Pungitius pungitius (ninespine stickleback): 119206796
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Entry
119206796 CDS
T07626
Name
(RefSeq) uncharacterized protein LOC119206796
Organism
ppug
Pungitius pungitius (ninespine stickleback)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helitron_like_N
PIF1
DUF6570
AAA_30
AAA_19
OTU
Exo_endo_phos
REP_ORF2-G2P
Pif1_2B_dom
AAA_22
AAA_16
ORC-CDC6-like
AAA_28
Motif
Other DBs
NCBI-GeneID:
119206796
NCBI-ProteinID:
XP_062414175
LinkDB
All DBs
Position
16:2095678..2105695
Genome browser
AA seq
3050 aa
AA seq
DB search
MRVLEAVTKKVPETPGGEGSKESSSTGVQQEAVPNEVLPSGGESEGSSSTGDEEGSIKLK
MKKLSRKRHNQRFIAGKCDRERSAKSTRGKCYDAKTISGAVSREGESCTCSEKMPPPVVA
GTRREDTLHDDGNVSTACSVAAVIKHVLAPVCTWKASDIDDICTEGGKLNMFVAEAGKSS
DVKGKCTLIQQHSVFGRKFKVRIGKPQQRHFNDSAEEPELHEVLQEHLLRDGMCLLNMYG
EVSAIIHHDKHLVFVDCGSRDASGLASSVGTPVAVFNSSLHDLMLHIRNLKESFGAKWYA
ISSISVKEHNVECVEGLSDSDMEVAVHPEDSRPVSVECPTTSVQGSFHQGDSQFEYGGLQ
CMAVGLVSIAKHSTHCVFSWQSSDLDEVVVSGDELYSSLRATNAISGGSQLLCVPDLPKD
SVINGRRYDFSYGDYVTGDVDLVEGELIELGVHVTLRKGLQKILTQYNTCLMTLRGSTCA
IICQQGRYAVVDSHARNALGMVDAGGQSVVVYFSDFEGLFSHICRFAEALNTSQKPFEIA
GVCVTQNDLVDSGRLSFGQNDPVVTETTLGSSLHQKSIQPTPGCSNRRRGTKRKVSKGNT
NSKKVKTNATLGSSASQTGAMCKVAKGTCTSPVIKTSVTEVEPDIVFVSDVISKQLQFRP
LCNEVSQILCKQLDIVSEKDDSVSTNVGALGAPCLNDKIVGDGNCFFRAISQAVSGTQRY
HRKVRLAVVKHIKSNAEAYTCHLRSEYNSITEYLILSRMSYVGSWATEIEIQATADFLGI
SIFTYHTNRWLEYSCTSKQLTTEGLYLENCNGNHYESVVCVQQPGMLSCYCYCKEDTPCS
TDYSRRQSKRKMNTLENLRFDTSCVLEPVADISEQPDSSLPATDIDFVMLSDESVEDDIT
ELHSTFPAKDIDSVIFNDVPAVCWEFHPLTSDVAKSVCNLYNLSYEKQDVKLPTMSGSLG
AVCKTRTIVKDKNSFFRAIAQAVSGSQKCHRKIRLAVVKYMEDQIDNIKIIEKGYASISH
YIKETHMKYVGYDATEIEIEATANAFGLDIYIYSGKKWFKYNSVNPVSSEVAIYLKHDEN
NHYEPVLCVKHITEVSCFDLCKMDISSETQYMRRRSNVKFQDSSNICSPTKLSTYLKRKK
GIQLKALYLGSSFRRQKLNTASKKLYQENLSHRLRVQQMSKANYKDNLLYKENVKQLSKN
KYHQNHLHKENKKKQSIKKYQQNLLHKENVKKLSKNKYQQNQLHKEMLKEFSKNKYWTNL
IYRQKVKARSKNKYGNILHKKRVIARNKTRFQQRKEQSKLFDFVMEQFSEKVRKGPEFVC
CVCNRLLFEYQVSHWKNDYGNREDIALIAEKCISRNHLHECDDDCVVPCKWLDMGRGKLW
ICYTCHSKIKRGVMPPECVLNNMQVHPIPEELACLNSLEQHLIALHIPFMKMLALPKGGQ
NGVHGPVTCVPANIVETTNLLPRSEMDGSLLRVKLKRKLTYKGHYEYQFVDPLRIKKALM
VLKKTNVYYKDVEFNENWLNDFCREEDKNVDNDAENNQTAPDVSDELLHDRQQHCMFQDT
