Pungitius pungitius (ninespine stickleback): 119208998
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Entry
119208998 CDS
T07626
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119208998 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119208998 (lamc1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Laminin_B
EGF_LMN_ATRN
Alanine_zipper
DUF6061
PspAA
Motif
Other DBs
NCBI-GeneID:
119208998
NCBI-ProteinID:
XP_037313785
LinkDB
All DBs
Position
15:complement(1730320..1754197)
Genome browser
AA seq
1594 aa
AA seq
DB search
MRSLARALVACCWLAGLVRAAMDECADEQRRAQRCMPEFVNAAFNVTVVATNTCGAPPEE
YCVQTGATGVTKSCHICNARDPRFHHSAAYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKSFDITYVRLKFHTSRPESFAIYKRTSESGPWVPYQYYSGSCVKTYQKAGRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECLKNSGGRLVCNCKHNTDGDD
CNVCKAFYNDRPWRRATADNPNDCLPCDCNGKSSECYFDGELYRATGHGGHCINCADNTD
GPNCERCLDHYHREAGGSRCRPCGCNSVGSESPQCDDRGVCACKPGVTGEKCDRCQPGFH
SLTEAGCRPCSCSPSGSTQECDVNTGQCRCKEHVEGFTCDRCKLGFFNLDPTNPQGCTPC
FCFQHSSVCDSAEGFSVHAVSSSFPRDDEQWTGQQRDGSSVSVQWSPSGQEVSLISEDYF
PMYFVAPEKFLGNQMLSYGQNLSLSFRVDRRDTRLSAEDLVLEGAGLRVAVPLIAQGNAY
PNENMQTYVFRLHDTTDYPWRPTISSPDFQKLLHNLTAIKIRGTYSERSAGYLDDVSLVT
ARRAPGVPARWVERCTCPQGYQGQHCEQCTLGYRRARQELGAFSPCEPCNCNGHSEACDP
DTGACDCRDNTAGLSCERCKDGFYGDATGGSSGDCEPCPCPAGATCAVVPKTREVVCTNC
PAGTTGKRCELCDDGFFGDPLGGGGPVRACRACKCSDNIDPNAVGNCDRETGECLKCIHS
TAGFFCDRCKEGYYGNALAANAADKCKPCSCSPSGTVGGQTNCSQVTGQCECLPNVAQRD
CGVCQPGFFNLQSAAGCERCNCDPIGSTSGQCDITSGQCECQPGVSGRLCQRCEVNFFGF
SSSGCKPCDCDPEGSRSGQCEEDGRCGCRPGFVGARCDMCEENYFYNRSAPGCQQCPSCY
GLVRDKVNQQRQKLQDLQTLIDNLGSGDGSVSDEAFEDRLKEAERSIMELLKEAEASKDV
DRGLLDRLSGINNTLTTQWNRLQNIRGTVDDTGTQADRARHRVREAEGLIERARQELDKA
RDALGKVDIKPPSGTGDPNNMTLLAEEARTLADKHKMDADQIEKIARDANDTSTKAHNLL
LRTLEGESRTSQEVDELNKKYNEAKELAKNLEKQANKVQAEAQDAGDKALKIFANLTSVP
SFDTKALEDEAGKIKKEASDLDKLIDKTEKEYNDLRDDLRGKEQEVRKLLEKGRSEQQTA
DQLLARADAAKALAEEAAKKGQSTFREAENILEDLRDFDKRVNDNKTAAEEALKKIPAIN
ATIAAANEKTRQAEAALGNAAADARDAKSKAEEAERIAATVQKGSAKTKEDAEKAFQDTS
KLDADVGDVMVQLDAAEQELARKKAEADQDMMMAGMASDNAKEAEDNARKAKSAVKTVLS
TITVLLDQLGNIDKVDLSKLNQIDESLKRAKGKMGDSELDRKLTELNEVARSQEVLIDDY
DRQIREIRADILNLNDIKNTLPDGCFNTPILERP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcttggcccgggccctggtggcctgctgctggctggccgggctcgtccgcgcc
gccatggacgagtgcgcggacgagcagcggcgcgcacagcgctgcatgcccgagttcgtg
aacgccgccttcaacgtcacggtggtggcgaccaacacctgcggcgcccccccggaggag
