVSTVADQRVNGLWEEEKSPERVYRPRH
KSYKAAVSRSEHWKQGDRDRGRSKERCHLLSPNASRGNSEERSLQPSRSSSAEGARPRDK
QGNSSDSPVPSTSESSTPSARRPAPQARSRPHISYSPLHPSVGEEDDDEQGSPQTVRRGK
PNRKAQEGSAAERRRDADRDPSPPRRYPSEPFLASQEGDHSPDPSGPMETLTFEAAVACS
LGRSNTVTSSRPRLRTGWQVPNGHFRKRMAATTSAAGCDALSDTEEDDRC
NT seq
6453 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccagttcagaccagtccctctcccgctccctctcgccgggccccctgtccccg
tccggctccggtccagctggacggatgcacgcccagtcctccctgtccctccccgagccc
gagccctggaggacgtcgggcgccagcccccggcacggcctggcgcaggcagcccgctcc
agctccctgcaggtgccccacgccctccccgagtgcctggggctgccccctcgagccgcc
agcttcgacgtgccgtgcgctcaggacgacgcctcgtccgaccagggctcggggtcgctg
agcccccacggcatgcagcggcggcgcgggggcctcgtggagcagaaagacatcataatg
gcgcaccaggctcacaagatccagagcacgccgcaggcccgcaggaaggagtgggaaatg
gctcgcttcggagacgagttcgcgcccggcgcggtggactccggagacggggacgcggag
cgcggcggcgaggaacaggacgcggcggcggtggccgcggggctcacggcttccataagg
caagccaaggctcagcgggcccggaccatggccatgtacaaccccgtcccccaccggcag
aactgcctcaccgtcaacagggcgctcttcatattcgcggaggacaacatcatgaggaga
gccgcgaggcggatcatcgagtggccaccatttgagtacatgatcctggccaccatcacc
gccaactgtgtggtcctggccctggagcagcacctccccggagaggataagacccccatg
gccaagagactggagaagacggagccgtacttcatcgggatcttctgcttcgaggcggcc
ataaagctgctggccctcggcttcgttttccacaaaggctcctacctgaggaacggctgg
aacgtcatggacttcatagtcgtgctgagcgggattctggccacagctggcgcccacatg
aacatcccggtcgaccttcggaccctgagggcctgtgcgagtgctgcgacctctcaagct
cgtctccggcatcccaaggacgagaagtacacggacacgtccaccgccagcatgtcgcgg
tccaggatgaacttccgcagcgggcggcggggcccggccgcctacctgcggcgcaaagag
cgcatgctgcgcatctccatccgccgcatggtgaagacggacaccttctacctgatggtg
ctcagcctcgtggctctcaacaccgtctgcgtggccatcgtccaccacaaccagcccgac
tggctgaccatcttcctctactatgcagagtttgttttcctcgggctgtttttggcggag
atgtttttgaagatgtacggtctgggtttccggctctacttccattcatcgttcaactgc
ttcgactgtggggtcattgttggcagcatctttgaggtggtttggggcttcttcaggccc
ggcatgtcgttcgggatcagcgtactgagggccctgcgactcttgaggatcttcaaaatc
accaaatactgggcctctctcaggaacctggtggtgtccctcatgagctccatgaagtcc
atcatcagcctgctgtttcttctctttctcttcatcgtggtgtttgccctgctggggatg
cagctttttggaggaaggtttatctttgaagattacactcccaccaactttgacacgttt
ccagctgccatcatgacggtgtttcagatcctgaccggtgaggactggaacgaggtgatg
tacgatgggatccgctcgcagggcggggtgcagtacggcatgtggtcttccatctacttc
atagtgctcaccttgttcggaaactacactctgctgaacgtcttcttggccatcgctgtg
gacaatctggccaacgcgcaggagctgacgaaggatgaagaggaggaggaggagttcttc
aaccagagatatgccaggggccgagatggcctgatatccgatgggaggagaagaccctac
ctgtacaggaagcgagccatccaccgaggccgccccaacttccccgaggagccggaggag
cgggcgggggcccccgacgaacagcccctcaagggccccaacgccttcgtgacccggcgc
gagaggaggaggaaggtccacatgtccgtgtgggagcagagagccaaccagctgcgcaag
cgccggcagatggcgagcagagaggagctggtcgcaagcgccgccgcggaggacgccgcc
gaaacccccggcgtccccctagaggccgcgccggctcacccgcccgggtctcccgcctcc
gcggggacgccgctccccgaggaggacgtgtcggtcgccatcgccatccccgagccgccg
gccgccgagcctctcgtgagcctcggcgaggagaaagcggcggtggggcccaaccaccgg
gccgccggcgggggccggcacaggatggcccgccggttcaggcccggtcaggacgatggg
gcgcggcacaggaggcaccgccaccgggacgcccgcgccgaggccaagagcctggactgc
ggcagccaggcggcgcgcgaggagccgcacgccaggctgtcgcgcagccaggagaggaag
acgctggacgagggggaggagaaggacgagagggaggagaaggcggaggcggacggcggg
tcggtccaagacgacggcgcgacgtgcatcatcaacccgtacgcagaggatggagaagac
gcccggagagagatccctgacccttctcggtgtgagctggaccccgccgggtccgagcag
ggcgaaggcgccgccacggaccaagccgcccccgaggagcccgcctcggaggccggcgag
ttcgccgcggggcccggcgagcccgtgagccgccccgcctccgtcaagcggggggacaag
gccaggccggcgggaagcgtggccatcgaaatgtccgcgcagccgctgctggagctcacg
ccgatgacagggaacagcaaagagtcggaggtgtacagctccgagcagacggacagagac
gaggagacgggggacgaggagcgggagccttcggttccccccaaacccgccgctccggat
agcatgttcatcttcaaagcctccaaccccatcaggaagatctgccactacgtggtgacc