CLMPVDIGQEVLDQYFDSTLNLAPAEGSTPVKLLTDISNEAKSFPVLFPQGSNTFHDYRQ
QKLTLARYLNLRLLNADNRFGNSVEYIFYSQYVSEVQQVISSVSIALRKGKAGHNAKSID
VDLLKDQETLKNLLQFDNGFRFLKPIRGTPSFWQGAQHDLMACVRQLGVPTWFCSFSSAD
LRWKSLLTSILKQEGRTQTLDDLEWSERCELLRRNPVTAARMFDYRWHCFLREVLMSPSQ
PIGKIIDFFYRVEFQQRGSPHVHCLFWIENAPKLDKNTDDEVVQFIDKYVTCELPSQDEP
LKAIVTSVQQHSKRHSKSCKKKHTICRFNFPRPASTRTFICRKTEECEQTCLCNVTPLTP
CGCGHKERLAAEEKKRALARKMMTSIKLALSNEEANFGCVAELFEALGINQTTFEAAYNC
VSRNTHVVLKRDIDEVWINQYNRNLLKCWDANLDIQYVVNAYACVVYIISYISKAEKEMG
LLLRNAHREASKHGNVDAKDALKKLGSVYLHNRDVCAQEAVYRLTGMHLKECSRKVQFVP
TGDTTVKISLPLSVLKQKADKTNLSTADMWMIGLEDRYKNRPNDAVFNDVCLASFASEYR
VLSKNERTNNRIQLKNNLGFVVKRTRSQPAVVRYARFSKTKCPEKFFQSILQLFMPYRVD
SQLKPSNCETFQLFYENGHVTCNDGSRQSVKSIVDKNRALFEVDSEELDTAQQCIDDVGV
LEDAWCELCPEQELERLESEQERRANDTVEEHVESIPDLAVSQQQVAHLQKTNTLSRNEG
LKLVRSLNNTQMSIFYQVRTWCLQKVSGQNPVPFHVFITGGAGTGKSHLIKALQYEATRL
LSPLGRHPDELCVLLTAPTGIAAYNLNASTIHTTFSIATNVTLPYTPLGEEKINTLRAKY
SNLQILVIDEISMVDHRLLAYVHGRLRQIKQSGNFSPFGNVCVIAVGDFFQLPPVKGKAL
YVDDLGNDLWSTNFKIIELTVIQRQKDTAFAELLNRLRKRSKSTPMLPSDTSLLRTRETG
EESSSLHIFPTNAQVETHNVEQLLKTCEDHVKIDAQDYERNKKTGKLELKRGHHATVFNT
TLAQQLVLGENARVMLTKNVDMMDGLVNGVCGTVTHIVNSTGNNFPKIVYVQFDDKEVGA
QTRGNHACASSHLLTSTPILPQEDRVTNKGGLRRQFPLKLSWACTIHKVQGITVANAVVS
LKKIFAAGQAYVALSRITTLSGLILQDFKEDAIYCNNNVQEALQCMQPFLCAYSTGHKSY
THNFRVLLMNVQGLPAHVKDLLLSTQHLQLNCIAVTETWLTETSLKESVNIIGYTFDSCP
RSTSYNSRHPVLLDLQAQQHGGVAMYTEDSLSYNILQVPNVNIECLVFHCATYDMLLAVI
YRPPSYAMSLFKEHLEKLLSWLEERSNTITVMGDFNDDIRKSSTICDFMTDNGYIQIVTQ
PTTEKGTLIDHVYVRTTQFEVEAEVVPMYFSDHEGVVCSFTTKTFHNVKA
NT seq
9153 nt
NT seq
+upstream
nt +downstream
nt
atgagggttttggaggctgtaacaaagaaggtcccagaaacaccaggtggagaaggttcg
aaggagtcgtcatctactggtgttcagcaggaagctgtcccaaacgaggttttgccgagt
gggggggagtctgaagggtcgtcttctactggtgatgaggaagggtctatcaagctgaag
atgaagaaattgtctcgtaagcgacacaaccaaagattcatcgccggtaagtgtgatcga
gaacgatctgccaaatccacccgagggaagtgctacgatgccaaaaccatcagtggtgcg
gtaagtcgtgaaggtgagtcgtgcacatgttcagagaaaatgcccccacccgttgttgca
gggactcgtagagaagacacactgcatgatgatggaaatgtatcaactgcatgcagtgtt
gccgctgtaataaagcatgtcctggctcctgtgtgtacctggaaagcatcagatattgat
gacatctgtacagaaggtggcaagttaaacatgtttgtagctgaagcaggtaaaagtagt
gacgttaaagggaagtgcaccttgattcaacagcatagtgtctttggcagaaaatttaag