tactgcgtgcagaccggcgccaccggggtcaccaagtcgtgccacatctgcaacgcgcgg
gacccccggttccaccacagcgccgcgtacctgacggactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcggggatccagtaccccaactccatcaacctg
acgctgcacctcggtaaatccttcgacatcacctacgtgcggctcaagttccacaccagc
cgcccggagagcttcgccatctacaagcggaccagcgagtcgggcccctgggtgccctac
cagtactacagcggctcctgtgtgaagacctaccagaaggccggccgcggcttcatccgc
accggagaggacgagcagcaggcgctctgcaccgacgagttcagcgacatctcgccgctc
accgggggcaacgtggccttctccacgctggagggacggcccagcgcctacaacttcgac
aacagccccgtcctccaggactgggtgacagccaccgacatccgggtgaccctcaaccga
ctcaacacgttcggagacgaggttttcaacgaccccaaggtcctcaagtcctactactac
gccatctccgacttcgccgtgggggggaggtgtaagtgtaacggccacgccagcgagtgc
ttaaagaacagcggaggacggctggtgtgtaactgcaaacacaacacggacggagacgac
tgcaacgtctgcaaagctttctacaacgaccggccctggaggagagccaccgccgacaac
cccaacgactgtctgccctgcgactgtaacgggaagagctccgagtgctactttgacggc
gagctgtaccgggccacgggtcacggaggtcactgcatcaactgcgccgacaacacggac
gggcccaactgcgagcgctgcctggaccactaccaccgggaggccggggggagccgctgc
cggccctgcggctgcaactccgtcggctcggagtctcctcagtgtgacgacagaggagtg
tgtgcgtgtaaacccggagtcaccggagagaagtgtgaccgctgccagccggggttccac
agcctgaccgaggccggctgcaggccttgctcctgttccccctctggcagcactcaggag
tgtgatgtgaacacaggacagtgtcgctgcaaagagcacgtggagggcttcacctgcgac
aggtgtaaactgggtttcttcaacctggatcccaccaaccctcagggctgcaccccctgc
ttctgcttccagcactcgtctgtgtgtgacagcgccgagggcttcagcgtgcacgccgtc
agctcctccttccccagggatgatgagcagtggaccggacagcagcgcgatggttccagt
gtctccgtccagtggtctcctagtggacaggaagtgtccctcatctcagaggactacttt
cccatgtactttgttgccccagagaagtttctggggaaccagatgctcagttacggacag
aacctgagtctgagcttccgggtggaccggcgggacacccgcctgtcggcggaggacctg
gtgctggagggggccggcctccgggtggcggtgcccctcatcgcccagggcaacgcctac
cccaacgagaacatgcagacatacgtcttcaggcttcacgacaccacagactatccctgg
aggccgaccatcagctcccccgacttccagaagctcctccacaacctgaccgccatcaag
atccgtgggacctacagcgagaggagtgccggttaccttgacgacgtctccttggtaacg
gccaggcgggccccaggtgtaccggcccgctgggttgagcgctgcacctgtcctcagggt
taccaggggcaacactgtgagcagtgcaccctgggataccgacgcgctcgacaggagctg
ggagctttcagcccgtgtgagccgtgcaactgtaacggacacagcgaggcctgcgacccc
gacacgggggcgtgcgactgtcgtgacaacacagccggcctcagctgtgagcgctgcaaa
gacggtttctatggcgacgccaccggcgggtcgtctggagactgtgagccgtgtccctgt
cccgccggggccacctgcgctgtggtccccaagacccgggaggtggtctgcaccaattgc
cccgcaggaaccacagggaagcgctgcgagctctgcgacgacgggttcttcggagacccc
ctggggggcggcgggccggtccgagcctgccgcgcctgcaagtgcagcgacaacatcgac
cccaacgccgtcggcaactgcgaccgcgagaccggcgagtgcctgaagtgcatccacagc
