Pungitius pungitius (ninespine stickleback): 119209153
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Entry
119209153 CDS
T07626
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
ppug03015
mRNA surveillance pathway
ppug03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119209153 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
119209153 (acin1a)
03015 mRNA surveillance pathway
119209153 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119209153 (acin1a)
03041 Spliceosome [BR:
ppug03041
]
119209153 (acin1a)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119209153 (acin1a)
Spliceosome [BR:
ppug03041
]
Complex C
Other components
EJC/TREX
119209153 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
HeH
Motif
Other DBs
NCBI-GeneID:
119209153
NCBI-ProteinID:
XP_037314129
LinkDB
All DBs
Position
15:13865670..13879753
Genome browser
AA seq
1690 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALVKRLKGALMLENLQRTSTAN
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYDTNEPEDHIEVNNSTSCP
PQAQDATPALAEQHKPPGPSGVDNLFAAVNKEEGNRNQEADMSGPPASGSMAVGVSDSEP
RPEKVSAYKAAPADSDDDDSEDGEEDGGDDDDDWESGARRRSHREPARAPTTRERSGASC
QPPQQHMPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAQPRRSSSTSSSGSS
SSGSRSSSPEPQRSGHAERKPGPLTLLARKMESEGAFSGAGWHHAGGEGERQDGSSLAAS
FPGRGPLEGLVSAITHTANTAGHVSFPTIPGINQGIPGAHSAHIQLPVGVCKATATEERD
SEIDRERALELERQRKLEEEQAMEEERERAFALEREERQRALEKERMERQQALEREEREK
ALQRERELALERERQERELALAREREERERALAQERAREMEIARQKELERQRALEQERQE
RERREREEMERARELERAKALDQEKERERALEQERLQRERALEAERKEKERIEREKALEQ
ERLERERLERQRALEQERLEREKAFEQQRVEMERALEKERLEREKALERERLERDKALEI
EQLERARALERERLEIEKALEKERLERENALEQERLERERALEQEKLKQQRLELERKENE
RIEREKALERERIEKEKALEREREEKERLAREAAQEEERERALQQEKLERERKEKERALE
HEKLEKEKAMQKEKEDMETERARMAERERESHLPPSKRGRDIALTPMSTPLPLSVGPGRK
SSTKLGEQEDDHASKSQVEADEQSATMSPTPPVPQSSFKKFRFLRDSPIQLQSSSPSMVI
KRPRNFSDTPQPQASPGSSHIDGGKRHEEGLLSSTEQEGPQKVTKQEVVVTGHVGGVLEK
VTTLVPVPEKDGAKSSVSEDKEKEYTSKVDESHPTNPLDSAQRRGRDAKKKKEEEQKQTR
QRSTSNDSSSSESDSGSSSSGSSGSSSSSQEKTISTTRGRLEGKPDRDTSPQHRMTRHAK
AKGLKESPKASPCKRDTSVEKSKPAADGETPTKKTIMGAPTREESQKKRMNKEEEEETDK
KRQVKETAMAQPEKLPETNEETPKAFSARKISINSSKMSPGTGSAEGEQDPGAAAGRKRR
WGSSTAVTAKKPSISITTDSLKSLIPDIRPSLGQEAVVDLHPEQAVLSGPEDEEREQSDQ
DLQIRRTVTQVVHLESQENGQETKKNEDSEEEDPQGDGERTRVHSDKMDASFPGAMETQS
PSHTSHDVESNTVTPSDTLIRRSISQQKTGVSITIDDPVRSARKPSPPRGKVSNIVHISN
LVRPFTLGQLKELLSRTGTLVEEGFWIDKIKSHCFVTYCSPEEAVATRSSLHGVKWPQSN
PKVLRVDFCQKDELDFHKGLADRPAAEDQGPGATRGRPPGLPSLFPERDQWAEREREMER
REKGRAEREWDRDKVREFGKPGEEKEGGPPRSHSRERRRKERGKSKDKKTEKKEKPAEDP
PAKLLDDLFRKTKATPCIYWLPLTDEEFVQREAARADRMKEREKRRKEQDEEKEKKREEE
RKERMKAGGVSTGERSEGEKEKDRDRERDRDRGRDRENDKRRDGYRRPEGRGEDGGRRSR
