KEGG   Pungitius pungitius (ninespine stickleback): 119209087
Entry
119209087         CDS       T07626                                 
Symbol
pafah1b1a
Name
(RefSeq) lissencephaly-1 homolog A
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug00565  Ether lipid metabolism
ppug01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    119209087 (pafah1b1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ppug03036]
    119209087 (pafah1b1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppug04147]
    119209087 (pafah1b1a)
Chromosome and associated proteins [BR:ppug03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    119209087 (pafah1b1a)
Exosome [BR:ppug04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119209087 (pafah1b1a)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_EML Beta-prop_Vps41 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_RFWD3 LisH LisH_PAC1 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_RIG_1st Pox_A_type_inc Nucleoporin_N Beta-prop_NUP159_NUP214 DUF2570 ARMC9_LisH LisH_2 SutA-RBD
Other DBs
NCBI-GeneID: 119209087
NCBI-ProteinID: XP_037313988
LinkDB
Position
3:complement(7507718..7533245)
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDNNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVSQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVASKDCKAELREHEHVVECISWAPESAHPTIQDATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSIGLCLMTLVGHDNWVRGILFHPGGKFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDFHKAAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcgcaacggcaacgggacgaactaaatcgagcgatagccgattatctacgt
tccaatggatatgaagaagcatactccactttcaagaaggaggcggaattagataataat
gaagaattggataagaagtatgccggccttttggaaaagaaatggacctctgtcattaga
ttacaaaaaaaggtgatggagcttgaatccaaactgaatgaagcaaaggaggagatcacc
ctgggtgggcccgtgagtcagaagcgcgaccccaaagagtggatcccacgcccacctgaa
aggtacgcgctgagtggccaccgcagtccggtcacccgcgtcatcttccacccagtcttc
agtgtcatggtgtctgcgtccgaggatgcaacaataaaggtgtgggactatgagacgggg
gactttgagcgcacactgaagggccacacggattcagtgcaggacatctcctttgaccag
accggcaaattgctagcgtcctgctctgcagacatgactatcaagctgtgggatttccag
ggcttcgagtgcatccggaccatgcatggacacgaccacaacgtttcgtctgtagccatc
atgcccaatggagatcacatcatttctgcctcaagggacaaaaccatgaaaatgtgggag
gtggccacaggctactgcgtgaagaccttcacaggccaccgggagtgggtccgtatggtt
cggcccaatcaggacggcacgctgatcgccagctgctccaacgaccaaacggtgcgagtg
tgggtcgtggcctccaaagactgcaaggcggagttgcgggagcacgagcacgtggtggag
tgcatctcctgggcaccagagagcgcccaccccaccatccaggacgccacaggctcagag
acaaagaagagcggtaagccgggcccgttcctgctgtctggctccagagacaaaaccatc
aagatgtgggatgttagcattggcttgtgccttatgacactggtcggccatgataactgg
gtgcgtggaatcctcttccaccccggaggcaagtttattgtgtcctgtgcggatgacaag
accttaaggatctgggactacaagaacaagcgctgcatgaaaaccctgtgtgcccatgaa
cactttgttacctctctggatttccacaaggctgctccctacgtggtcactgggagtgta
gatcaaacagtaaaagtgtgggagtgccgctga

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