gtaaggattggtaaaccgcagcaaagacatttcaatgactctgctgaagagcctgagttg
catgaagtgctacaagaacacttgttgagggatggcatgtgtctgttgaacatgtatggt
gaggtttctgccattattcatcacgacaaacacttggtgtttgttgattgtgggtcacgt
gatgcatctgggttggcatctagtgttggcacacctgtggctgtcttcaacagcagtctt
catgacctgatgcttcacatcagaaatctgaaggagtcatttggcgcaaagtggtacgcc
atcagtagcatttctgtgaaggagcataatgtggaatgtgtagaagggctttcagacagc
gacatggaagttgcagttcaccctgaggacagccgtcctgtcagtgttgaatgtcctaca
acatctgtccagggatcgtttcatcaaggagacagtcagtttgaatatggcggacttcag
tgcatggccgtcggtttggtgagcatagcaaaacactcaactcactgtgtgttttcatgg
cagtccagcgatctggatgaggttgtagtttcaggcgatgagttgtattcttctctgcgt
gccaccaacgccatcagtggtgggtcccaactgctatgtgtaccagatcttcccaaagac
tctgtgattaatggacgcaggtatgacttttcatatggtgactatgttactggagatgtt
gatttggttgagggagagcttattgagctaggtgtacacgtcactttaagaaaggggtta
caaaagattctcacacaatataacacgtgccttatgacattacgtggcagtacatgtgca
ataatttgtcaacaaggacgttatgccgtggttgactctcatgcacgcaatgcacttgga
atggtagatgctggaggacaaagtgttgttgtgtattttagtgactttgaaggcctgttt
agtcacatatgcagatttgcggaagcattaaacacatcccaaaagccatttgagattgct
ggtgtttgtgtcactcagaatgacctagttgatagcggccgcttgtcctttggtcagaac
gaccctgttgtaactgagacaacgttgggttctagtttacatcagaagagtattcaacca
acacctggctgctctaacagacgcagaggtacaaagcgtaaggtgtccaagggaaacacc
aactcaaaaaaggtaaaaaccaatgcaacacttggcagctctgccagtcagacaggtgca
atgtgtaaggtggcaaagggaacttgtacatcaccggtaataaaaaccagtgttactgag
gttgagccagacatcgtatttgtcagtgatgtcatcagtaaacagttgcagtttcgtcca
ctttgtaatgaggtttcacaaattctctgcaaacagttagatatcgtgtcagagaaagat
gattcggtatctacaaacgttggtgcgttgggggctccatgtttgaatgacaaaatagtt
ggtgatggaaactgcttctttagagccatcagtcaagctgtgagtggtacacagaggtat
cacagaaaagttcgccttgctgtggttaaacacataaaaagtaatgctgaagcatatacg
tgtcatttgagaagtgagtataattcaatcacagaatatctcattttgtcacggatgtct
tatgttggcagttgggcaactgaaattgagattcaggcaacagcagattttttgggaata
agtattttcacatatcacactaatcgctggcttgaatatagttgcacaagcaaacagtta
accactgagggactgtatttggaaaactgcaatgggaaccattatgagtctgtggtttgt
gttcaacagcctggcatgctgagttgttattgttattgcaaagaggacacaccttgctcc
actgactattctcgtcgacagagtaagagaaaaatgaatactttggagaatctccgtttt
gatacaagttgtgtgcttgaacctgttgcagatatctccgagcagccggatagttcattg
ccagcaacagacattgattttgtaatgttgagtgatgaatctgttgaagatgatatcaca
gaactacatagtacatttccagccaaggacatagatagtgtaattttcaatgatgtacct