atgcgctactttgagatgtccatcctcctcgtgatcgtggcgagcagcatcgccctggcc
gccgaggaccccgtgtgcaccaactcggacaggaacaaggtgctgcggtatttcgactac
gtcttcaccggagtgttcacctttgagatgatcatcaagatgatagaccagggtctcatc
ctgcacgacggatcatatttccgagacatgtggaacatcctggacttcatcgtggtggtg
ggagctctgattgccttcgctctgacaaacaacaaaggccgagacatcaagacaataaag
tccctcagagtcctgagggttcttcgtcctctaaaaaccatcaaacggctccccaaactc
aaggctgttttcgactgcgtggtcacctctctgaagaacgtcttcaacatcctcatcgtg
taccagctcttcatgttcatcttcgctgtcatcgccgtgcagctcttcaaggggaagttc
ttctactgcaccgacagctccatgaactcagagaaggaatgccagggctactacatcgac
tacagcagggacaagaaggaggtgaagaggagagagtggaagagacacgagttccactac
gacaacgtctgctgggccctcctcacgctcttcaccgtctccaccggagaggggtggccc
gaagtcctgcagcactccaccgacgtgactgaggagagcatggggccgagccgcgggaac
cgcatggagatgtccgtcttctacgtggtctacttcgtggtcttccccttcttcttcgtc
aacatcttcgtggccctgatcatcatcaccttccaggagcagggcgacaagatgatccag
gagtgcagcctggagaagaacgagcgggcctgcatcgacttcaccatcagcgccaagccg
atgacccgctacatgccgcagaaccggcagaccttccagtacaggctgtggcactttgtg
gcgtcgccgtctttcgagtacacggtgctcgtgatgatcgccctcaacaccgtggtgctc
atgatgaagtaccactcggcgccggcggcctacgacatggtcctgaaacacctcaactcg
gccttcaccgtcctcttctccatggagtgcgtcctcaagatcctggcgtttggattggtg
aactactttcgagacacttggaatatttttgatttcatcactgtgcttggcagcatctct
gagataattgtggatttacagtcggtgaacaccatcaacatgagtttcttgaagctcttc
cgagcggcccggctgatcaagctgctgaggcagggctacaccatccgcatcctgctgtgg
accttcgttcagtccttcaaggcccttccgtacgtctgtctcctcatcgccatgcttttc
ttcatatacgccataatcggaatgcaggtgtttggaaacatcaagctgaacgatgagagt
cacatcaatcaacacaacaacttcaagacctttttcagtgcactgatgctgctattcagg
agcgccacgggggagtcctggcaggagataatgctctcctgtctggcgggtcgggagtgt
gaaccagactcctccatctcccccctgacgacgtctcccgaccacgagggaggctgcggg
acggactttgcgtactgctactttgtctcgttcatcttcttcagctcgttcctgatgctg
aatctgttcgtggccgtgatcatggataactttgagtacctgacgcgagactcctccatc
ctgggtccccatcacctggacgagttcgtccgcatctggggggagtacgaccgcctggcc
tgtggtcggatacactacactgccatgtacgagatgctgacacacatgtcaccgcccctg
ggcctgggcaagaagtgtcccgctaagatcgcctacaagaggttggtgttgatgaacatg
cccgtggacgaggacatgaccgtccacttcacctccaccctgatgtcgctcatccgcaca
gctctggacatcaaaatagccagaggcggcgaggaccgcatcgctctggatagtgaacta
cagaaagagatcagcatcatctggccgtaccttccccagaagaacctggacgtcctggtg
ccgatcaacaaagacacggacatgacggtggggaagatctacgcttccatgatgataatg
gactacttcaaaaccaacaaagccaagaagctcaggcaacaactggaggctcagaagagc
agcttgatgttcaagcgcctggacgcctccacgctccccgaggacatcctgtccgacagc
cagtcgctgccgatgatggcgcacagcgcaggctccgccctgaccaggggaggctttttg
gccttgagccccatctcccctcaggaactgtttttgcagcccataagtaccgacgctgat
ggagctcaagagcagaacccggtgggcgggtgcagtagggggattgaagccccacaggag
ctcccgttagggacgggtctgtgtgcgcgggcctcttccatgccccgtctggctgtagag
tcgcaggcggaggttgcgagcggctccatgaagcgctccgtctccacggttgcagatcag
cgggtgaacggcctttgggaagaggagaaaagcccggagagagtttatcgaccccgtcac
aaaagctacaaggctgccgtttcccgctcggagcactggaagcagggcgacagggaccgc
ggccggtctaaggagcgctgtcacctgctttctcccaacgcgtcccgcggtaactcggag
gagaggagtttgcagccctcgcggtcttctagcgcagagggagcgcgtccccgggacaag
cagggcaacagctcggacagtccggtgccctccacctccgagtccagcacccccagcgcc
cggcgacccgccccgcaggcccgctctcgcccccacatctcctactccccgctgcacccc
tccgtcggcgaggaggacgacgacgaacaaggcagcccgcagaccgtgaggcggggcaag
cccaaccggaaggcccaagaggggtccgcggccgagagacggagggacgccgaccgagac
ccgtccccgccccggcgctacccctccgagccgttcctggcctcccaagagggcgaccac
agcccggacccctccggccccatggagacgttgaccttcgaggcggccgtggcgtgcagc
ctggggcgctcgaacaccgtcacctcgtcccgcccgcgcttgcggaccggctggcaagtc
cccaacggacactttcgcaagcgcatggccgccacgacctccgccgcgggctgcgacgct
ctcagtgacacagaggaggacgaccgttgctag
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