SRSDPRERRR
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacgggagaccgctccagtcccttcgagtagcg
gatttaaaagctgctcttgaagagaggggactgtcgaaaagtgggcagaagaatgctctc
gttaaaagactcaaaggggcactcatgcttgagaatcttcagaggacctccaccgctaac
attggactgcagccaaactcacagattggtgaggaaatgagccaaaacagctttatcaag
cagtatctggctaaacaacaggagctcctgaggcagcggctggaaagagaggcccgcgaa
gcatacgacacaaatgagccggaggaccacatagaagttaataacagtacatcatgccct
cctcaagcccaggatgccacgccagcattggctgagcagcacaagccgcccggcccgtct
ggtgttgacaatttgtttgctgcagtgaacaaggaagagggcaacaggaaccaggaggct
gacatgtccggtcctcccgcttctggctctatggccgtaggcgtctctgacagcgagccc
cggccggagaaggtgtctgcctacaaagcagcccctgccgacagtgacgacgacgatagt
gaggatggcgaggaggatgggggcgacgacgatgatgattgggaaagcggtgctcggagg
agaagccacagagagccggccagagcgcccacaacgagagagaggtctggagcatcctgt
caacccccgcagcaacacatgccctcccttttgtcccctcaactccgccagccaactcct
cctccatccccacctccagagctgtctttccccctgcctgacaccccgaaacagagcccc
ccgagtccagatgtagcccagcctagacgctcatcgagcacctccagctctgggtcctcc
agcagcggcagccgcagtagcagcccagagccccagagaagtgggcacgccgagcgcaag
ccgggcccgctgacccttctggcacgtaaaatggagtcagaaggggctttctccggagca
ggttggcaccacgccggtggggaaggtgaaaggcaagacggaagttctcttgccgcatct
tttcctggtagagggcctttggagggtctggtatctgccatcactcacacagccaatact
gccggccacgtatcgtttcccacaattccaggcattaaccagggtatcccaggtgcacat
tcggctcatattcaactacctgttggtgtgtgcaaagccactgcaacagaagagagggac
tctgaaatagatagagaacgggccctagagctggagaggcagaggaaacttgaggaggaa
caagcaatggaagaagaacgggaaagagcttttgcgctggagagagaggaaagacagagg
gctcttgagaaagagagaatggaacgacagcaggccttggaaagggaagaacgcgagaag
gctttgcagcgggagagagaactcgcccttgaacgagagagacaggagagagagctagct
ttggccagggagagggaagagcgtgagcgagccttggctcaagaaagggcccgggagatg
gagatagcaaggcagaaggagctcgagagacagagggccctggagcaggagcgtcaggag
agagagaggcgagaaagagaagaaatggagagagcaagggagctagagagagctaaggcc
ttggatcaggagaaggagagagaaagggcgcttgagcaggaaaggcttcagagggagaga
gctctggaggctgagagaaaggagaaggagaggattgagagggaaaaggctctggagcag
gagaggttggaaagggaaaggttggagagacagagagccttggagcaagagagactagag
agagagaaagcctttgagcaacagagagtagaaatggagagagccctggagaaggagcga
ctagagagagagaaagccctagagagagagcgtttagagagagacaaagccttggaaata
gagcaactagagagagcgagagccctagagagagagcgtttagagattgagaaagccttg
gaaaaagagcgactagagagagagaacgctttggagcaagagcgactagaaagagaaaga
gctctagagcaagaaaaattgaagcagcagaggttagagcttgagaggaaggaaaatgaa
agaattgagagggagaaagcattggagcgagaaaggatagagaaggaaaaggccttggaa
cgagaaagggaggagaaagaaagattggcaagagaggcagcacaggaagaggagagggag
agagctctgcagcaggagaagcttgaaagggagaggaaggagaaagagagggctctggaa
catgagaagctagaaaaggagaaggccatgcagaaagaaaaggaggacatggagacagag
agagcacggatggctgaaagggagagggaaagtcacctccctccgtccaagcgcggccgt
gacatcgctctcacccccatgtccacacctctccccctttctgtcggaccaggtagaaag