gccgtatgttgggaatttcatcccttgacctcagacgtagcaaaatcagtatgcaatttg
tataacttgtcctatgaaaagcaggatgttaaactaccaaccatgagtggttcattaggt
gctgtgtgcaaaactcgtacaattgtaaaggataaaaatagtttctttagagcaattgct
caagcagtcagtggttcccaaaaatgtcaccgaaagattaggcttgcagttgtaaaatat
atggaagatcagattgataacattaaaataatagaaaagggatatgcttcaatatcccat
tatattaaagagacacacatgaaatatgttggttatgatgccacagaaatagaaattgaa
gcaactgcaaatgcttttggactggatatatatatatacagtggtaaaaagtggttcaaa
tacaattctgtgaatccagtttcgtctgaagtggcaatttacctaaaacatgatgagaat
aatcactatgagccagtactttgtgttaaacatattactgaagtaagttgctttgattta
tgcaaaatggatatctcatctgaaacccagtacatgaggagaaggtcaaatgtaaaattc
caggattcttcaaacatctgtagtcctactaaattatcaacctatttgaaaaggaagaag
ggcatccaattaaaggcattatatttaggaagttccttccgtaggcagaaacttaacaca
gcgagtaaaaagctatatcaggaaaacctgtcacatagactgagagtccagcaaatgagt
aaagccaattataaggacaatctgttatacaaagaaaatgtaaagcaactcagtaaaaat
aaatatcatcaaaaccacttgcacaaagaaaacaaaaagaaacaaagcataaaaaaatat
caacaaaatctgttacacaaagagaacgttaagaagctcagcaaaaataaatatcaacaa
aaccagttgcacaaagaaatgttaaaggaatttagcaaaaataaatactggacgaatctc
atttacaggcagaaagtgaaggcaaggagtaaaaacaaatatggaaatattctgcataaa
aaacgtgttattgcacgtaataaaacaaggtttcaacaaaggaaagaacagtcaaaactg
tttgattttgtcatggagcagttttctgaaaaggtaagaaaaggaccagagtttgtatgt
tgtgtttgcaatcgactgcttttcgaatatcaggtgtcacattggaaaaatgactatggt
aaccgtgaggacatagctttaattgctgagaaatgtatctcacgtaatcatttacatgaa
tgtgatgatgattgtgtagtaccatgcaaatggctggatatgggtagaggaaagctatgg
atctgttacacatgtcattctaaaattaagagaggagtaatgccacctgaatgtgtactg
aacaatatgcaagtacatcccattccagaagaactggcttgtttaaacagcttggaacag
catttgattgctttgcacataccttttatgaaaatgttggctttacctaaaggaggtcaa
aatggagtccatggacctgtgacgtgtgttccagccaatatcgttgagactactaacttg
cttccacgttcagaaatggacggatctcttttgcgtgttaagttaaagcgtaagctcact
tataaaggccactatgagtatcaatttgtagatcccttacgcattaaaaaagcactgatg
gttttgaaaaaaactaatgtatattataaagatgtagaatttaatgaaaattggctaaat
gatttttgtagagaagaagacaaaaatgtagataatgatgccgaaaataaccaaaccgct
ccagatgttagtgatgagctattacatgatcgacaacagcactgcatgtttcaagacacg
tgtctgatgcctgtcgatattggtcaagaagtattggatcagtattttgacagtacgtta
aatctggctccagctgaaggtagcactccagtgaaattattaacagatatttccaacgaa
gccaagagctttcctgtattgtttccacagggatccaatacattccatgattataggcaa
caaaagttgacattagcacgatatttgaaccttagacttctgaatgcagataaccgtttt
