Pungitius pungitius (ninespine stickleback): 119209009
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Entry
119209009 CDS
T07626
Symbol
slc6a4a
Name
(RefSeq) LOW QUALITY PROTEIN: solute carrier family 6 member 4a
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119209009 (slc6a4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119209009 (slc6a4a)
Transporters [BR:
ppug02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
119209009 (slc6a4a)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
119209009
NCBI-ProteinID:
XP_037313833
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Position
3:complement(3153701..3167272)
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AA seq
658 aa
AA seq
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METTDLMLTSMLTMDRGENGGEAGRGEEENGRLTQAGERGPKSPSAGSAPQVSNGFTTPT
PQSAREGAGSAAGAAPEPGAGAAGASAPPGGLRTLVVQQISSERPRETWSKKMDFLLSVI
GYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYMELALGQFHRSGCISIWKH
ICPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRPTLPWTTCTNSWNTVNCNRYM
STDHNVSWSNSSTXPAEEFYTRQVLQVHLSPGLHQLGSVSWQLALCLLFIFIIVYFSIWK
GVKTSGKVVWVTATFPYLVLLVLLVRGATLPGAWRGVVFYLKPDWQKLLSTTVWIDAAAQ
IFFSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTSFLSGFVIFTVLGYMAEMRHQ
DVGAVAKDAGPSLLFIIYAEAIANMPAATFFSIIFFLMIIMLGLDSTFAGLEGVITAMLD
EFPHVLAKRREWFVLGLVCVCFLGALSTLTYGGAFVVKLFEEYATGPAVITVVLLEVIAV
SWFYGTNRFCNDIHLMLGFYPGFFWRICWVAICPCFLLFIIISFLAFPPEVRLFNYHFPP
WTTVLGYCIGVSSFICVPVYMVYYLLRAKGTFKQRLLKSITPEPSSNQHGHLIVTNAV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggagacgacagatctgatgctgacgagcatgttgacgatggacagaggggagaacggg
ggggaggcggggaggggggaggaggaaaacggcaggctgacgcaggccggcgagagagga
cccaagagcccgagcgccggctccgcgccgcaggtgtccaacggcttcaccacgcccacc
cctcagagcgccagggagggggcggggagcgcggcgggggccgcccccgagcccggagcg
ggcgccgccggggcctcggcgccgccgggaggcctcaggactctggtggtccaacaaatc
agctcggagaggccccgagaaacctggagcaagaagatggacttcctgctctctgtgatc
ggctacgcggtggatctggggaacgtctggcgcttcccttacatctgctaccaaaatgga
ggaggtgcctttttgctgccctacctgttgatggccgtgttcggaggggtcccgctgttc
tacatggagctggcgctgggccagttccaccgcagcggctgcatctccatctggaagcac
atatgccccatcttcaaagggatcggcttcgccatctgcatcatagccctctacatcgcc
ttctactacaacaccatcatggcctgggccctgtactacctgctgtcgtcattccggccc
accctgccctggaccacctgcaccaacagctggaacacggtcaactgtaaccgctacatg
tccaccgaccacaacgtgtcctggtccaactcctccaccntccccgccgaggagttctat
actcgccaggtgttgcaggtccacctctccccaggtctgcaccagctgggctctgtcagc
tggcagctggccctctgcctgctcttcatcttcatcatcgtctacttcagcatctggaaa
ggagtcaagacgtctggaaaggtggtctgggtgactgctacctttccctacctggtcctc
ttggtgctgctcgtccgtggggccactctgccgggggcctggaggggcgtcgtgttctac
ctcaaacctgactggcagaagctcctgagcaccacggtgtggatcgacgcagcggctcag
atcttcttctcgctggggccggggttcggcgtgctcctcgccttcgccagctacaacccg
tttcacaacaactgctacaaagatgctctgatcaccagctccgtcaactgcctgaccagc
ttcctgtccggctttgtcatctttaccgtgctgggctacatggcagagatgaggcatcag
gacgtgggtgctgtggccaaggatgctggtcccagtctgctgttcatcatctatgcagaa
gccatagcaaacatgcccgccgccaccttcttctccatcatcttcttcctcatgatcatc
atgttgggtctggatagcacgttcgccgggttggagggggtgatcaccgccatgctcgac
gagttcccccatgtcctggccaagaggcgagagtggttcgtcttgggcctggtgtgcgtc
tgcttcctcggggccctctccacgctcacatacggaggagcgttcgtggtgaagctgttt
gaggagtacgccacgggccccgcggtcatcaccgtggtgcttctcgaggtcatcgccgtt
tcctggttctacggtaccaaccggttctgtaatgacatccatctcatgcttggtttctac
ccggggttcttctggaggatctgctgggtggccatctgcccctgcttcctgctgttcatc
atcatcagcttcctggccttccctccggaggtcaggttgttcaactaccacttcccgcca
tggaccactgtcctgggctactgcatcggggtgtcttcgttcatctgtgtgcctgtttac
atggtctactacttgctcagagccaagggaaccttcaaacagcggctgctgaagagcatc
acgccagagcccagcagcaaccagcacggacacctcatcgtcaccaacgccgtgtga
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