accgccggcttcttctgcgaccgctgcaaggagggttactacggcaacgccctggccgct
aacgccgcagacaagtgcaaaccctgctcctgctctccgtccggtaccgttgggggacag
acgaactgctctcaggtcaccggtcagtgtgagtgtctccccaacgtggcgcagagggac
tgcggcgtctgtcagcccggcttcttcaacctgcagagcgccgccggctgtgaacggtgc
aactgcgaccctattggctccaccagcgggcagtgtgacatcacctcggggcagtgcgag
tgccagcccggcgtctcgggtcggctctgccagcgctgcgaggtcaacttcttcggcttc
agctcgtcgggatgcaaaccctgcgactgcgaccccgagggctcccggtccggtcagtgc
gaggaggacgggcgctgtgggtgccggcccggcttcgtgggcgctcgctgcgacatgtgt
gaggagaactacttctacaaccgctcggcgccgggctgccagcagtgtccctcctgctac
ggcctggtcagggacaaggtgaaccagcagaggcagaagctccaggacctgcagaccctc
atcgacaacctgggctcaggggacggctcggtcagcgacgaggccttcgaggaccggctg
aaggaggcagagaggtccatcatggagcttctgaaggaggctgaggccagcaaagacgtg
gaccgcggcctgctggaccgcctgagcggcatcaacaacacgctgacgacgcagtggaac
cggctgcagaacatccgcggcacggtggacgacacggggacgcaggcggaccgcgcacgc
caccgcgtccgggaggccgagggcctgatcgagcgagcccgccaggagctggacaaggcc
cgggacgcgctcggcaaagtggacatcaaaccgccgagcggcacgggggacccgaacaac
atgacgctgctggccgaggaggccaggacgctggccgacaagcacaagatggacgccgac
cagatcgagaagatcgccagagacgccaacgacacgtcgaccaaagcgcacaacctgctg
ctgaggactctggaaggagagagcaggacgagtcaggaggtggacgagctcaacaagaag
tacaacgaggccaaggagctggccaagaacctggagaagcaggccaacaaggtccaggcc
gaggcccaggacgccggggacaaagccctgaagatctttgccaacctgaccagcgtcccc
tcgtttgacaccaaagctctagaggatgaagcgggtaagatcaagaaggaggcgtcggac
ctggacaagctcatcgacaagacggagaaggagtacaacgacctgagagacgacctgagg
gggaaggagcaggaagtgcgcaagctgctggaaaaagggaggagcgagcagcagactgca
gaccagcttctggcccgagccgacgccgccaaagctctggctgaggaagcggcgaagaaa
ggacagtccaccttcagagaggccgagaatatcctggaggacctcagagacttcgacaag
cgggtcaacgacaacaagacggcggccgaggaggccctgaagaagatccccgccatcaac
gccaccatcgcggcagccaatgagaagacgcggcaggcggaggcagctctcggcaacgcg
gccgccgacgcccgagatgcaaagagcaaggcggaggaggcggagaggatcgccgccacc
gtgcagaagggctcggccaagaccaaggaggacgcggagaaggccttccaggacaccagc
aagttggacgcagacgtgggggacgtgatggtccagctggacgccgccgagcaggagctg
gccaggaagaaggcggaggccgaccaggacatgatgatggcgggaatggcgtccgacaac
gccaaggaggccgaggacaacgcccgtaaggccaagagcgccgtgaagacggtgctgagc
accatcaccgtcctgctggaccagctgggaaacatcgacaaggtggacctgagcaagctg
aaccagatcgacgagtccctgaagcgggccaaggggaagatgggcgacagcgagctggac
aggaagctgacggagctgaacgaggtggcgaggagtcaggaggttctgatcgacgactac
gaccggcagatccgagagatccgcgccgacatcctgaacctcaacgacatcaagaacacg
ctgcccgacggctgcttcaacacgcccatcctggagcggccttag
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