ggtaacagtgtagaatatatcttctattcacagtatgtatcagaggtgcaacaagtcata
tccagtgtctcaatagcattgcgtaagggaaaagcaggccataacgccaaatcaattgat
gttgatttactgaaggatcaggaaactttaaaaaacttgctgcagtttgataatgggttc
cgtttccttaagcctattcgaggaaccccatctttttggcagggagctcaacatgacctc
atggcttgtgtgcgtcaacttggggtccctacatggttttgttctttttcttctgcagat
ttacgttggaagtcacttctcactagtattttgaaacaagaaggtaggacacaaacacta
gatgatttagaatggtctgagagatgcgaacttctgcgacgcaatcctgtcactgcggca
aggatgtttgactataggtggcattgttttttgcgggaggtactcatgtctccatcacag
ccaattggcaagataatagactttttttatcgggtggaatttcaacagcgggggtcacct
catgtgcattgtcttttctggattgagaatgcaccaaaacttgataaaaacacagatgat
gaagtagttcaattcattgataaatatgtcacctgtgaattgccatcacaagacgagccg
ttaaaggcaattgtgacatctgtgcaacaacattcaaaaagacattcaaaatcgtgtaag
aaaaagcacacaatttgtcgatttaactttcccaggccagcatccactcgcacttttata
tgtcgtaaaaccgaggaatgtgaacaaacctgtctgtgtaacgtaactcctttgacaccg
tgtggatgtggacataaagaacgtttagctgcagaagagaagaagagggcacttgcgagg
aaaatgatgacatccattaagttggctctgtcaaatgaggaggctaattttggttgtgta
gcggagttgtttgaagcattggggatcaatcagactacgtttgaggctgcgtacaactgt
gtttccagaaatacacatgttgttttaaaaagagacattgatgaagtgtggatcaatcag
tacaacaggaatttgttaaaatgctgggatgcaaaccttgacattcagtacgtggttaat
gcctatgcttgcgttgtgtatatcatttcatacatctcaaaggcagagaaggagatggga
ttgttgttgcgaaatgcacacagagaggcatccaagcatggcaatgtcgatgctaaagat
gcattaaaaaagttaggaagtgtttacctgcacaaccgagacgtttgtgctcaggaggct
gtgtatcggttgacgggcatgcaccttaaggaatgttcgcgaaaggttcagtttgtgcca
acaggagacactactgtcaaaatcagtctgccgttaagtgtgttaaaacaaaaggcagac
aagacaaatctctcaacggcagacatgtggatgattggcttagaagaccgttataagaac
agaccaaatgatgccgttttcaatgatgtgtgtctggcatcttttgcatcggagtatcgg
gttttgtcaaaaaatgaacgtacaaacaatagaattcaactcaagaataatctcggtttt
gttgttaaaagaacaaggtctcaacctgcagttgtccgttatgctcgcttttccaagact
aaatgtccagagaaatttttccaaagcatattgcagttattcatgccatatcgtgttgac
agccagttaaaaccatctaactgtgaaacatttcaactattttacgaaaatggtcatgtt
acctgtaacgacggatcacgacagtccgtgaagtccatcgttgacaaaaaccgagcactg
tttgaagttgactcggaggaattggataccgcacaacagtgtattgatgatgttggtgtt
ctggaagatgcgtggtgtgaactgtgcccagaacaagaattggagcggctagaaagtgaa
caagagcgcagagccaatgacacggtagaagagcacgtagaaagtattcctgatcttgca
gttagtcagcaacaagttgcacatttgcaaaagacaaacactctaagcagaaatgagggg
ttgaaattagttcgtagtctgaacaatacacaaatgtccatcttttatcaagtaagaacg
