Pungitius pungitius (ninespine stickleback): 119205474
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Entry
119205474 CDS
T07626
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04020
Calcium signaling pathway
ppug04148
Efferocytosis
ppug04218
Cellular senescence
ppug04310
Wnt signaling pathway
ppug04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119205474 (nfatc4)
04020 Calcium signaling pathway
119205474 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119205474 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
119205474 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119205474 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119205474 (nfatc4)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
119205474 (nfatc4)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
119205474
NCBI-ProteinID:
XP_037313308
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Position
15:complement(3712935..3721402)
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AA seq
898 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPQRQGHRPSPARTAEPQSSVPGEESECALRRLEPSG
SSGPVTDNHHSIGAPSPPPSANQRAGMHSPPPRRAAARDFSGTYESLPARSVQVSESRVV
ECPSIQITTISPEDDLAPTISSYWDMGGGGGWDRERLYLPLLDPFTYRERCPGSLSPSPS
PGSSPSSRGWLSPASSCDSLLVEEEELNEAAVSFGLSPSSRPTSPGGKKRRNSPLASPCT
SRRGSYSEELQGCNLEGRDSAPQSQAPPSSCELSIPQKTRKTSLEQLSSREVDQEPAPGH
GSPCPPPPDALQPRRDPPLLGMDYLSVPPALAWGRTRASAHSPLFRSNALPPLDWPLPPQ
YDQYELRIEMQPRPHHRAHYETEGSRGAVKATPTGHPVVKLCGYTERKPLSLQVFVGTAD
DRSIRPHPFYQIHRVTGKMVGTASHESVQAGTKVLDIPLSPENNMTALIDCAGILKLRNS
DIELRKGETDVGRKNTRVRLVFRAHLPLAPPAAPPGRVLALQAASLAIECSQRSAQELPV
IESVSLTSCSVEGGEELLLSGSNFLAISRVLFMERGTDGKLQWEEEAHVDRDSSNESLLC
VRVPAYSDLSVTRPTSVSLYVSNGKRKRSSTHCFKYLPIMFKEEDPLLSRPAPPPLDGGP
ACPVGGRPGLEGGFPVRSDPMADERGLGFRLPPYPSAYSPPCPAVGFHEEYCSKADGAAE
EPRAALSERQPSFENLELGFTELLPPLYPRGPQPPSPSPSPWLDSPYLSSSPSPSHSSSL
SPFPAGSPISTSPLPPMPTSPYPQYSAYPQDACPSPPSNHSPYQDMYPAPYPHYEGWDPQ
GRVLGMEHGGDRDAKIQDCPLQFASSSMHHITFEEVTEYIGEDIQSFQSVSRMDNQPN
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggctgggaggagggagagttcgagttcaagttggtgttc
gaggaggacccgccgcaacgccaaggccaccggccatccccggcgcgcacggccgagccg
cagagctccgttcccggggaggagagcgagtgcgcgctgcggcgcctggagccctccggc
agcagcggccctgttacagacaaccaccactcaatcggcgccccgagcccgcccccgtcg
gccaatcagcgtgccgggatgcattccccgcctccacgcagggccgctgccagggacttc
agtgggacctatgagagcctgccggcacgctctgtacaggtttcagagtctcgtgtggtc
gaatgtcccagcatccagataaccaccatctccccagaagacgacctggcaccaaccatc
tccagctactgggacatgggtggcggcggtgggtgggaccgagagcgcctctaccttccc
ctcctggaccctttcacctaccgcgagagatgccccggctccctcagcccgagccccagc
cccggctccagcccttcctcccgcggctggctcagcccggcctccagctgtgactccctg
ctggtggaggaggaggagctcaacgaggccgccgtcagcttcgggctctcgccgtcctcg
aggcccacttctcccgggggtaaaaaacgcagaaactctcccctggcctccccctgcact
tcacggaggggcagctactcggaagagctgcagggatgtaacctcgagggtagagactcc
gcccctcagtcgcaggctccgcccagcagctgcgagctcagcatcccgcagaagacgagg
aagacgtcgttggagcagttgtcgtccagggaggtggatcaggagccggctccaggccac
ggctcgccctgcccgccgccgccagacgccctgcagcccaggagagatccccctttgctg
ggaatggactacctctctgtgccgcccgccctcgcctggggccggacccgcgccagcgcc
cacagccctctgttcaggtccaacgccctgccgccactcgactggccgctgccgccccag
tacgaccagtacgagctgcgcatcgagatgcagccgcggccgcaccacagggcccactac
gagacggagggcagcagaggagccgtcaaggccacgccaacgggacacccggtggtcaag
ctgtgtggatacacggagaggaagccgctctccctccaagtcttcgttggaacagctgac
gaccggtcgatcaggccacaccctttctatcagatacacagggtgacggggaagatggtg
ggcaccgccagtcacgagagcgtccaggcggggaccaaagtgctcgacatcccgctcagc
cccgagaacaacatgacggcgctcatcgactgcgccggcatcctgaagctgaggaactcg
gacatcgagctgaggaaaggggagacggacgtcgggaggaagaacactcgcgtgcgcctg
gtgttccgggcccacctccccctggcgccccccgccgccccgccgggtcgagtcctggct
ctgcaggcggcctccctggccatcgagtgctcccagcgctcggcccaggagctgcccgtc
atcgagtccgtcagcctcacctcctgctccgtggaggggggagaggagcttctgctgagc
ggctccaacttcctggcaatctcccgggtccttttcatggagagaggcacagatggtaaa
ctgcagtgggaggaggaggctcatgttgaccgtgacagcagcaatgagagcttgttgtgc
gtgagggtccccgcctacagcgacctgtccgtcactcggcccacgtcggttagtctttac
gtgtccaacgggaagaggaaaaggagcagcacccactgcttcaagtacctccccatcatg
ttcaaggaggaggacccgctgctgtcccgccccgccccgccacctctggacggcgggcct
gcgtgcccagtggggggtcgacccggtctggaggggggcttccccgtgagaagcgacccc
atggccgacgagcgaggcctgggcttccgcctgcccccctacccctccgcctactcccct
ccctgccccgccgtgggcttccacgaggagtactgctccaaagccgacggcgccgcggag
gagcccagggcggcgctctccgaacgtcagcccagcttcgagaacctggagctgggcttc
accgagctccttccccccttgtacccgcgcggcccgcagcctccctccccctccccttcc
ccttggctggactccccatacctttcctcctcgccctctccctcccactcctcctctctc
agcccgtttcctgccggcagccccatctcaacctcccctctgcctcccatgcccacctcc
ccttacccccagtactctgcttatcctcaggatgcgtgtccctcaccgccctccaaccac
agcccttatcaggacatgtacccggcaccctacccccactacgagggctgggacccccag
ggaagggtgctcgggatggaacacgggggagacagggatgccaagatccaggactgcccc
ctgcagttcgccagctcttccatgcaccacatcacatttgaagaagtgacggagtacatc
ggggaagacatccagtctttccagtcggtctcgcggatggacaatcagccaaactga
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