tcctcaacaaaattgggagagcaggaagatgaccatgcttcaaagtcccaagttgaagca
gacgaacagagcgccaccatgtctccaacgcctccagtgcctcaatcctcctttaagaag
ttccggttcctaagggacagcccaattcagctccaatcttcctccccttccatggtcatt
aagcgccctcgtaacttctctgatactccccagccccaggcttcacctggctcttcccac
atcgacggtgggaaacgccacgaggaaggactcctgtcctccactgaacaggaaggccca
cagaaggtgacaaaacaggaggtcgttgtcacaggacatgtgggtggcgttctggagaag
gtaaccacacttgtcccggttcccgaaaaagatggggcaaaatcctctgtgtccgaggac
aaagaaaaggaatacaccagtaaagtggatgaaagccatcctacaaacccactggacagc
gcacagcgtagaggaagagacgcgaagaagaagaaggaggaggagcagaagcaaacaaga
caaagatcaacgtctaatgattcctcttcctcagaatcagactctgggtcctcatcttct
gggtcgtctggctcatcctcatcctctcaagagaaaactatctccactacaagaggcaga
ctggaagggaaacctgacagagatacctcaccacagcacaggatgacacgacatgcaaag
gccaagggtttaaaggaaagtccgaaagcctccccttgtaaaagagacacgtctgtagag
aagagtaaaccagctgctgatggagagactcccaccaagaaaacaatcatgggagcacca
acaagagaagagtcacaaaaaaagaggatgaacaaggaggaagaagaggaaactgacaaa
aaaaggcaggtgaaagagactgctatggcacagccggagaagcttccagagaccaacgag
gagacgccaaaggccttttcagctcgtaagatctctatcaacagcagtaaaatgtcccca
ggcactggcagtgcagagggcgagcaggacccaggggctgcagccggtcgcaagaggagg
tggggctccagcacagccgtcactgccaagaaaccttccatcagtatcaccaccgattca
ctcaagtccctgatcccagacattcgcccgagtctcgggcaggaagcagtcgtggacctg
cacccagagcaagcagtcctctccgggccagaggatgaagagagggagcagtctgaccaa
gaccttcagattcgacgtactgtcacacaggtggtgcacttggagagtcaggagaatgga
caggagacaaagaagaatgaagattcggaggaagaggacccgcagggagatggggaaagg
accagggtgcacagcgacaagatggatgcctcgttccctggagccatggaaacccagtct
ccgtcacacaccagccatgatgtagaaagtaacactgtgacccccagcgacactctcatc
cgtcgctccatcagccagcagaaaactggtgtctccatcacaatcgatgaccctgttcgc
tcggcccggaagccctcgccacctcgaggcaaagtctccaacattgttcacatcagcaac
ctggtgagaccgttcaccctggggcagcttaaggagctgctcagcagaaccggcaccctg
gttgaggagggcttctggatagacaaaatcaagtctcactgctttgtcacctactgtagc
ccagaggaggccgttgccacacggtcatctcttcatggggtgaaatggcctcagagcaac
ccaaaagtccttcgcgttgacttctgccagaaggatgagctggacttccacaaaggcttg
gcagaccgtcccgcggcagaggaccagggtcccggagccacccgcggtcggcctccgggc
ctgccctctctcttccccgagcgcgaccagtgggccgagcgcgagcgagagatggagcgg
cgggagaaggggagagcagagcgggagtgggatcgcgacaaggtcagagaatttgggaaa
ccgggtgaagagaaggagggaggtcctcccaggtcacactccagggagagacgccgcaag
gagaggggaaagagcaaggacaagaagactgagaagaaagagaaaccggctgaggatccc
cctgcaaagctgcttgatgatttgttccgcaaaactaaagcgactccttgcatatactgg
cttccacttacagatgaagagtttgttcaacgggaagctgcccgagcggaccggatgaag
gagcgtgagaaacggaggaaggagcaagatgaagagaaggagaaaaaaagggaagaggag
cgcaaggaaaggatgaaagctggaggtgtgtcaactggagagcgcagtgagggggagaag
gagaaggacagggacagagagagggacagagaccgagggagggacagggagaatgacaaa
cgcagggatggctaccgtagaccagagggccgcggggaagacggggggcgacgctctcgc
agccgcagcgacccgcgagaaaggcgacgttaa
DBGET
integrated database retrieval system