tggtgtttgcaaaaggtaagtggtcaaaatccagtcccctttcatgttttcataaccggt
ggtgcaggaactggaaaaagccacttgatcaaggcacttcaatacgaggcaacgaggtta
ctctccccactgggtcgtcaccctgatgaactgtgtgtattgttaactgctccaacaggc
attgctgcatacaacttgaatgcttcaaccattcataccacgtttagcattgctacaaat
gtcacactgccttacacccctttgggtgaggaaaagataaatactttgagggccaaatac
agtaaccttcaaattttagtcatcgatgaaatttcaatggttgaccatagattattggca
tacgtacatggtagattacgacaaattaaacagagcggcaacttttccccatttggtaat
gtgtgtgtgattgcggttggagatttcttccagttgcctccagtaaaaggtaaggctttg
tatgtggatgatttgggaaacgatctgtggtctaccaatttcaagatcattgagttgacg
gtgattcagcggcagaaagacactgcatttgctgaattgttaaacagattgaggaaacgt
tccaaatcaacgcccatgctgccaagtgacaccagtttacttcgaacacgtgaaactggt
gaggagagttcatctttgcacatttttcccacaaatgcacaagttgagactcataatgtt
gagcagctacttaaaacatgtgaagatcatgtcaaaatagatgctcaggattatgaacgc
aacaagaaaacgggaaaacttgaattgaaacggggacatcatgccacagtctttaacacc
actttagctcagcaactggttttaggtgagaacgctcgcgtcatgctgaccaaaaatgta
gacatgatggatggacttgtgaatggggtctgtggcacagtgacacacatagtgaattcc
actggaaataactttccaaaaattgtgtacgttcaatttgatgataaagaggttggcgca
cagactaggggaaatcatgcctgtgcttcaagccacctcttaacctcaacacctattctt
ccccaagaagatagggtcacaaacaaaggtggattacgtcgtcaatttccccttaaactt
tcctgggcttgtacgatacacaaagtacaaggaattactgttgctaacgctgtagtgtcg
cttaaaaaaatatttgctgcaggacaagcatatgtagcattaagtcgcatcacaactttg
tcaggattaattcttcaggactttaaagaagacgccatctattgcaacaacaatgtgcag
gaagcacttcagtgcatgcaaccatttttatgtgcatatagcacaggacacaaatcgtac
acacacaattttagagtgcttttaatgaacgtccaaggtttgccagcacatgtcaaagac
ttgctcctgtccacacagcatttgcagcttaactgtattgctgtgaccgaaacatggctg
actgaaacctctttaaaagagtcagtcaacatcattggttatacatttgacagctgtcct
cgtagtacatcgtacaacagcagacaccccgtgttacttgatttacaagcccaacaacat
gggggtgttgccatgtatactgaagacagcttgtcatacaacattctacaagtaccaaat
gtcaatatagaatgtttagtgtttcactgtgccacctacgacatgctgctagcagtaatt
tacaggccaccgtcgtatgccatgtctttgtttaaagaacatttggaaaaattactttct
tggctggaagaaaggagtaacacgatcactgtcatgggagattttaatgacgacattagg
aagtcgtctacaatttgcgattttatgaccgacaatggctacatccagattgtcacacaa
cctacgactgagaaggggacattgattgaccacgtgtatgttagaactacacagtttgaa
gtggaagcagaagtcgtgccaatgtattttagtgatcacgagggggttgtgtgttctttt
acaactaaaaccttccacaatgtcaaggcataa
DBGET
integrated database retrieval system
